BAC Information

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BAC

Clone NameB6Ng01-110H17
Chromosome13 (Build37)
Map Location 69,335,283 - 69,335,886
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666238, EG666245, EG666272, LOC100042223, Mtrr, LOC100042233, Fastkd3, 1700001L19Rik, Adcy2, LOC666205
Downstream geneLOC218332, Pols, A530095I07Rik, Srd5a1, Nsun2, LOC100042260, 3110006E14Rik, 4930547H16Rik, Med10, EG620143, LOC100042291
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-110H17.bB6Ng01-110H17.g
ACCDH917093DH917094
length6041,154
definitionDH917093|Mus musculus domesticus DNA, BAC clone: B6Ng01-110H17, 5' end.DH917094|Mus musculus domesticus DNA, BAC clone: B6Ng01-110H17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctattgactgataagcagagctcagggctagagcctatggagatg
aagggtttgtaatatgcataaggatagattctattgatggagcaaggctg
agtctgttcactgagagacaaagctaggattaggacctaaacaggtctca
ggatttggaggaaattcaggtagaggtcggctcccattagaataacaaag
aatccctgggttgtttgaccactttcaccccagcattccctccacatgac
taagcctcattaagaaaacagacccgtgtgtttaacagcactggtttctc
caatgcttactctaagctgtgctccctgcaataaaactcacagtgcaaat
aattttagtcagtgaaatacagcatctaaatcagttctcacattaggctc
ccagctaagtgatccccacaacatccattcccctgagctgctttaaatag
cacgttgtttgtcagctaatgcatcgtgatgtaattatgcacactttaca
gaacttctgctgctctgtaggatgctctgtaggatttccactgtgcatat
ccttaggttttgtgtgtgtgtgtgtgtgtgtgtgtgttgagagagagaga
gaga
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggagatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaagatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctggccaa
atggatggaactggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtatgaacactatgcccctccttagaagtgggag
caaaacacccttggaaggagttacagagacaaagtttggagttgagataa
aaggatggaccatgtagacactaccatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcagattatgctgaaag
gaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaaaca
tagagtggatgctcacagtcgctattggatggatcacatggccccaatga
gagctagagaagtaccaaagaagctaaaggatctgcacccttatagtgaa
caacattatgactaacagtaccccgactcttgactctagctgcatatgca
tcaaaagatgctagtcgcactactggaagagagccaattggaaccgcaaa
ctttatgcctcagtatcagcacgccagggccataagggagtgggtcggta
agtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_69335283_69335886
seq2: B6Ng01-110H17.b_50_653 (reverse)

seq1  TCTCTCTCTCTCTCTCTC-ACACACACACACACACACACACACAC-AAAC  48
        |||||||||||||||| |||||||||||||||||||||||||| ||||
seq2  --TCTCTCTCTCTCTCTCAACACACACACACACACACACACACACAAAAC  48

seq1  CTAAGGATATGCACAGTGGAAATCCTACAGAGCATCCTACAGAGCAGCAG  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGATATGCACAGTGGAAATCCTACAGAGCATCCTACAGAGCAGCAG  98

seq1  AAGTTCTGTAAAGTGTGCATAATTACATCACGATGCATTAGCTGACAAAC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTGTAAAGTGTGCATAATTACATCACGATGCATTAGCTGACAAAC  148

seq1  AACGTGCTATTTAAAGCAGCTCAGGGGAATGGATGTTGTGGGGATCACTT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTGCTATTTAAAGCAGCTCAGGGGAATGGATGTTGTGGGGATCACTT  198

seq1  AGCTGGGAGCCTAATGTGAGAACTGATTTAGATGCTGTATTTCACTGACT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGGAGCCTAATGTGAGAACTGATTTAGATGCTGTATTTCACTGACT  248

seq1  AAAATTATTTGCACTGTGAGTTTTATTGCAGGGAGCACAGCTTAGAGTAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTATTTGCACTGTGAGTTTTATTGCAGGGAGCACAGCTTAGAGTAA  298

seq1  GCATTGGAGAAACCAGTGCTGTTAAACACACGGGTCTGTTTTCTTAATGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGGAGAAACCAGTGCTGTTAAACACACGGGTCTGTTTTCTTAATGA  348

seq1  GGCTTAGTCATGTGGAGGGAATGCTGGGGTGAAAGTGGTCAAACAACCCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTAGTCATGTGGAGGGAATGCTGGGGTGAAAGTGGTCAAACAACCCA  398

seq1  GGGATTCTTTGTTATTCTAATGGGAGCCGACCTCTACCTGAATTTCCTCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTCTTTGTTATTCTAATGGGAGCCGACCTCTACCTGAATTTCCTCC  448

seq1  AAATCCTGAGACCTGTTTAGGTCCTAATCCTAGCTTTGTCTCTCAGTGAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTGAGACCTGTTTAGGTCCTAATCCTAGCTTTGTCTCTCAGTGAA  498

seq1  CAGACTCAGCCTTGCTCCATCAATAGAATCTATCCTTATGCATATTACAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTCAGCCTTGCTCCATCAATAGAATCTATCCTTATGCATATTACAA  548

seq1  ACCCTTCATCTCCATAGGCTCTAGCCCTGAGCTCTGCTTATCAGTCAATA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTCATCTCCATAGGCTCTAGCCCTGAGCTCTGCTTATCAGTCAATA  598

seq1  GAATTC  604
      ||||||
seq2  GAATTC  604