BAC Information

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BAC

Clone NameB6Ng01-113A02
Chromosome13 (Build37)
Map Location 91,560,711 - 91,720,509
singlet/doubletdoublet
Overlap geneSsbp2, LOC666889
Upstream geneLOC624190, EG435376, Rps23, Atg10, LOC100042959
Downstream geneAcot12, Zcchc9, Ckmt2, Rasgrf2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113A02.bB6Ng01-113A02.g
ACCDH918914DH918915
length8151,132
definitionDH918914|Mus musculus domesticus DNA, BAC clone: B6Ng01-113A02, 5' end.DH918915|Mus musculus domesticus DNA, BAC clone: B6Ng01-113A02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,560,711 - 91,561,524)(91,719,379 - 91,720,509)
sequence
gaattccaatcatctatatggataaagtgccagaaagcaaaatgtacttt
ttttctgtttttacacaactggaaaggtgaaagcaagctgaagcaaacag
cttggaaagccttgggcaggacaaagcagccccaggttagtaagaggaag
aaagggtgacttgggatccagggcttcaccctgggagtgattgtcatcac
aggattcaaatgatcacttctgaaagcttcattccagactgaggtgtcct
aatttcagcttcagagaagtattgacaacaacagaaggaggagaaataaa
gaaggggaaaaacagactaaaaggaaagaaaggactggggttgtttgcat
gtgataaatgatcaatggtcagttacttgaaggcatcaagaacaacattt
caacagtgttttgcagccccagaccccagcagaaactcccttcaggaggc
tctagcagcagcctctgcacctacagcacagaaagctgcttgcagtaact
gtcaccttcaggatgacagccaggcgacagagcatatcacccagagggtc
gtccttgtgataacacgaaaccaagtgaacttggtcatttcttggtgttt
taataacgctgatgcaaaatatgagtaaaattacaggtgccagtccccgc
tgcagcgtgctgataaacagctccccatttcgtagtggctggtcacatct
ggagcctttagggatgcgaaagtactggaaggattattgcaaaaacttaa
agacacttttgctgccaatactttgttttttaacctaaattagtggggtt
tggggaggagggagg
gaattcagaacttctttgagtcacaaacaccatggagatgctcacccact
cagaggctagtctctaccacttcacaaagtactcaagaaaaaattggaca
gaacaagagaatgggaagagactcccttggacaacaggtctcgacagcag
gaagaacaactctctccaggtaccattttcactaagatgcacaaggttta
agctgctgaaagaacagcagtatatagaatgctctcagaaaacaagttga
catccatgcagcaggaaaggttaaataaataaaatctgtcccacccgaga
aacttagggaatgtcatgatccaagacctcacctaccactgaataagatg
tgcttacctgagacagggaaacaggctgtgcccaagactgaggcggaacc
agaacagaatcagccaactctacccctcctcaccaccaagccagcaagaa
tcaaataaacagaaatgttatagccataaagcataactcagaccaggaga
ctaatctgccatcatgcacattaaaggtggcacaagtccatttttccaag
cataattttacaaatgttttactttcaaccaaaagagcatgaaagaacac
agatgtctaagaaatgaagccagagactgacaaagttattggaactaaag
ggcctgaaatttaaggtatctttaacaaacaggttaaaggctcgagtaca
gccagagaacagaaactagcaaacaagacaccaaaagaggtgttagtaga
aaatggttaaacacagatgtaacaatcaaatagagaaggatgcaatgaaa
ggaattgaaacagaaactatggcaacagagatgggggactatgtttgacc
acatcatcagcaaactcacattatagagaatcattaagggaaaagctcaa
ccatactgtacagaactaatgctctgaagagtcatatgttggtgagtgct
tctgggccttagcttatctgaatagactgacaggatagattctggaaagc
ggggagtcattgtcttccactgtgcccacactgaggaccggctctagagg
tgacttccaagtcacagtcaccaggcatcctgtgattaatctcactgggg
cctcagaacaaatcattaggttgaaaagaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_91560711_91561524
seq2: B6Ng01-113A02.b_49_863

seq1  GAATTCCAATCATCTATATGGATAAAGTGCCAGAAAGCAAAATGTACTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATCATCTATATGGATAAAGTGCCAGAAAGCAAAATGTACTTT  50

seq1  TTTTCTGTTTTTACACAACTGGAAAGGTGAAAGCAAGCTGAAGCAAACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGTTTTTACACAACTGGAAAGGTGAAAGCAAGCTGAAGCAAACAG  100

seq1  CTTGGAAAGCCTTGGGCAGGACAAAGCAGCCCCAGGTTAGTAAGAGGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAAAGCCTTGGGCAGGACAAAGCAGCCCCAGGTTAGTAAGAGGAAG  150

seq1  AAAGGGTGACTTGGGATCCAGGGCTTCACCCTGGGAGTGATTGTCATCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGTGACTTGGGATCCAGGGCTTCACCCTGGGAGTGATTGTCATCAC  200

seq1  AGGATTCAAATGATCACTTCTGAAAGCTTCATTCCAGACTGAGGTGTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTCAAATGATCACTTCTGAAAGCTTCATTCCAGACTGAGGTGTCCT  250

seq1  AATTTCAGCTTCAGAGAAGTATTGACAACAACAGAAGGAGGAGAAATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCAGCTTCAGAGAAGTATTGACAACAACAGAAGGAGGAGAAATAAA  300

seq1  GAAGGGGAAAAACAGACTAAAAGGAAAGAAAGGACTGGGGTTGTTTGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGGAAAAACAGACTAAAAGGAAAGAAAGGACTGGGGTTGTTTGCAT  350

seq1  GTGATAAATGATCAATGGTCAGTTACTTGAAGGCATCAAGAACAACATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAAATGATCAATGGTCAGTTACTTGAAGGCATCAAGAACAACATTT  400

seq1  CAACAGTGTTTTGCAGCCCCAGACCCCAGCAGAAACTCCCTTCAGGAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGTGTTTTGCAGCCCCAGACCCCAGCAGAAACTCCCTTCAGGAGGC  450

seq1  TCTAGCAGCAGCCTCTGCACCTACAGCACAGAAAGCTGCTTGCAGTAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCAGCAGCCTCTGCACCTACAGCACAGAAAGCTGCTTGCAGTAACT  500

seq1  GTCACCTTCAGGATGACAGCCAGGCGACAGAGCATATCACCCAGAGGGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCTTCAGGATGACAGCCAGGCGACAGAGCATATCACCCAGAGGGTC  550

seq1  GTCCTTGTGATAACACGAAACCAAGTGAACTTGGTCATTTCTTGGTGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTGTGATAACACGAAACCAAGTGAACTTGGTCATTTCTTGGTGTTT  600

seq1  TAATAACGCTGATGCAAAATATGAGTAAAATTACAGGTGCCAGTCCCCGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAACGCTGATGCAAAATATGAGTAAAATTACAGGTGCCAGTCCCCGC  650

seq1  TGCAGCGTGCTGATAAACAGCTCCCCATTTCGTAGTGGCTGGTCACATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCGTGCTGATAAACAGCTCCCCATTTCGTAGTGGCTGGTCACATCT  700

seq1  GGAGCCTTTAGGGATGCGAAAGTACTGGAAGGATTATTGCAAAAACTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCTTTAGGGATGCGAAAGTACTGGAAGGATTATTGCAAAAACTTAA  750

seq1  AGACACTTTTGCTGCCAATACTTTG-TTTTTAACCTAAATTAGTGGGGTT  799
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGACACTTTTGCTGCCAATACTTTGTTTTTTAACCTAAATTAGTGGGGTT  800

seq1  TGGGGAGGAGGGAGG  814
      |||||||||||||||
seq2  TGGGGAGGAGGGAGG  815

seq1: chr13_91719379_91720509
seq2: B6Ng01-113A02.g_70_1201 (reverse)

seq1  CCCTCTTTTCACACTAATGATTTGTTCTGAGG-CCCAGTGAG-TTTATCC  48
      |||||||||||  ||||||||||||||||||| ||||||||| || ||| 
seq2  CCCTCTTTTCAACCTAATGATTTGTTCTGAGGCCCCAGTGAGATTAATCA  50

seq1  AGGGATGCCTGTGTGACTGTGACTTGG-AGTCACCTTCTAGAGCCTGGTC  97
        ||||||||| ||||||||||||||| ||||||| ||||||||| ||||
seq2  CAGGATGCCTG-GTGACTGTGACTTGGAAGTCACC-TCTAGAGCC-GGTC  97

seq1  CTCAGTGTGTGCACAGTGGAAGACAATGACT-CCCGCTTTCCAGAATCTA  146
      ||||||||| ||||||||||||||||||||| ||||||||||||||||||
seq2  CTCAGTGTGGGCACAGTGGAAGACAATGACTCCCCGCTTTCCAGAATCTA  147

seq1  TCCTGTCAGTCTA-TCAGATAAGCTAAGGCCCATGAGGCACTCACCCACA  195
      ||||||||||||| ||||||||||||||||||| || ||||||||| |||
seq2  TCCTGTCAGTCTATTCAGATAAGCTAAGGCCCA-GAAGCACTCACCAACA  196

seq1  TATGACTCTTCAGAGCATTGGTCTTGTACAGTATGGTTTGAGCTTTTCCT  245
      ||||||||||||||||||| ||  |||||||||||| |||||||||||| 
seq2  TATGACTCTTCAGAGCATTAGTTCTGTACAGTATGG-TTGAGCTTTTCCC  245

seq1  TTATTGATTCTCTATAATGTTGAGTTTGCTGATGATGTGGTCAAACATAG  295
      ||| ||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTAATGATTCTCTATAATG-TGAGTTTGCTGATGATGTGGTCAAACATAG  294

seq1  T-CCCCATCTCTGTTGCCATAGTTTCTGTTTCAATTCCTTTCATTGCATC  344
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCATCTCTGTTGCCATAGTTTCTGTTTCAATTCCTTTCATTGCATC  344

seq1  CTTCTCTATTTGATTGTTACATCTGTGTTTAACCATTTTCTACTAACACC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTATTTGATTGTTACATCTGTGTTTAACCATTTTCTACTAACACC  394

seq1  TC-TTTGGTGTCTTGTTTGCTAGTTTCTGTTCTCTGGCTGTACTCGAGCC  443
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGGTGTCTTGTTTGCTAGTTTCTGTTCTCTGGCTGTACTCGAGCC  444

seq1  TTTAACCTGTTTGTTAAAGATACCTTAAATTTCAGGCCCTTTAGTTCCAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACCTGTTTGTTAAAGATACCTTAAATTTCAGGCCCTTTAGTTCCAA  494

seq1  TAACTTTGTCAGTCTCTGGCTTCATTTCTTAGACATCTGTGTTCTTTCAT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTGTCAGTCTCTGGCTTCATTTCTTAGACATCTGTGTTCTTTCAT  544

seq1  GCTCTTTTGGTTGAAAGTAAAACATTTGTAAAATTATGCTTGGAAAAATG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTTTGGTTGAAAGTAAAACATTTGTAAAATTATGCTTGGAAAAATG  594

seq1  GACTTGTGCCACCTTTAATGTGCATGATGGCAGATTAGTCTCCTGGTCTG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGTGCCACCTTTAATGTGCATGATGGCAGATTAGTCTCCTGGTCTG  644

seq1  AGTTATGCTTTATGGCTATAACATTTCTGTTTATTTGATTCTTGCTGGCT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATGCTTTATGGCTATAACATTTCTGTTTATTTGATTCTTGCTGGCT  694

seq1  TGGTGGTGAGGAGGGGTAGAGTTGGCTGATTCTGTTCTGGTTCCGCCTCA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGTGAGGAGGGGTAGAGTTGGCTGATTCTGTTCTGGTTCCGCCTCA  744

seq1  GTCTTGGGCACAGCCTGTTTCCCTGTCTCAGGTAAGCACATCTTATTCAG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGGGCACAGCCTGTTTCCCTGTCTCAGGTAAGCACATCTTATTCAG  794

seq1  TGGTAGGTGAGGTCTTGGATCATGACATTCCCTAAGTTTCTCGGGTGGGA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGGTGAGGTCTTGGATCATGACATTCCCTAAGTTTCTCGGGTGGGA  844

seq1  CAGATTTTATTTATTTAACCTTTCCTGCTGCATGGATGTCAACTTGTTTT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTTATTTATTTAACCTTTCCTGCTGCATGGATGTCAACTTGTTTT  894

seq1  CTGAGAGCATTCTATATACTGCTGTTCTTTCAGCAGCTTAAACCTTGTGC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGCATTCTATATACTGCTGTTCTTTCAGCAGCTTAAACCTTGTGC  944

seq1  ATCTTAGTGAAAATGGTACCTGGAGAGAGTTGTTCTTCCTGCTGTCGAGA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAGTGAAAATGGTACCTGGAGAGAGTTGTTCTTCCTGCTGTCGAGA  994

seq1  CCTGTTGTCCAAGGGAGTCTCTTCCCATTCTCTTGTTCTGTCCAATTTTT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTGTCCAAGGGAGTCTCTTCCCATTCTCTTGTTCTGTCCAATTTTT  1044

seq1  TCTTGAGTACTTTGTGAAGTGGTAGAGACTAGCCTCTGAGTGGGTGAGCA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAGTACTTTGTGAAGTGGTAGAGACTAGCCTCTGAGTGGGTGAGCA  1094

seq1  TCTCCATGGTGTTTGTGACTCAAAGAAGTTCTGAATTC  1131
      ||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATGGTGTTTGTGACTCAAAGAAGTTCTGAATTC  1132