BAC Information

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BAC

Clone NameB6Ng01-113G03
Chromosome13 (Build37)
Map Location 52,011,481 - 52,163,705
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC676997, EG667717, Spin1, 4930519N16Rik, EG667728, LOC667733, Ppia-ps13_636.1, LOC625524, Edg3, Shc3, Cks2, Secisbp2, Sema4d, Gadd45g
Downstream geneLOC100040321, Diras2, LOC100040572, Syk, Auh, Nfil3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113G03.bB6Ng01-113G03.g
ACCDH919193DH919194
length3241,073
definitionDH919193|Mus musculus domesticus DNA, BAC clone: B6Ng01-113G03, 5' end.DH919194|Mus musculus domesticus DNA, BAC clone: B6Ng01-113G03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(52,163,382 - 52,163,705)(52,011,481 - 52,012,555)
sequence
gaattctagggaaaataaaacagacccaagtaagtgttcacacttgccaa
ggcaaacatttgattctctggaaatgcaatgcctcgggtcagcacccaga
cagagctggaatttactctcaggggcccgcgtactcacttcactcagggc
agagtctcttcttgttcaccatagccatgccctcattcctgaagcttcca
cgagatggaggattacttggtcctcaaggaagcctagtggcactggcttt
aaagatgaggatactaaggtccagagctgtgcaggcacggctgggtgtgg
aaggggacagggtgggggtggtgg
gaattccctggcttctgggccttcagtcattgctggagaactgcacagag
aagtcgggaacaaagtgtcaggggtccatgaaggagacttgcacactgga
tctccttgctgggtcactctctggcttgctcatagactcgcacttagcta
gatttcttacacagctcaggatcacttgcctaggaatggtactgctcatg
gtggactgatcctcctacagcaattagcaattaaggcaatcccttacaga
cacaccctcaggccaagctgatctaggcaattcctcaactgaggctctcc
tgtgactctaggttttgtagagttgataattcacgctaactaggagagca
atctgagggacctgtacccattctgcagcactgatggttgcacaattggc
taaattaagtctgaatgttcacagaagggtcttctttaagtactgatttt
caagcacagagaaggtgggaggctgtgaggcaatcatgcacaggagggga
agggagggacaacctctaagtgggttggggtccgctcccccacccccacc
cccagacacaggtgtggctgatggggatcctgcagacttgttcactcgcc
aactgaagcactcccgtttggaaaagtagcagattctgctgggaccatct
ggtggcaggaggctccaaaaccacaatggagattgccaggcaggaggaga
gcaagataggacttgtctagcctcttgctttggctgctttgtcacccaca
agccagcgctgccttttcccattgcgggagggagtggtgagctttcgtgg
agcgtgacctgtaggaggaacagccttggccacctctccataaacgccgc
tgctgggggccacgcagcagcaaaggcatctcctgcagtggacctaattg
aagactgccgagaggccattgattgcgacccagacaatgccagcaatcag
aactgctgtttagaagcgatgccttcttaggaccaatggggtgtgaggtt
cgaggagcttgcttgcttgcgttttctaccttgttccgaagtctttggtt
ggtatcctcgtgccaccttacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_52163382_52163705
seq2: B6Ng01-113G03.b_44_367 (reverse)

seq1  CCACCACCCCCACCCTGTCCCCTTCCACACCCAGCCGTGCCTGCACAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACCCCCACCCTGTCCCCTTCCACACCCAGCCGTGCCTGCACAGCT  50

seq1  CTGGACCTTAGTATCCTCATCTTTAAAGCCAGTGCCACTAGGCTTCCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACCTTAGTATCCTCATCTTTAAAGCCAGTGCCACTAGGCTTCCTTG  100

seq1  AGGACCAAGTAATCCTCCATCTCGTGGAAGCTTCAGGAATGAGGGCATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCAAGTAATCCTCCATCTCGTGGAAGCTTCAGGAATGAGGGCATGG  150

seq1  CTATGGTGAACAAGAAGAGACTCTGCCCTGAGTGAAGTGAGTACGCGGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGTGAACAAGAAGAGACTCTGCCCTGAGTGAAGTGAGTACGCGGGC  200

seq1  CCCTGAGAGTAAATTCCAGCTCTGTCTGGGTGCTGACCCGAGGCATTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGAGTAAATTCCAGCTCTGTCTGGGTGCTGACCCGAGGCATTGCA  250

seq1  TTTCCAGAGAATCAAATGTTTGCCTTGGCAAGTGTGAACACTTACTTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGAGAATCAAATGTTTGCCTTGGCAAGTGTGAACACTTACTTGGG  300

seq1  TCTGTTTTATTTTCCCTAGAATTC  324
      ||||||||||||||||||||||||
seq2  TCTGTTTTATTTTCCCTAGAATTC  324

seq1: chr13_52011481_52012555
seq2: B6Ng01-113G03.g_69_1141

seq1  GAATTCCCTGGCTTCTGGGCCTTCAGTCATTGCTGGAGAACTGCACAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGGCTTCTGGGCCTTCAGTCATTGCTGGAGAACTGCACAGAG  50

seq1  AAGTCGGGAACAAAGTGTCAGGGGTCCATGAAGGAGACTTGCACACTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCGGGAACAAAGTGTCAGGGGTCCATGAAGGAGACTTGCACACTGGA  100

seq1  TCTCCTTGCTGGGTCACTCTCTGGCTTGCTCATAGACTCGCACTTAGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTGCTGGGTCACTCTCTGGCTTGCTCATAGACTCGCACTTAGCTA  150

seq1  GATTTCTTACACAGCTCAGGATCACTTGCCTAGGAATGGTACTGCTCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTTACACAGCTCAGGATCACTTGCCTAGGAATGGTACTGCTCATG  200

seq1  GTGGACTGATCCTCCTACAGCAATTAGCAATTAAGGCAATCCCTTACAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACTGATCCTCCTACAGCAATTAGCAATTAAGGCAATCCCTTACAGA  250

seq1  CACACCCTCAGGCCAAGCTGATCTAGGCAATTCCTCAACTGAGGCTCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCCTCAGGCCAAGCTGATCTAGGCAATTCCTCAACTGAGGCTCTCC  300

seq1  TGTGACTCTAGGTTTTGTAGAGTTGATAATTCACGCTAACTAGGAGAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACTCTAGGTTTTGTAGAGTTGATAATTCACGCTAACTAGGAGAGCA  350

seq1  ATCTGAGGGACCTGTACCCATTCTGCAGCACTGATGGTTGCACAATTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGGGACCTGTACCCATTCTGCAGCACTGATGGTTGCACAATTGGC  400

seq1  TAAATTAAGTCTGAATGTTCACAGAAGGGTCTTCTTTAAGTACTGATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAAGTCTGAATGTTCACAGAAGGGTCTTCTTTAAGTACTGATTTT  450

seq1  CAAGCACAGAGAAGGTGGGAGGCTGTGAGGCAATCATGCACAGGAGGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCACAGAGAAGGTGGGAGGCTGTGAGGCAATCATGCACAGGAGGGGA  500

seq1  AGGGAGGGACAACCTCTAAGTGGGTTGGGGTCCGCTCCCCCACCCCCACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGGACAACCTCTAAGTGGGTTGGGGTCCGCTCCCCCACCCCCACC  550

seq1  CCCAGACACAGGTGTGGCTGATGGGGATCCTGCAGACTTGTTCACTCGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGACACAGGTGTGGCTGATGGGGATCCTGCAGACTTGTTCACTCGCC  600

seq1  AACTGAAGCACTCCCGTTTGGAAAAGTAGCAGATTCTGCTGGGACCATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAGCACTCCCGTTTGGAAAAGTAGCAGATTCTGCTGGGACCATCT  650

seq1  GGTGGCAGGAGGCTCCAAAACCACAATGGAGATTGCCAGGCAGGAGGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCAGGAGGCTCCAAAACCACAATGGAGATTGCCAGGCAGGAGGAGA  700

seq1  GCAAGATAGGACTTGTCTAGCCTCTTGCTTTGGCTGCTTTGTCACCCACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGATAGGACTTGTCTAGCCTCTTGCTTTGGCTGCTTTGTCACCCACA  750

seq1  AGCCAGCGCTGCCTTTTCCCATTGCGGGAGGGAGTGGTGAGCTTTCGTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGCGCTGCCTTTTCCCATTGCGGGAGGGAGTGGTGAGCTTTCGTGG  800

seq1  AGCGTGACCTGTAGGAGGAACAGCCTTGGCCACCTCTCCATAAACGCCGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTGACCTGTAGGAGGAACAGCCTTGGCCACCTCTCCATAAACGCCGC  850

seq1  TGCTGGGGGCCACGCAGCAGCAAAGGCATCTCCTGCAGTGGACCTAATTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGGGCCACGCAGCAGCAAAGGCATCTCCTGCAGTGGACCTAATTG  900

seq1  AAGACTGCCAGAGAGGCCATTGATTGCGGACCCAGACAATGCCAGCCAAT  950
      ||||||||| ||||||||||||||||| ||||||||||||||||| ||||
seq2  AAGACTGCC-GAGAGGCCATTGATTGC-GACCCAGACAATGCCAG-CAAT  947

seq1  CAGGAACTGCTGTTTAGAAGCGATGCCTTCTTAGGACCAATGGGGTG-GA  999
      || |||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CA-GAACTGCTGTTTAGAAGCGATGCCTTCTTAGGACCAATGGGGTGTGA  996

seq1  GGTTCAGAGGAGCTTGC-TGCTGGCGTTTCTCACCTGCTTCCAGAGTCTG  1048
      ||||| ||||||||||| |||| ||||||   ||||  ||||  ||||| 
seq2  GGTTC-GAGGAGCTTGCTTGCTTGCGTTTTCTACCTTGTTCCGAAGTCTT  1045

seq1  TGTTGTTG--ATTC-CATGCCACCTTACCT  1075
      ||  ||||  || | | |||||||||||||
seq2  TG--GTTGGTATCCTCGTGCCACCTTACCT  1073