BAC Information

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BAC

Clone NameB6Ng01-111I21
Chromosome13 (Build37)
Map Location 25,998,938 - 26,131,738
singlet/doubletdoublet
Overlap genenone
Upstream geneAldh5a1, Gpld1, Mrs2l, LOC675430, Dcdc2a, Nrsn1, Tpi-rs8, LOC214973
Downstream geneLOC666221, LOC100042180, LOC100042191, Hdgfl1, LOC100040939, LOC100040945, LOC100040957
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-111I21.bB6Ng01-111I21.g
ACCDH917868DH917869
length1,117207
definitionDH917868|Mus musculus domesticus DNA, BAC clone: B6Ng01-111I21, 5' end.DH917869|Mus musculus domesticus DNA, BAC clone: B6Ng01-111I21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,130,600 - 26,131,738)(25,998,938 - 25,999,144)
sequence
gaattcaatgatctacccgcctgtgcttcccacgtgctgcaattaaaagc
ctgctccatcactgcctgacagaattattaatttctgaaatattcaatgg
ttaatccacgatctcctaagttgatgggctactaagatagaaatatatat
tacaagccatagtgctttcttcctgggaaaaaaatggatatatgttattg
tttccctgaatgttatgatggtcatgatgacaaacagcatgtattcaaaa
tatttaaactacagataggattatttctttaataaagtaataacccctac
tttgatgaaaaagtgcaatggagctgttggttgtagtgtgaatacatgtc
ccttttcattttacaccctcaccttctgatggcatccgagtaaaggcatt
catgtgtaaatacattagcatatccacaatgttctccaaggctgaaaccc
tttcctctgtggaaacagagtttgactgcaataaactgcatttgctttct
aagaatctgctttgctttcagtgacttgtgttattttattctactctgta
tgattatcttcattttcttctcaattctttggatgaaacttgttcactta
ttcgtgtttcaaatatttatagaaggtattttgatcatatccatcaacca
ctacctctgtccaatgctccttcgcggacctaaccccttttctctctcaa
cttcacttcttcattttggttgatgttacgaatcaccccttgatcccaag
tagtgttattcatatggggcatggatgtgggatcttctgttgtggtacta
gcagtctactagtggccatttgtccaaaactaatgactctaactcaaaaa
ccatcaactgacaatagctctcttccatgagtaagtcctcagaggtctct
ccctggtcatgctgaaagtttaccagcttgatctgaaagatgtagcactt
ggtactttccctttaatttacttttctgatcactgatcaataaaaaaaat
gacactctttagaaatactacattaactattcaaagaatgtaggcatacc
taattcgttctctacttcatctaagtacaggtgtgattattgacctttag
tatgaatgcactctatt
tctaaatcaaatcctatatctgttttttgttgttgttgttgttgttgttg
ttgttgttttgttgtttttttgggtttttatttttctgtctagcatttga
gttctacatcaaatagagtttcacaattttgaattgaaatgtcacttggg
aactaatatatgtgtttcttcacctttgatactaaagccctaatgtttac
ttttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_26130600_26131738
seq2: B6Ng01-111I21.b_49_1165 (reverse)

seq1  AATAGAGTGCATATTACATAACTAAAAGGTCAAATAATCACA-CTGTACT  49
      |||||||||||   | ||| ||| ||||||| |||||||||| |||||||
seq2  AATAGAGTGCA---TTCAT-ACT-AAAGGTC-AATAATCACACCTGTACT  44

seq1  TATGAATTGAAAGTAGAAGAAAAGAAAATAAGGTATGCCTACATTTCTTT  99
      || ||  || |||||| ||||     ||| ||||||||||||| ||||||
seq2  TA-GA--TG-AAGTAG-AGAA---CGAATTAGGTATGCCTACA-TTCTTT  85

seq1  GGAATAGTTAATGTAGTATTTCTAAAGAGTGTCATTTTTTTTATTGATTC  149
       |||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  -GAATAGTTAATGTAGTATTTCTAAAGAGTGTCATTTTTTTTATTGA-TC  133

seq1  AGTGATACAGAAAAAGTAAATTAAAGGGAAAGTACCAAGTGCCTACATCT  199
      |||||| ||| |||||||||||||||||||||||||||||| ||||||||
seq2  AGTGAT-CAG-AAAAGTAAATTAAAGGGAAAGTACCAAGTG-CTACATCT  180

seq1  TTTCAAGATCAAGCTGGTAAACTTTCAGCATGGACCAGGGAGAGACCTCT  249
      ||   |||||||||||||||||||||||||| ||||||||||||||||||
seq2  TT--CAGATCAAGCTGGTAAACTTTCAGCAT-GACCAGGGAGAGACCTCT  227

seq1  GAGGACTTACTCATGGAAGAGAGCTATTGTCAGTTGATGGTTTTTGAGTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACTTACTCATGGAAGAGAGCTATTGTCAGTTGATGGTTTTTGAGTT  277

seq1  AGAGTCATTAGTTTTTGGACAAATGGCCACTAGTAGACTGCTAGTACCAC  349
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCATTAG-TTTTGGACAAATGGCCACTAGTAGACTGCTAGTACCAC  326

seq1  AACAGAAGATCCCACATCCATG-CCCATATGAATAACACTACTTGGGATC  398
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AACAGAAGATCCCACATCCATGCCCCATATGAATAACACTACTTGGGATC  376

seq1  AAGGGGTGATTCGTAACATCAACCAAAATGAAGAAGTGAAGTTGAGAGAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGTGATTCGTAACATCAACCAAAATGAAGAAGTGAAGTTGAGAGAG  426

seq1  AAAAGGGGTTAGGTCCGCGAAGGAGCATTGGACAGAGGTAGTGGTTGATG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGGTTAGGTCCGCGAAGGAGCATTGGACAGAGGTAGTGGTTGATG  476

seq1  GATATGATCAAAATACCTTCTATAAATATTTGAAACACGAATAAGTGAAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGATCAAAATACCTTCTATAAATATTTGAAACACGAATAAGTGAAC  526

seq1  AAGTTTCATCCAAAGAATTGAGAAGAAAATGAAGATAATCATACAGAGTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCATCCAAAGAATTGAGAAGAAAATGAAGATAATCATACAGAGTA  576

seq1  GAATAAAATAACACAAGTCACTGAAAGCAAAGCAGATTCTTAGAAAGCAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAAATAACACAAGTCACTGAAAGCAAAGCAGATTCTTAGAAAGCAA  626

seq1  ATGCAGTTTATTGCAGTCAAACTCTGTTTCCACAGAGGAAAGGGTTTCAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGTTTATTGCAGTCAAACTCTGTTTCCACAGAGGAAAGGGTTTCAG  676

seq1  CCTTGGAGAACATTGTGGATATGCTAATGTATTTACACATGAATGCCTTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGAGAACATTGTGGATATGCTAATGTATTTACACATGAATGCCTTT  726

seq1  ACTCGGATGCCATCAGAAGGTGAGGGTGTAAAATGAAAAGGGACATGTAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGGATGCCATCAGAAGGTGAGGGTGTAAAATGAAAAGGGACATGTAT  776

seq1  TCACACTACAACCAACAGCTCCATTGCACTTTTTCATCAAAGTAGGGGTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACTACAACCAACAGCTCCATTGCACTTTTTCATCAAAGTAGGGGTT  826

seq1  ATTACTTTATTAAAGAAATAATCCTATCTGTAGTTTAAATATTTTGAATA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTTATTAAAGAAATAATCCTATCTGTAGTTTAAATATTTTGAATA  876

seq1  CATGCTGTTTGTCATCATGACCATCATAACATTCAGGGAAACAATAACAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTGTTTGTCATCATGACCATCATAACATTCAGGGAAACAATAACAT  926

seq1  ATATCCATTTTTTTCCCAGGAAGAAAGCACTATGGCTTGTAATATATATT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCATTTTTTTCCCAGGAAGAAAGCACTATGGCTTGTAATATATATT  976

seq1  TCTATCTTAGTAGCCCATCAACTTAGGAGATCGTGGATTAACCATTGAAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTTAGTAGCCCATCAACTTAGGAGATCGTGGATTAACCATTGAAT  1026

seq1  ATTTCAGAAATTAATAATTCTGTCAGGCAGTGATGGAGCAGGCTTTTAAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGAAATTAATAATTCTGTCAGGCAGTGATGGAGCAGGCTTTTAAT  1076

seq1  TGCAGCACGTGGGAAGCACAGGCGGGTAGATCATTGAATTC  1139
      |||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCACGTGGGAAGCACAGGCGGGTAGATCATTGAATTC  1117

seq1: chr13_25998938_25999144
seq2: B6Ng01-111I21.g_73_279

seq1  TCTAAATCAAATCCTATATCTGTTTTTTGTTGTTGTTGTTGTTGTTGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATCAAATCCTATATCTGTTTTTTGTTGTTGTTGTTGTTGTTGTTG  50

seq1  TTGTTGTTTTGTTGTTTTTTTGGGTTTTTTTTTTTCTGTCTAGCATTTGA  100
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTGTTGTTTTGTTGTTTTTTTGGGTTTTTATTTTTCTGTCTAGCATTTGA  100

seq1  GTTCTACATCAAATAGAGTTTCACAATTTTGAATTGAAATGTCACTTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTACATCAAATAGAGTTTCACAATTTTGAATTGAAATGTCACTTGGG  150

seq1  AACTAATATATGTGTTTCTTCACCTTTGATACTAAAGCCCTAATGTTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAATATATGTGTTTCTTCACCTTTGATACTAAAGCCCTAATGTTTAC  200

seq1  TTTTTTT  207
      |||||||
seq2  TTTTTTT  207