BAC Information

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BAC

Clone NameB6Ng01-113F14
Chromosome13 (Build37)
Map Location 12,793,360 - 12,882,798
singlet/doubletdoublet
Overlap geneLOC100039744, EG630757
Upstream geneRyr2, LOC100039678, Mtr, LOC100039826, Actn2, EG432725, Heatr1, LOC546246, Lgals8, LOC100039900, Edaradd, Ero1lb, LOC664862, EG238507
Downstream genePrl2c3, LOC100039999, LOC100039754, Prl2c2, LOC434483, LOC674723, Prl2c5, LOC630611, LOC100039786, LOC385049, LOC630663, LOC100040108, Gpr137b, LOC664960, Nid1, Lyst, LOC100039831, Gng4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113F14.bB6Ng01-113F14.g
ACCDH919168DH919169
length1,095690
definitionDH919168|Mus musculus domesticus DNA, BAC clone: B6Ng01-113F14, 5' end.DH919169|Mus musculus domesticus DNA, BAC clone: B6Ng01-113F14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,793,360 - 12,794,453)(12,882,107 - 12,882,798)
sequence
gaattcaactttaacttcatttcttctcggtttcattctttctttcatga
caatgtctattaatttcttctctgtctcaacttcttcccttctcacgggt
cacccccagtccccaacaggcttggtccagtggtttctctctatattttc
acttaaggtgccaaactaatgatcaacagctgactggaaatattacattg
cttaaaagttatctttattctgccgggcgtggtggcgcacacctttaatc
ccagcactcgggaggcagaggcagtcggatttctgattcgaggccaacct
gatctatagagtgagttccaagacagccagggctatacagagaaaccttg
tcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaggactgtccaggat
tctctgagtttttaggggagctcaaattcttggatttgttattcagcttt
gcttggaccatcgctcccaacttctctgcacggagttgataatcgggtcc
ctggaacccgccctgctcccaccttccacctcccaggacctcctttctct
agcctctgatgaaactgcattacttccagaaaacccgctttgattcccag
cacgccacacagaagtttgctctggccaattcctccattcccaaactgtt
tttattgcttggactccaagcaaatctgactttgaattgtgtcccacact
tgagactttgtctggcaggtgtgggctcctgtttcctggggaaatcctat
aacttaaggaacccagaatcaggaactggaaaaatgctcacttagtgatt
ggatgagtaaaggcacacacatttgtcaggctttttgcgcatttcgagca
tccgctcagtctcctttctagggtgggttctgtcccgtccctggccccaa
gtgtttgtttcctggttgcccgctctccaggaacttgcctaactgcagaa
tgctgttgcaaagttcctttcttctggataggagcccaccgtcgggttgg
attcggaatgctgggaacaaacgccccactgcctgcgcggaggaactcgg
gtcgcccctcttcttcctgctcgcttgccatagatagacgggaca
gaattccaggacagccagggctatacagagaaacactgtctcaaaaacaa
aaacaaaacaaaacaaaacaaacaaacaaacaaaaaaaagaactggtgtt
ttcaggaaatttcctggtgataaaagttgaagtatttgtgataattaatg
aaagacaaagaaagacagacactactgatcacacaatttgcagagtactg
aaagtcaatatgattatgattgttatgcacaatccccatatatttgaaat
tttttaaaatgtttaaaacccctcagaacacaataattgaatgggtctta
atttctttaaaaatttcttcaaacatagtcatctaaattcttatcttcat
tgtaccatctttgacatataccacatgttctttaccttgtgtataccaag
acttctttggactttcctcaatttcttctcatattcacattatttagtgt
taatattcccttctcatcctcatattgggtgaaagcacatggtatataat
gaaatataaagagtctcttccatttgtctaagaatttcataaattcgttg
tttttaatagatgcgtagtacaccattgtgtaattttctgtatccattcc
tctgttgagggacatctgggttctttccagtttctggctatacaaataat
gcttctatgaaatggtgaagcatgtgttcttattacaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_12793360_12794453
seq2: B6Ng01-113F14.b_49_1143

seq1  GAATTCAACTTTAACTTCATTTCTTCTCGGTTTCATTCTTTCTTTCATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTTTAACTTCATTTCTTCTCGGTTTCATTCTTTCTTTCATGA  50

seq1  CAATGTCTATTAATTTCTTCTCTGTCTCAACTTCTTCCCTTCTCACGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTCTATTAATTTCTTCTCTGTCTCAACTTCTTCCCTTCTCACGGGT  100

seq1  CACCCCCAGTCCCCAACAGGCTTGGTCCAGTGGTTTCTCTCTATATTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCCAGTCCCCAACAGGCTTGGTCCAGTGGTTTCTCTCTATATTTTC  150

seq1  ACTTAAGGTGCCAAACTAATGATCAACAGCTGACTGGAAATATTACATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAGGTGCCAAACTAATGATCAACAGCTGACTGGAAATATTACATTG  200

seq1  CTTAAAAGTTATCTTTATTCTGCCGGGCGTGGTGGCGCACACCTTTAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAAGTTATCTTTATTCTGCCGGGCGTGGTGGCGCACACCTTTAATC  250

seq1  CCAGCACTCGGGAGGCAGAGGCAGTCGGATTTCTGATTCGAGGCCAACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCACTCGGGAGGCAGAGGCAGTCGGATTTCTGATTCGAGGCCAACCT  300

seq1  GATCTATAGAGTGAGTTCCAAGACAGCCAGGGCTATACAGAGAAACCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTATAGAGTGAGTTCCAAGACAGCCAGGGCTATACAGAGAAACCTTG  350

seq1  TCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGACTGTCCAGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGACTGTCCAGGAT  400

seq1  TCTCTGAGTTTTTAGGGGAGCTCAGATTCTTGGATTTGTTATTCAGCTTT  450
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCTCTGAGTTTTTAGGGGAGCTCAAATTCTTGGATTTGTTATTCAGCTTT  450

seq1  GCTTGGACCATCGCTCCCAACTTCTCTGCACGGAGTTGATAATCGGGTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGACCATCGCTCCCAACTTCTCTGCACGGAGTTGATAATCGGGTCC  500

seq1  CTGGAACCCGCCCTGCTCCCACCTTCCACCTCCCAGGACCTCCTTTCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAACCCGCCCTGCTCCCACCTTCCACCTCCCAGGACCTCCTTTCTCT  550

seq1  AGCCTCTGATGAAACTGCATTACTTCCAGAAAACCCGCTTTGATTCCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCTGATGAAACTGCATTACTTCCAGAAAACCCGCTTTGATTCCCAG  600

seq1  CACGCCACACAGAAGTTTGCTCTGGCCAATTCCTCCATTCCCAAACTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCCACACAGAAGTTTGCTCTGGCCAATTCCTCCATTCCCAAACTGTT  650

seq1  TTTATTGCTTGGACTCCAAGCAAATCTGACTTTGAATTGTGTCCCACACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGCTTGGACTCCAAGCAAATCTGACTTTGAATTGTGTCCCACACT  700

seq1  TGAGACTTTGTCTGGCAGGTGTGGGCTCCTGTTTCCTGCGG-AATCCTAT  749
      |||||||||||||||||||||||||||||||||||||| || ||||||||
seq2  TGAGACTTTGTCTGGCAGGTGTGGGCTCCTGTTTCCTGGGGAAATCCTAT  750

seq1  AACTTAAGGAACCCAGAATCAGGAACTGGAAAAATGCTCACTTAGTGATT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTAAGGAACCCAGAATCAGGAACTGGAAAAATGCTCACTTAGTGATT  800

seq1  GGATGAGTAAAGGCACACACATTTGTCAGGCTTTTTGCGCATTTCGAGCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAGTAAAGGCACACACATTTGTCAGGCTTTTTGCGCATTTCGAGCA  850

seq1  TCCGCTCAGTCTCCTTTCTAGGGTGGGTTCTGTCCCGTCCCTGGCCCCAA  899
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCCGCTCAGTCTCCTTTCTAGGGTGGGTTCTGTCCCGTCCCTGGCCCC-A  899

seq1  AGTGTTTGTTTCCTGGTTGCCCGCTCTCCAGGAACTTGCCTAACTGCAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTGTTTCCTGGTTGCCCGCTCTCCAGGAACTTGCCTAACTGCAGA  949

seq1  ATGCTGTTGCAAAGTTCCTTCTTTCTGGATAGGAGCCCACCGTCGGGTTG  999
      ||||||||||||||||||||  ||||||||||||||||||||||||||||
seq2  ATGCTGTTGCAAAGTTCCTTTCTTCTGGATAGGAGCCCACCGTCGGGTTG  999

seq1  GATCCGGAATGCTGGGAACCAACG-CCCACTG-CTGCGCGGGGGAACCTC  1047
      ||| ||||||||||||||| |||| ||||||| |||||||| |||| |||
seq2  GATTCGGAATGCTGGGAACAAACGCCCCACTGCCTGCGCGGAGGAA-CTC  1048

seq1  GGTGTCGCCCCTCTTCCTCCTGCTCGC-TGCCATTGGTAGACGGGACA  1094
      || ||||||||||||| |||||||||| |||||| | |||||||||||
seq2  GG-GTCGCCCCTCTTCTTCCTGCTCGCTTGCCATAGATAGACGGGACA  1095

seq1: chr13_12882107_12882798
seq2: B6Ng01-113F14.g_70_759 (reverse)

seq1  ACTTGTAATAAGAACACATGCTTCACCATGTTCATAGAAGCCTTATTTGT  50
      ||||||||||||||||||||||||||||| ||||||||||| ||||||||
seq2  ACTTGTAATAAGAACACATGCTTCACCAT-TTCATAGAAGCATTATTTGT  49

seq1  AATAGCCAGAAACTGGAAAGAACCCAGATGTCCCTCAACAGAGGAATGGA  100
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -ATAGCCAGAAACTGGAAAGAACCCAGATGTCCCTCAACAGAGGAATGGA  98

seq1  TACAGAAAATTACACAATGGTGTACTACGCATCTATTAAAAACAACGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAAAATTACACAATGGTGTACTACGCATCTATTAAAAACAACGAAT  148

seq1  TTATGAAATTCTTAGACAAATGGAAGAGACTCTTTATATTTCATTATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAAATTCTTAGACAAATGGAAGAGACTCTTTATATTTCATTATATA  198

seq1  CCATGTGCTTTCACCCAATATGAGGATGAGAAGGGAATATTAACACTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGCTTTCACCCAATATGAGGATGAGAAGGGAATATTAACACTAAA  248

seq1  TAATGTGAATATGAGAAGAAATTGAGGAAAGTCCAAAGAAGTCTTGGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTGAATATGAGAAGAAATTGAGGAAAGTCCAAAGAAGTCTTGGTAT  298

seq1  ACACAAGGTAAAGAACATGTGGTATATGTCAAAGATGGTACAATGAAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAGGTAAAGAACATGTGGTATATGTCAAAGATGGTACAATGAAGAT  348

seq1  AAGAATTTAGATGACTATGTTTGAAGAAATTTTTAAAGAAATTAAGACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTTAGATGACTATGTTTGAAGAAATTTTTAAAGAAATTAAGACCC  398

seq1  ATTCAATTATTGTGTTCTGAGGGGTTTTAAACATTTTAAAAAATTTCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAATTATTGTGTTCTGAGGGGTTTTAAACATTTTAAAAAATTTCAAA  448

seq1  TATATGGGGATTGTGCATAACAATCATAATCATATTGACTTTCAGTACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGGGGATTGTGCATAACAATCATAATCATATTGACTTTCAGTACTC  498

seq1  TGCAAATTGTGTGATCAGTAGTGTCTGTCTTTCTTTGTCTTTCATTAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATTGTGTGATCAGTAGTGTCTGTCTTTCTTTGTCTTTCATTAATT  548

seq1  ATCACAAATACTTCAACTTTTATCACCAGGAAATTTCCTGAAAACACCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAAATACTTCAACTTTTATCACCAGGAAATTTCCTGAAAACACCAG  598

seq1  TTCTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTGTTTTTGTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTGTTTTTGTTTTT  648

seq1  GAGACAGTGTTTCTCTGTATAGCCCTGGCTGTCCTGGAATTC  692
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGTGTTTCTCTGTATAGCCCTGGCTGTCCTGGAATTC  690