BAC Information

Click to search

BAC

Clone NameB6Ng01-104G17
Chromosome13 (Build37)7 (Build37)
Map Location 91,055,365 - 91,055,456106,491,485 - 106,492,623
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneXrcc4, Tmem167, LOC100043170, LOC624190, EG435376
Downstream geneRps23, Atg10, LOC100042959, Ssbp2, LOC666889, Acot12, Zcchc9, Ckmt2, Rasgrf2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104G17.bB6Ng01-104G17.g
ACCDH912725DH912726
length3721,121
definitionDH912725|Mus musculus domesticus DNA, BAC clone: B6Ng01-104G17, 5' end.DH912726|Mus musculus domesticus DNA, BAC clone: B6Ng01-104G17, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(91,055,365 - 91,055,456)(106,491,485 - 106,492,623)
sequence
gaattcagatatctgcttgcctttgtaagcacaaacaataagctaactgg
gtgagatcctgtcctgagattatcattcccaccatacctgggcccaaatt
agctctgtccttggctgaccttgaactcaggactctgcctacctttgtat
ctttctaacaagctggctctttagtatagctgcctctgttcttttaggtc
catgaagcccttcatacaattcacattgcatccttgtattttgcacagtt
gagaaattacttttaaaaaattaatttatgatatgtgagtactctgtagc
tgtcttcagccgtacaagaagagggcatcagatctcattacagatggttg
tgagccaccatgtggttgctgg
gaattccttacagagaaagagagaacctgtcggctagtttcacaccaagt
gacaactatgttctcatgagaacaacgtatctagaatggcctgactaaaa
gtcaccattagcccaggctcagagcggtgccctgtcattctctaagaact
ctgtcaatccatacaaacacaggaataaaggtaatgtgacagaaaccact
cgctgagggcaggtgaactggctcactaggtaaaagcctggcaaagcctg
ctgacctgagtttgatctctagaacccacataaagttgttcttaacctct
gcatgtgcacctgtgtacacacacacacacacacacacacacacacgaca
aacatatttaaaaaagaaaatccctggatctttcacgtctttcatgatgg
caatgtctgtgatttccccaagaccccatctttcctgctgatttattgca
ctcgtgagaaggaaagacttggggtgggggtcttttagataatattttct
accatgacatttattgcacaggcatggcagtacataagttccagtaggaa
ctgagcctgtaagttccaaggcctggacttgggccctatccacctgcgtg
cagtggcattctgggggcttgggaattaacatcagagggtttgacctctc
acccctgcagaatctgtagactgtcccttcagagtgcaagtggctaggga
ccctctgtgttcagaagagctaattacagtgtgcatctgggggcaactga
agggcctggcagcatgctggtagggactcaagacctctttcagagctcgt
catccttctgcatgccaggcctgcaaggacttggtctgtgctccatcgga
ggttgaggacctcagcgtgcatcttagcaaaggctggtcacactggccac
ttccctgaccagttgtctatggaatcatctttctaaaaaccccgtgggtc
agatgatgctgatggcctttgaggatgtggtcaaatgctgcttctgtctt
ctgagaattcatcactttcattgactcaggagcttttttctgaagaaagt
tccttctgcctcatgggccctcaagaaaagaactattttcaagaagtccc
tcctgatgagtttcggagtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_91055365_91055456
seq2: B6Ng01-104G17.b_326_417 (reverse)

seq1  CCAGCAACCACATGGTGGCTCACAACCATCTGTAATGAGATCTGACACCC  50
      |||||||||||||||||||||||||||||||||||||||||||||  |||
seq2  CCAGCAACCACATGGTGGCTCACAACCATCTGTAATGAGATCTGATGCCC  50

seq1  TCTTCTGGAGTGTCTGAAGACAGCTACAGTGAACTCACATAT  92
      |||||| |   | |||||||||||||||| | ||||||||||
seq2  TCTTCTTGTACGGCTGAAGACAGCTACAGAGTACTCACATAT  92

seq1: chr7_106491485_106492623
seq2: B6Ng01-104G17.g_68_1188

seq1  GAATTCCTTACAGAGAAAGAGAGAACCTGTCGGCTAGTTTCACACCAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTACAGAGAAAGAGAGAACCTGTCGGCTAGTTTCACACCAAGT  50

seq1  GACAACTATGTTCTCATGAGAACAACGTATCTAGAATGGCCTGACTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACTATGTTCTCATGAGAACAACGTATCTAGAATGGCCTGACTAAAA  100

seq1  GTCACCATTAGCCCAGGCTCAGAGCGGTGCCCTGTCATTCTCTAAGAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCATTAGCCCAGGCTCAGAGCGGTGCCCTGTCATTCTCTAAGAACT  150

seq1  CTGTCAATCCATACAAACACAGGAATAAAGGTAATGTGACAGAAACCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAATCCATACAAACACAGGAATAAAGGTAATGTGACAGAAACCACT  200

seq1  CGCTGAGGGCAGGTGAACTGGCTCACTAGGTAAAAGCCTGGCAAAGCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGAGGGCAGGTGAACTGGCTCACTAGGTAAAAGCCTGGCAAAGCCTG  250

seq1  CTGACCTGAGTTTGATCTCTAGAACCCACATAAAGTTGTTCTTAACCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTGAGTTTGATCTCTAGAACCCACATAAAGTTGTTCTTAACCTCT  300

seq1  GCATGTGCACCTGTGTACACACACACACACACACACACACACACACGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTGCACCTGTGTACACACACACACACACACACACACACACACGACA  350

seq1  AACATATTTAAAAAAGAAAATCCCTGGATCTTTCACGTCTTTCATGATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATTTAAAAAAGAAAATCCCTGGATCTTTCACGTCTTTCATGATGG  400

seq1  CAATGTCTGTGATTTCCCCAAGACCCCATCTTTCCTGCTGATTTATTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTCTGTGATTTCCCCAAGACCCCATCTTTCCTGCTGATTTATTGCA  450

seq1  CTCGTGAGAAGGAAAGACTTGGGGTGGGGGTCTTTTAGATAATATTTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTGAGAAGGAAAGACTTGGGGTGGGGGTCTTTTAGATAATATTTTCT  500

seq1  ACCATGACATTTATTGCACAGGCATGGCAGTACATAAGTTCCAGTAGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGACATTTATTGCACAGGCATGGCAGTACATAAGTTCCAGTAGGAA  550

seq1  CTGAGCCTGTAAGTTCCAAGGCCTGGACTTGGGCCCTATCCACCTGCGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCCTGTAAGTTCCAAGGCCTGGACTTGGGCCCTATCCACCTGCGTG  600

seq1  CAGTGGCATTCTGGGGGCTTGGGAATTAACATCAGAGGGTTTGACCTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGCATTCTGGGGGCTTGGGAATTAACATCAGAGGGTTTGACCTCTC  650

seq1  ACCCCTGCAGAATCTGTAGACTGTCCCTTCAGAGTGCAAGTGGCTAGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTGCAGAATCTGTAGACTGTCCCTTCAGAGTGCAAGTGGCTAGGGA  700

seq1  CCCTCTGTGTTCAGAAGAGCTAATTACAGTGTGCATCTGGGGGCAACTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTGTGTTCAGAAGAGCTAATTACAGTGTGCATCTGGGGGCAACTGA  750

seq1  AGGGCCTGGCAGCATGCTGGTAGGGACTCAAGACCTCTTTCAGAGCTCGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCTGGCAGCATGCTGGTAGGGACTCAAGACCTCTTTCAGAGCTCGT  800

seq1  CATCCTTCTGCATGCCAGGCCTGCAAGGACTTGGTCTGTGCTTCCATCGG  850
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CATCCTTCTGCATGCCAGGCCTGCAAGGACTTGGTCTGTGC-TCCATCGG  849

seq1  AGGTTGAGGACCTCAGCGTGCATCTTAGCAAAGGCTGGTCACCACTGGCC  900
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGGTTGAGGACCTCAGCGTGCATCTTAGCAAAGGCTGGTCA-CACTGGCC  898

seq1  ACTTCCCTGACCAGTTGTCTATGGAATCATCTTTCTAAAGACCCCCGTGG  950
      ||||||||||||||||||||||||||||||||||||||| | ||||||||
seq2  ACTTCCCTGACCAGTTGTCTATGGAATCATCTTTCTAAA-AACCCCGTGG  947

seq1  GTCAGATGATGCTGATGGCCTTTGAGGATTGTGGTCCAGAGTGCTGCTGC  1000
      |||||||||||||||||||||||||||| |||||||   | ||||||| |
seq2  GTCAGATGATGCTGATGGCCTTTGAGGA-TGTGGTC--AAATGCTGCTTC  994

seq1  ATGTCCTCCTGAGATTTCATCACTTCCATTGACATCATGGAGCTATTTCC  1050
       ||| || |||||| |||||||||| ||||||| ||| |||||| ||| |
seq2  -TGT-CTTCTGAGAATTCATCACTTTCATTGAC-TCA-GGAGCTTTTTTC  1040

seq1  ATGAAGATAGCTTCCTCCTGCCTCACGGGCCCTCACAGAACACAGCAACC  1100
       |||||| || ||||| |||||||| ||||||||| |||| |     | |
seq2  -TGAAGAAAG-TTCCTTCTGCCTCATGGGCCCTCA-AGAAAA----GAAC  1083

seq1  TATTTCAGAGATGTCCCTCCCTGATGTGTTTCGGAGTGC  1139
      |||||   ||| |||||| ||||||| ||||||||||||
seq2  TATTTTCAAGAAGTCCCT-CCTGATGAGTTTCGGAGTGC  1121