BAC Information

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BAC

Clone NameB6Ng01-108C11
Chromosome13 (Build37)
Map Location 66,234,942 - 66,236,119
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr465-ps1, Olfr466, Nlrp4f, ENSMUSG00000074847, Zfp369, LOC100042347, LOC100042341, LOC665738, EG665742, LOC665750, LOC665753, EG544944, EG665767, LOC665777, EG628648, LOC665809, LOC100042404, LOC628722, LOC665851, Vmn2r-ps99, LOC628794, EG665897, LOC100041855, EG628746, LOC100042434
Downstream geneLOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108C11.bB6Ng01-108C11.g
ACCDH915413DH915414
length1,174942
definitionDH915413|Mus musculus domesticus DNA, BAC clone: B6Ng01-108C11, 5' end.DH915414|Mus musculus domesticus DNA, BAC clone: B6Ng01-108C11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagttcttatcatacatatctttcactttcttagatagaatcac
accaaggtatttcatattatttgtacctattgtaaagggtgttgtttccc
taatttctttctcatccggtttatactttgtgtagagtataaggccttgg
cttcacacaatatactgtgaccaaggtacataagtaaataaacagttttc
tcacatgtttctttggctatggtggtttttacagcaacagaatctaagac
atcacctaaatggtaaattgcctctgttgggattttgaatatcatagatt
cctgatgtaataaagggctctgatttgaaaagagaaagaagaatgcatgt
tagcagagtgagaagcaccgtgacagtaatgcatatgatagcacagaagc
actgcactttgggatagctttccaatgtactagggagatgctaagaatac
cagataccatacaaagaagggaacattctatgaaaaggacatagagattc
aaattgtacctgcaaaataaggctttgtaaatgtatgtgaaaagacagtt
tcattataacgtgactgtgtttcattaagtgagaaaaatcactaatggaa
atatttcccacaagaacttcaccagagtgaggtcagtaaattctatggac
atataaatcactctagatgaagggtctccataaattttatcaaaatatga
gactaaagattatttcagttcaatatcacacacaaacatgcacataaaac
acatacacattgttctttacatcaggtgttgaaggtcagggtcatttttc
tctctttttgtcttattgacggtgtcttttgccttgcagaaactttggag
tttcattaggtcccatttgtcaattctcgatcttacagcacatgccattg
ctgttctgttcagaatttttccctgtgcccatatcttcaaggctttcccc
actttctctctataaagttcagtgtctctgattttttgtgaagttccttg
atccacttagatttgaccttagtacaaggaagataagtatggatcgattc
cgcattcttctacatgatatcaccagttggtgccagcaccaattgtgaaa
tgctgtctttcttcactggatgggtttagctccttgtcgaagaatcaagg
tgaacataggggtgtgggttcatt
gaattcttcattgtcttttattttgtccccattttcattgtagatttcat
taatttggatatcctctatcttttaataagttgttgtctatcttgactaa
taaaaggctcaaaggccatctccatgttttattaattctttgtagtcttc
tctttctattttattgatttcagcccccaatttgataatttccggaatct
actcccttttttcattgctccctcgcttctttctgttctagactttaaag
cgtgctgctaaattgccagtatgagagctctccaattttttcatgaaggc
attctgttctatgaatgtttttcttagcaccactttcattttctttgtgt
tccataagattgtgcatgttgctcaattgttgtccttttcattgaattct
aaaaagtctctactttcttcctttatttctgtcttaacatttctttcatt
cattagtgaggtgtgtagcctccatgagtttgtaagctttgtgttctctt
tgtttttttgatatccagttgttatccatggtggtctgataagatacagt
tgttctttcagttttattgtatgtatagagaattgcaatgtgtctgaata
tgtggtcagtttataagtaagtttcatgaggtgctgagcagaaggtatat
tctcttatattttagttgaaagttctctaaatatcagctggattcatgtt
catgttgtcagttaactggactaattctttgtttagttttggtctgaaga
atttgtcaattggtgggagtggggtattaaaatttctgagtataaatgta
tgacactcattatgtgattttagctttaaaactgtttcttttacaaaggc
tggtgaccatatgtttaaggcatagatgttaaaattaaatgtcatctttg
gtgtttttttttctcccttgaggaatctatagttcttcctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_66234942_66236119
seq2: B6Ng01-108C11.b_45_1218

seq1  GAATTCAAGTTCTTATCATACATATCTTTCACTTTCTTAGATAGAATCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTTCTTATCATACATATCTTTCACTTTCTTAGATAGAATCAC  50

seq1  ACCAAGGTATTTCATATTATTTGTACCTATTGTAAAGGGTGTTGTTTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGGTATTTCATATTATTTGTACCTATTGTAAAGGGTGTTGTTTCCC  100

seq1  TAATTTCTTTCTCATCCGGTTTATACTTTGTGTAGAGTATAAGGCCTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCTTTCTCATCCGGTTTATACTTTGTGTAGAGTATAAGGCCTTGG  150

seq1  CTTCACACAATATACTGTGACCAAGGTACATAAGTAAATAAACAGTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACACAATATACTGTGACCAAGGTACATAAGTAAATAAACAGTTTTC  200

seq1  TCACATGTTTCTTTGGCTATGGTGGTTTTTACAGCAACAGAATCTAAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGTTTCTTTGGCTATGGTGGTTTTTACAGCAACAGAATCTAAGAC  250

seq1  ATCACCTAAATGGTAAATTGCCTCTGTTGGGATTTTGAATATCATAGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCTAAATGGTAAATTGCCTCTGTTGGGATTTTGAATATCATAGATT  300

seq1  CCTGATGTAATAAAGGGCTCTGATTTGAAAAGAGAAAGAAGAATGCATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATGTAATAAAGGGCTCTGATTTGAAAAGAGAAAGAAGAATGCATGT  350

seq1  TAGCAGAGTGAGAAGCACCGTGACAGTAATGCATATGATAGCACAGAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGAGTGAGAAGCACCGTGACAGTAATGCATATGATAGCACAGAAGC  400

seq1  ACTGCACTTTGGGATAGCTTTCCAATGTACTAGGGAGATGCTAAGAATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCACTTTGGGATAGCTTTCCAATGTACTAGGGAGATGCTAAGAATAC  450

seq1  CAGATACCATACAAAGAAGGGAACATTCTATGAAAAGGACATAGAGATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATACCATACAAAGAAGGGAACATTCTATGAAAAGGACATAGAGATTC  500

seq1  AAATTGTACCTGCAAAATAAGGCTTTGTAAATGTATGTGAAAAGACAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTACCTGCAAAATAAGGCTTTGTAAATGTATGTGAAAAGACAGTT  550

seq1  TCATTATAACGTGACTGTGTTTCATTAAGTGAGAAAAATCACTAATGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATAACGTGACTGTGTTTCATTAAGTGAGAAAAATCACTAATGGAA  600

seq1  ATATTTCCCACAAGAACTTCACCAGAGTGAGGTCAGTAAATTCTATGGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCCCACAAGAACTTCACCAGAGTGAGGTCAGTAAATTCTATGGAC  650

seq1  ATATAAATCACTCTAGATGAAGGGTCTCCATAAATTTTATCAAAATATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAATCACTCTAGATGAAGGGTCTCCATAAATTTTATCAAAATATGA  700

seq1  GACTAAAGATTATTTCAGTTCAATATCACACACAAACATGCACATAAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAAGATTATTTCAGTTCAATATCACACACAAACATGCACATAAAAC  750

seq1  ACATACACATTGTTCTTTACATCAGGTGTTGAAGGTCAGGGTCATTTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACACATTGTTCTTTACATCAGGTGTTGAAGGTCAGGGTCATTTTTC  800

seq1  TCTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAG  850

seq1  TTTCATTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACATGCCATTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACATGCCATTG  900

seq1  CTGTTCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTC  950
      |||||||||||| |||||||| ||||||||||||||||||||||| ||||
seq2  CTGTTCTGTTCA-GAATTTTT-CCCTGTGCCCATATCTTCAAGGC-TTTC  947

seq1  CCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGATTTTATGTGAAGTTC  1000
      |||||||||| ||||||||  |||||||||||||||||| ||||||||||
seq2  CCCACTTTCT-CTCTATAAAGTTCAGTGTCTCTGATTTTTTGTGAAGTTC  996

seq1  CTTGATCCACTTAGATTTGACCTTAGTACAAGG-AGATAAGTATGGATCG  1049
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTTGATCCACTTAGATTTGACCTTAGTACAAGGAAGATAAGTATGGATCG  1046

seq1  ATT-CGCATTCTTCTACATGATAACAACCAGTT-GTGCCAGCACCAATTG  1097
      ||| ||||||||||||||||||| | ||||||| ||||||||||||||||
seq2  ATTCCGCATTCTTCTACATGATATC-ACCAGTTGGTGCCAGCACCAATTG  1095

seq1  TTGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAA  1147
      |   |||||||||||||||| |||||||||| ||||||| ||||||||||
seq2  T--GAAATGCTGTCTTTCTT-CACTGGATGGGTTTAGCT-CCTTGTCGAA  1141

seq1  G-ATCAA-GTGACCATAGGTGTGTGGGTTCATT  1178
      | ||||| |||| |||||| |||||||||||||
seq2  GAATCAAGGTGAACATAGGGGTGTGGGTTCATT  1174