BAC Information

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BAC

Clone NameB6Ng01-114E14
Chromosome13 (Build37)
Map Location 81,238,129 - 81,238,688
singlet/doubletsinglet
Overlap geneGpr98
Upstream geneLOC382780, EG666933, Arrdc3, LOC666964, LOC100043074, LOC218368, LOC666979, EG666984
Downstream geneLysmd3, Polr3g, 2900024O10Rik, Cetn3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114E14.g
ACCDH919844
length554
definitionDH919844|Mus musculus domesticus DNA, BAC clone: B6Ng01-114E14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ccatcttcttgcagtagatgggaatgaacagataactacacttggacaat
gtgcaaagcatggaagagtctgaagcactcagccctaagtgggttgtctt
tatcaagcccttcccttcaaagctcaggaagttatgtgaacaagaaagta
gaaaggctgcaagacctggtgatgttagatgactccaaggaaactgcatt
gttcagacacaacagggctaatgtacatgaacttccagagagactgtgac
agtttgcactggacccaacaagttcaaaccaaacaaaatctcagcacaga
aaaggggaagtggccatagagtgctattcctatctaagaactattctcaa
ttttctgggaaaaaggaaaatcatgttttcctggggtgtgtcactgggca
cattagccacactccaggctagacccacgtccaggaggagttgagcaaca
caaaatggactctgtgttttttatgtgtttgttttgcattttttaaattt
gatttttaaaaatgtttgtttttcagatgggggaagaggggaaggggaga
aagg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_81238129_81238688
seq2: B6Ng01-114E14.g_67_626

seq1  GAATTCCCATCTTCTTGCAGTAGATGGGAATGAACAGATAACTACACTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATCTTCTTGCAGTAGATGGGAATGAACAGATAACTACACTTG  50

seq1  GACAATGTGCAAAGCATGGAAGAGTCTGAAGCACTCAGCCCTAAGTGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATGTGCAAAGCATGGAAGAGTCTGAAGCACTCAGCCCTAAGTGGGT  100

seq1  TGTCTTTATCAAGCCCTTCCCTTCAAAGCTCAGGAAGTTATGTGAACAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTATCAAGCCCTTCCCTTCAAAGCTCAGGAAGTTATGTGAACAAG  150

seq1  AAAGTAGAAAGGCTGCAAGACCTGGTGATGTTAGATGACTCCAAGGAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAGAAAGGCTGCAAGACCTGGTGATGTTAGATGACTCCAAGGAAAC  200

seq1  TGCATTGTTCAGACACAACAGGGCTAATGTACATGAACTTCCAGAGAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTGTTCAGACACAACAGGGCTAATGTACATGAACTTCCAGAGAGAC  250

seq1  TGTGACAGTTTGCACTGGACCCAACAAGTTCAAACCAAACAAAATCTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACAGTTTGCACTGGACCCAACAAGTTCAAACCAAACAAAATCTCAG  300

seq1  CACAGAAAAGGGGAAGTGGCCATAGAGTGCTATTCCTATCTAAGAACTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAAAGGGGAAGTGGCCATAGAGTGCTATTCCTATCTAAGAACTAT  350

seq1  TCTCAATTTTCTGGGAAAAAGGAAAATCATGTTTTCCTGGGGTGTGTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAATTTTCTGGGAAAAAGGAAAATCATGTTTTCCTGGGGTGTGTCAC  400

seq1  TGGGCACATTAGCCACACTCCAGGCTAGACCCACGTCCAGGAGGAGTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCACATTAGCCACACTCCAGGCTAGACCCACGTCCAGGAGGAGTTGA  450

seq1  GCAACACAAAATGGACTCTGTGTTTTTTATGTGTTTGTTTTGCATTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACACAAAATGGACTCTGTGTTTTTTATGTGTTTGTTTTGCATTTTTT  500

seq1  AAATTTGATTTTTAAAAATGTTTGTTTTTCAGATGGGGGAAGAGGGGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGATTTTTAAAAATGTTTGTTTTTCAGATGGGGGAAGAGGGGAAG  550

seq1  GGGAGAAAGG  560
      ||||||||||
seq2  GGGAGAAAGG  560