BAC Information

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BAC

Clone NameB6Ng01-106B18
Chromosome13 (Build37)
Map Location 108,729,727 - 108,876,854
singlet/doubletdoublet
Overlap gene3021401N23Rik, 2810008M24Rik, Ndufa12l
Upstream geneDimt1, Kif2a, LOC100040322, LOC100040350, LOC100040366, Apoo, AI197445, LOC100040820, Zswim6
Downstream geneErcc8, LOC668123, LOC621498, Elovl7, LOC668129, LOC100040524, Depdc1b, Pde4d, EG668144, LOC621663
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106B18.bB6Ng01-106B18.g
ACCDH913940DH913941
length4721,168
definitionDH913940|Mus musculus domesticus DNA, BAC clone: B6Ng01-106B18, 5' end.DH913941|Mus musculus domesticus DNA, BAC clone: B6Ng01-106B18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(108,729,727 - 108,730,204)(108,875,688 - 108,876,854)
sequence
agtgttgcaagtatttcttccactgtcttttaacttacttgcagtatttt
tgtggctatttttgaatgtttgtttttaaatacaagtagcgcttgactca
attttgacatgttaaaaaaacaatacatttgaaaaaccaatggttgtttt
gtcaattttcttttcctttttcctttttcctttttcctttttcctctctc
tctctctctctctctctctctctctctctctctctttctctctctctctc
acagtttttaaatggctcccaatttcagactagacctgaggctgtcttca
ttggcattagatggcatagtgtgccaccttcaattatatccggggtctgc
attatagactaggtctatcagatccaataatggactctggtttggtgcag
agtccagacttagttctactactcctggccaactatatatgccttcacac
atataaaagcaatggcctgagc
gaattcctaaaaccttttgaataagaataaggctgggagattaaaagata
taaacctgtcttttttatcaggacaatttactgctgagatacgttagaat
ttaagaacggacaaaaaaaatggaactgatatttcactgttgtaaatctc
tcaacctttcgtgaatcgctggctgggatataaactagtacaacggcttt
gggaaatagtttgtctttataaatatgaacgtccagctaccctacagctt
agaaattctgctaggtatttgcccagagacataataaagacatgtgtcta
cccacctaaatacttgtcccaaattctctgtagaagcttcagttacttac
gtcatagtgacttaaaacagaaagtcctatttctgtgcccagtagtacaa
gaatgagctgatgatgtgctgtttccattgctctgtgtaagtacaccaaa
ctctagctactccaaacagcatgtgtttcttaccccaggctcagctcagc
cggcttctctaatgaggatcctgagatactgtgatcagggtgccagccag
gcagtgttccgcctccccacctgggtgattattggcagcgctcagttcct
tgcagttttaggactcagcttaagtttttgctgcatatttgagaagccac
cctgaatcctaaaggtcaccagataattcttgtgtatctgtaagctatac
ttaaaattcagttaccagaaaacaactcttttcacaatatgtcttttgaa
gactttctcatacttggaaaaaaatgtatctttattttatttattttttt
aatgaagtgccaacactcagaactgatgaagatcttttttcttcttttat
tttttattaattatgaggctttatcatagtcgcttccttaagtgaagtaa
acagctctttccaaattaatatattttggatgcagttgttaacatcttta
tactttcgattttattgacctgctcacctgttggtaggatatctgatgta
ccgtatatgggttggcaggtgtttcaggaggatcctggtacctgtgaaac
attgaagaaaaatgtggcctcatgaggattcttctgcctgcctcttttgc
ctcttaccgattaatccgaggcctggattttcatgcttcactttaatcct
agggtactctgtctgtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_108729727_108730204
seq2: B6Ng01-106B18.b_45_522

seq1  GAATTCAGTGTTGCAAGTATTTCTTCCACTGTCTTTTAACTTACTTGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGTTGCAAGTATTTCTTCCACTGTCTTTTAACTTACTTGCAG  50

seq1  TATTTTTGTGGCTATTTTTGAATGTTTGTTTTTAAATACAAGTAGCGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTGTGGCTATTTTTGAATGTTTGTTTTTAAATACAAGTAGCGCTT  100

seq1  GACTCAATTTTGACATGTTAAAAAAACAATACATTTGAAAAACCAATGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAATTTTGACATGTTAAAAAAACAATACATTTGAAAAACCAATGGT  150

seq1  TGTTTTGTCAATTTTCTTTTCCTTTTTCCTTTTTCCTTTTTCCTTTTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTCAATTTTCTTTTCCTTTTTCCTTTTTCCTTTTTCCTTTTTCC  200

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTC  250

seq1  TCTCTCACAGTTTTTAAATGGCTCCCAATTTCAGACTAGACCTGAGGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCACAGTTTTTAAATGGCTCCCAATTTCAGACTAGACCTGAGGCTG  300

seq1  TCTTCATTGGCATTAGATGGCATAGTGTGCCACCTTCAATTATATCCGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATTGGCATTAGATGGCATAGTGTGCCACCTTCAATTATATCCGGG  350

seq1  GTCTGCATTAGAGACTAGGTCTATCAGATCCAATAATGGACTCTGGTTTG  400
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCATTATAGACTAGGTCTATCAGATCCAATAATGGACTCTGGTTTG  400

seq1  GTGCAGAGTCCAGACTTAGTTCTACTACTCCTGGCCAACTAGATATGCCT  450
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GTGCAGAGTCCAGACTTAGTTCTACTACTCCTGGCCAACTATATATGCCT  450

seq1  TCACACATATAAAAGCAGTGGCCTGAGC  478
      ||||||||||||||||| ||||||||||
seq2  TCACACATATAAAAGCAATGGCCTGAGC  478

seq1: chr13_108875688_108876854
seq2: B6Ng01-106B18.g_66_1233 (reverse)

seq1  GCACAGACAGAGTACACTGAGTATAAAGGTG-AGCATGAAAAT-CAAGCC  48
      ||||||||||||||| || || || || ||| ||||||||||| || |||
seq2  GCACAGACAGAGTACCCT-AGGATTAAAGTGAAGCATGAAAATCCAGGCC  49

seq1  TCCGATTAATCGTGTAGAGAGACAAAAGAAGCAGGCAGAAGAATACTTCA  98
      || ||||||||| ||| |||| ||||||| |||||||||||||| | |||
seq2  TCGGATTAATCG-GTA-AGAGGCAAAAGAGGCAGGCAGAAGAAT-CCTCA  96

seq1  TGAGG-CACA-TTTTCTTC-ATGTCTCTACAGGTACCAGGATCCTTCTAG  145
      ||||| |||| |||||||| |||| || ||||||||||||||||| || |
seq2  TGAGGCCACATTTTTCTTCAATGTTTC-ACAGGTACCAGGATCCTCCT-G  144

seq1  AAACA-CTGCCAA-CCATATACGGTACATCAGATATCCTACCAACAGGTG  193
      ||||| ||||||| ||||||||||||||||||||||||||||||||||||
seq2  AAACACCTGCCAACCCATATACGGTACATCAGATATCCTACCAACAGGTG  194

seq1  AGCAGGTCAATAAAATCGAAAGTATAAAGATGTTAACAACTGCATCCAAA  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTCAATAAAATCGAAAGTATAAAGATGTTAACAACTGCATCCAAA  244

seq1  ATATATTAATTTGGAAAGAGCTGTTTACTTCACTTAAGGAAGCGACTATG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTAATTTGGAAAGAGCTGTTTACTTCACTTAAGGAAGCGACTATG  294

seq1  ATAAAGCCTCATAATTAATAAAAAATAAAAGAAGAAAAAAGATCTTCATC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGCCTCATAATTAATAAAAAATAAAAGAAGAAAAAAGATCTTCATC  344

seq1  AGTTCTGAGTGTTGGCACTTCATTAAAAAAATAAATAAAATAAAGATACA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGAGTGTTGGCACTTCATTAAAAAAATAAATAAAATAAAGATACA  394

seq1  TTTTTTTCCAAGTATGAGAAAGTCTTCAAAAGACATATTGTGAAAAGAGT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCCAAGTATGAGAAAGTCTTCAAAAGACATATTGTGAAAAGAGT  444

seq1  TGTTTTCTGGTAACTGAATTTTAAGTATAGCTTACAGATACACAAGAATT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCTGGTAACTGAATTTTAAGTATAGCTTACAGATACACAAGAATT  494

seq1  ATCTGGTGACCTTTAGGATTCAGGGTGGCTTCTCAAATATGCAGCAAAAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGTGACCTTTAGGATTCAGGGTGGCTTCTCAAATATGCAGCAAAAA  544

seq1  CTTAAGCTGAGTCCTAAAACTGCAAGGAACTGAGCGCTGCCAATAATCAC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGCTGAGTCCTAAAACTGCAAGGAACTGAGCGCTGCCAATAATCAC  594

seq1  CCAGGTGGGGAGGCGGAACACTGCCTGGCTGGCACCCTGATCACAGTATC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTGGGGAGGCGGAACACTGCCTGGCTGGCACCCTGATCACAGTATC  644

seq1  TCAGGATCCTCATTAGAGAAGCCGGCTGAGCTGAGCCTGGGGTAAGAAAC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATCCTCATTAGAGAAGCCGGCTGAGCTGAGCCTGGGGTAAGAAAC  694

seq1  ACATGCTGTTTGGAGTAGCTAGAGTTTGGTGTACTTACACAGAGCAATGG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCTGTTTGGAGTAGCTAGAGTTTGGTGTACTTACACAGAGCAATGG  744

seq1  AAACAGCACATCATCAGCTCATTCTTGTACTACTGGGCACAGAAATAGGA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGCACATCATCAGCTCATTCTTGTACTACTGGGCACAGAAATAGGA  794

seq1  CTTTCTGTTTTAAGTCACTATGACGTAAGTAACTGAAGCTTCTACAGAGA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGTTTTAAGTCACTATGACGTAAGTAACTGAAGCTTCTACAGAGA  844

seq1  ATTTGGGACAAGTATTTAGGTGGGTAGACACATGTCTTTATTATGTCTCT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGACAAGTATTTAGGTGGGTAGACACATGTCTTTATTATGTCTCT  894

seq1  GGGCAAATACCTAGCAGAATTTCTAAGCTGTAGGGTAGCTGGACGTTCAT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAATACCTAGCAGAATTTCTAAGCTGTAGGGTAGCTGGACGTTCAT  944

seq1  ATTTATAAAGACAAACTATTTCCCAAAGCCGTTGTACTAGTTTATATCCC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAAAGACAAACTATTTCCCAAAGCCGTTGTACTAGTTTATATCCC  994

seq1  AGCCAGCGATTCACGAAAGGTTGAGAGATTTACAACAGTGAAATATCAGT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGCGATTCACGAAAGGTTGAGAGATTTACAACAGTGAAATATCAGT  1044

seq1  TCCATTTTTTTTGTCCGTTCTTAAATTCTAACGTATCTCAGCAGTAAATT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTTTTTTGTCCGTTCTTAAATTCTAACGTATCTCAGCAGTAAATT  1094

seq1  GTCCTGATAAAAAAGACAGGTTTATATCTTTTAATCTCCCAGCCTTATTC  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGATAAAAAAGACAGGTTTATATCTTTTAATCTCCCAGCCTTATTC  1144

seq1  TTATTCAAAAGGTTTTAGGAATTC  1167
      ||||||||||||||||||||||||
seq2  TTATTCAAAAGGTTTTAGGAATTC  1168