BAC Information

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BAC

Clone NameB6Ng01-114P07
Chromosome13 (Build37)
Map Location 82,784,267 - 82,785,409
singlet/doubletsinglet
Overlap genenone
Upstream geneLysmd3, Polr3g, 2900024O10Rik, Cetn3, LOC238756
Downstream geneLOC667018, Mef2c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114P07.bB6Ng01-114P07.g
ACCDH920344DH920345
length1,2481,146
definitionDH920344|Mus musculus domesticus DNA, BAC clone: B6Ng01-114P07, 5' end.DH920345|Mus musculus domesticus DNA, BAC clone: B6Ng01-114P07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctacatcctgatttgcaagcagcagaaggagactgtgtttcacac
tgactgtagcttgagtggaggagttctcaaagctcacccctacagtgaca
cacttccttcaacaaggccatgcccagtacaacaaggatatactttttaa
tagttacactctatataaaccaagcattcacccaagtctatgagggcaat
tcctattcaaaccacccatgtttataaataaacagtctagaacacatcat
aatcaggatttctatagtaataatataagatttagtaaaaatataactaa
agactagaaactcacaatagagttatataagggtgtgcttactttctaga
gtggagcagtacaaactattgctatgttcagtctctactcctcattttct
aagcctgcactgtgtgttttgagatgatcacaaagctgtattaagaatta
taaacaggaaaaaataatgacacttctaacctgagatttgtttttgtatt
ttgttttttatatttctttattagatatcttctttatttacatttcaaat
gttattccctttcctggtttccactctgaaaactcctatcctcccccccc
acccccaccccctgttcaccaactgacccacttctgcatcctggccctgg
tattcctttatactgggccatataaccttcacaggaccaagggcctctcc
tcccattgtgaccaactaggccatcctctgctacatatgcagctggagcc
atgagtcccaccatgtgttggtggtttagctccagagagctctggagggt
actggttagttcatattgttgttcctctatgggactgcaaaccccttcag
ctccttgggtactttctctagctccctcattggggaccctgtgctcaatt
caatggatagctgtgaggatccacttctgtattagtcagcactgacagag
cctctcagagatagctgctgtcagctgtcagcagctcttgttgtatccac
aatagtgtctgggtttgtataagctggtatacattgctgactcagacttg
ttttagaaggagccagagaggatggcttaggtcaaaacaaaccaacttct
tcctcagcctggctaggttatcacataggcagtattatggaaaccacaat
gctcatcatttgtaactgtcctgtatttccagatatactccaatccataa
ttgatttcggcagagggtgtaatatctgtcgagagtctcacatgttag
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctacaacaatcacagctctaggagtt
ggcatttcaagtaagatattagtaatattctctcaattgcttcctgaaat
tattatgggattgggctagtttgatgcttattaattataatttgaggagt
aaaataaaaattgaaaaagtgttgtaagtgtgttgaatatgtatgaacgg
tgacacaagggagacagagagacagagagaaggactagaaggaggtaata
tgatattatttattaatataaatggatgataaatttaatttttattataa
gaatgtatttatcccctggttctccaaaattgagtctttgtctcatcatg
ttaatgctttacttgatttattttgtaatagataggcaaataaaaaattt
aagaatattaaaaatacctagttctttgactgaaatatatcaaatctctc
aaggtaatagtttctttcaaaatttccatcaccctcatttaaatttataa
ttgcttaggcaataattagaggcaaataagccagtgccagcatcaattta
tcctttcaaaatttctcagaccaacacaaggatgatataatttctcatta
ttttttcattatttcatgtatgcactcattcaacaagagatttctgtata
ctgagtctgtatcagatgccatttgttatatatactctgtaccaataaac
agaatatgtttttataactctgaatttttatataatttataattattgga
aagaaatctttatggtaaaattaaaagtgaccatctgaagaaaaatgtag
ctaggtataatagatgctggatatgacctgtttgagaatttctgctactg
aagttgatgacttcactatggtgatgtcatttgctcagtttatgaatatc
aaaccatacaggtaggaatatttcatgtgcaatgcttaaactcagatagt
ttactgctacctttgagatgttttaaacatttattttacttttacaaaat
gcattttcttgggaggatggaatgaacatgtgagtattggatatatgctg
atcgagaaaggctccacatcccttgcctttttgtttaaggctttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_82784267_82785409
seq2: B6Ng01-114P07.g_67_1212

seq1  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAAGGGGGTTATTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTTAAGGGGGTTATTTGATT  50

seq1  TTCTGAGGTCCACCTTCTTGAGTTCTACAACAATCACAGCTCTAGGAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGGTCCACCTTCTTGAGTTCTACAACAATCACAGCTCTAGGAGTT  100

seq1  GGCATTTCAAGTAAGATATTAGTAATATTCTCTCAATTGCTTCCTGAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTTCAAGTAAGATATTAGTAATATTCTCTCAATTGCTTCCTGAAAT  150

seq1  TATTATGGGATTGGGCTAGTTTGATGCTTATTAATTATAATTTGAGGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATGGGATTGGGCTAGTTTGATGCTTATTAATTATAATTTGAGGAGT  200

seq1  AAAATAAAAATTGAAAAAGTGTTGTAAGTGTGTTGAATATGTATGAACGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAAATTGAAAAAGTGTTGTAAGTGTGTTGAATATGTATGAACGG  250

seq1  TGACACAAGGGAGACAGAGAGACAGAGAGAAGGACTAGAAGGAGGTAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACAAGGGAGACAGAGAGACAGAGAGAAGGACTAGAAGGAGGTAATA  300

seq1  TGATATTATTTATTAATATAAATGGATGATAAATTTAATTTTTATTATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTATTTATTAATATAAATGGATGATAAATTTAATTTTTATTATAA  350

seq1  GAATGTATTTATCCCCTGGTTCTCCAAAATTGAGTCTTTGTCTCATCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTATTTATCCCCTGGTTCTCCAAAATTGAGTCTTTGTCTCATCATG  400

seq1  TTAATGCTTTACTTGATTTATTTTGTAATAGATAGGCAAATAAAAAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGCTTTACTTGATTTATTTTGTAATAGATAGGCAAATAAAAAATTT  450

seq1  AAGAATATTAAAAATACCTAGTTCTTTGACTGAAATATATCAAATCTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATATTAAAAATACCTAGTTCTTTGACTGAAATATATCAAATCTCTC  500

seq1  AAGGTAATAGTTTCTTTCAAAATTTCCATCACCCTCATTTAAATTTATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAATAGTTTCTTTCAAAATTTCCATCACCCTCATTTAAATTTATAA  550

seq1  TTGCTTAGGCAATAATTAGAGGCAAATAAGCCAGTGCCAGCATCAATTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTAGGCAATAATTAGAGGCAAATAAGCCAGTGCCAGCATCAATTTA  600

seq1  TCCTTTCAAAATTTCTCAGACCAACACAAGGATGATATAATTTCTCATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCAAAATTTCTCAGACCAACACAAGGATGATATAATTTCTCATTA  650

seq1  TTTTTTCATTATTTCATGTATGCACTCATTCAACAAGAGATTTCTGTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCATTATTTCATGTATGCACTCATTCAACAAGAGATTTCTGTATA  700

seq1  CTGAGTCTGTATCAGATGCCATTTGTTATATATACTCTGTACCAATAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTCTGTATCAGATGCCATTTGTTATATATACTCTGTACCAATAAAC  750

seq1  AGAATATGTTTTTATAACTCTGAATTTTTATATAATTTATAATTATTGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATGTTTTTATAACTCTGAATTTTTATATAATTTATAATTATTGGA  800

seq1  AAGAAATCTTTATGGTAAAATTAAAAGTGACCATCTGAAGAAAAATGTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATCTTTATGGTAAAATTAAAAGTGACCATCTGAAGAAAAATGTAG  850

seq1  CTAGGTATAATAGATGCTGGATATGACCTGTTTGAGAATTTCTGCTACTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTATAATAGATGCTGGATATGACCTGTTTGAGAATTTCTGCTACTG  900

seq1  AAGTTGATGACTTCACTATGGTGATGTCATTTGCTCAGTTTAATGAATAT  950
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AAGTTGATGACTTCACTATGGTGATGTCATTTGCTCAGTTT-ATGAATAT  949

seq1  CAAACCAATAACAGGTAGGAATATTTCATGTGCAAATGCTTAAACTCAGA  1000
      |||||||   ||||||||||||||||||||||| ||||||||||||||| 
seq2  CAAACCA--TACAGGTAGGAATATTTCATGTGC-AATGCTTAAACTCAG-  995

seq1  ATAGTTTTACTGCTACCTTTTGAGATGTTTTTAAACATTTATTTTACTTT  1050
      |||| |||||||||||| ||||||||| ||||||||||||||||||||||
seq2  ATAG-TTTACTGCTACC-TTTGAGATG-TTTTAAACATTTATTTTACTTT  1042

seq1  TAC-ATATGCATTTTTCTTGGGAGGATGGAAAATGAACATGTGAGTATT-  1098
      ||| | ||||| |||||||||||||||||  |||||||||||||||||| 
seq2  TACAAAATGCA-TTTTCTTGGGAGGATGG--AATGAACATGTGAGTATTG  1089

seq1  GATATATGCTGAATCCAGAAGAGGCTCCACATCCCCTGGCTTTGT-----  1143
      ||||||||||| ||| |||| |||||||||||||| || |||| |     
seq2  GATATATGCTG-ATCGAGAA-AGGCTCCACATCCCTTGCCTTTTTGTTTA  1137

seq1  ---------  1143
               
seq2  AGGCTTTGT  1146