BAC Information

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BAC

Clone NameB6Ng01-115B07
Chromosome13 (Build37)
Map Location 12,502,608 - 12,503,779
singlet/doubletsinglet
Overlap geneHeatr1
Upstream geneZp4, Ryr2, LOC100039678, Mtr, LOC100039826, Actn2, EG432725
Downstream geneLOC546246, Lgals8, LOC100039900, Edaradd, Ero1lb, LOC664862, EG238507, LOC100039744, EG630757, Prl2c3, LOC100039999, LOC100039754, Prl2c2, LOC434483, LOC674723, Prl2c5, LOC630611, LOC100039786, LOC385049, LOC630663, LOC100040108, Gpr137b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115B07.bB6Ng01-115B07.g
ACCDH920436DH920437
length1,0661,149
definitionDH920436|Mus musculus domesticus DNA, BAC clone: B6Ng01-115B07, 5' end.DH920437|Mus musculus domesticus DNA, BAC clone: B6Ng01-115B07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacatcatgaaaaattttatgtgaattttaaaaattattttagca
tataaaataatgtgtcgagatttgatctatttctgtgttttgtcatgcta
aattctgtatcccatggtctaggtgcctcaagaggagggaattctcatgt
atgccaatttttgttgtgcaaaccttgcttttaacataagactattggtt
aataaagatgcctacagcctgtagctaggcagaaaagagacagttcctgg
gcttggggtcggaggaggaggaaacacaaggagagagagcagaagaagga
aaaaaggcaccatggggaggtggatcaaaagctcatggccatgaggaatg
gcctgctggaataggagcagcccaggcagaacatggcaagtgatatccag
ggttactgccagggaagtagataaactagcacagagggtagattctgccc
agctctgatgctttaaggcttgttataaatacaaaggttttgtgtctttt
atttgggaactaaatgatctaaggtagggtagaaacccccaaataatatt
tactgcaacaataatggtttcattatgacactttcatacatgcatatgat
atatgatatgatgcctcctcatattcattcattaccctgctactccaccc
ctctcctactagccacttcccccaccacacacacacaaacacacacacac
acacacacacacacacacacacacattaaatctagattctctattagaaa
aaaaatgcaataattttctttttcctacatcattattgtcttattagggt
ttctattgccatgacaaaaacaccaagatgaaaaagcaacttggggagga
aggggtaattcagcttacacttccagatcacagtccatccctggaggaag
taaggacagaaattcaagcagagctggaactcagaggcagggttaagtgc
aagactatgagggatgccgttactggcttgcttcacatggcttactccct
gctttctaagaactcagaactaactagatagaagatgggtatcactcacc
atgtacccaggctcct
gaattctgctgacttgaacatgtgtctgaatcaaaggtactttcatgtct
tccaggttcagggtgcttgagctagcagcaaacatactaattaaagaaga
gatactaagtaaaaatgaccagttggcaaatcaggtggttgtccagttgc
tgccttttatggttattactagtaatgatatagagtctcctgatatgaaa
attgctatacatttgtcaaaatcaggaatttgttctctgcatcctctatt
aagaggctggaaagaaggtaagaaagtcagttgttaaagtcatagttaaa
cgcccacttctgttctacaaggcttttcccctcctcactttttgctgttg
ttccattctttttttttgtttttaagatttatttattatcgtaaataagt
acactgtagccatcgccagatgtaccagaagagggcatcagatctcttta
cagttggttgtgagccaccatgtggttgctgggatttgaactcatgacct
ttggaagagcagtcagtcagtgctctgaccccctgagccatctcatcagc
cctcttttcttattattttttgttgttgttgttgttgttccattcttaaa
agctgttttgctttaatcaaatacaaagggaattttatttattcctttga
gaccatggctgagagttataactcaagctggcctggaacaactttataaa
acagatataaattttatagagaagataagaaaatttgaaattagattaaa
agtaaaaataaaaggcaagccttggtagagaactagtaaatattttatct
aaatgtcttacttttccccaatacttttatgtggatgccagtgatacagt
gatatagtattcaaacccttttttttacagctcttgaaaatgttattaaa
agcagaaaatcaagagaaataattggtgtaggaaaccagaagatggttca
gctgctgggcagcatttaagttaggagagcgctctacagtgtggagctgg
tatgttgcacccctcccctccactccgcttctgctctcagctatagctcc
cacttctggcttaggtggctctttctgagtttgctgctgtcctttcttac
acctgtttgcttaaacaaatcagagtattttgttattccttgggccatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_12502608_12503779
seq2: B6Ng01-115B07.g_67_1215

seq1  GAATTCTGCTGACTTGAACATGTGTCTGAATCAAAGGTACTTTCATGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCTGACTTGAACATGTGTCTGAATCAAAGGTACTTTCATGTCT  50

seq1  TCCAGGTTCAGGGTGCTTGAGCTAGCAGCAAACATACTAATTAAAGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTTCAGGGTGCTTGAGCTAGCAGCAAACATACTAATTAAAGAAGA  100

seq1  GATACTAAGTAAAAATGACCAGTTGGCAAATCAGGTGGTTGTCCAGTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTAAGTAAAAATGACCAGTTGGCAAATCAGGTGGTTGTCCAGTTGC  150

seq1  TGCCTTTTATGGTTATTACTAGTAATGATATAGAGTCTCCTGATATGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTTATGGTTATTACTAGTAATGATATAGAGTCTCCTGATATGAAA  200

seq1  ATTGCTATACATTTGTCAAAATCAGGAATTTGTTCTCTGCATCCTCTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTATACATTTGTCAAAATCAGGAATTTGTTCTCTGCATCCTCTATT  250

seq1  AAGAGGCTGGAAAGAAGGTAAGAAAGTCAGTTGTTAAAGTCATAGTTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGCTGGAAAGAAGGTAAGAAAGTCAGTTGTTAAAGTCATAGTTAAA  300

seq1  CGCCCACTTCTGTTCTACAAGGCTTTTCCCCTCCTCACTTTTTGCTGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCACTTCTGTTCTACAAGGCTTTTCCCCTCCTCACTTTTTGCTGTTG  350

seq1  TTCCATTCTTTTTTTTTGTTTTTAAGATTTATTTATTATCGTAAATAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTCTTTTTTTTTGTTTTTAAGATTTATTTATTATCGTAAATAAGT  400

seq1  ACACTGTAGCCATCGCCAGATGTACCAGAAGAGGGCATCAGATCTCTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTAGCCATCGCCAGATGTACCAGAAGAGGGCATCAGATCTCTTTA  450

seq1  CAGTTGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCATGACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCATGACCT  500

seq1  TTGGAAGAGCAGTCAGTCAGTGCTCTGACCCCCTGAGCCATCTCATCAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGAGCAGTCAGTCAGTGCTCTGACCCCCTGAGCCATCTCATCAGC  550

seq1  CCTCTTTTCTTATTATTTTTTGTTGTTGTTGTTGTTGTTCCATTCTTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTTTCTTATTATTTTTTGTTGTTGTTGTTGTTGTTCCATTCTTAAA  600

seq1  AGCTGTTTTGCTTTAATCAAATACAAAGGGAATTTTATTTATTCCTTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTTTGCTTTAATCAAATACAAAGGGAATTTTATTTATTCCTTTGA  650

seq1  GACCATGGCTGAGAGTTATAACTCAAGCTGGCCTGGAACAACTTTATAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATGGCTGAGAGTTATAACTCAAGCTGGCCTGGAACAACTTTATAAA  700

seq1  ACAGATATAAATTTTATAGAGAAGATAAGAAAATTTGAAATTAGATTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATATAAATTTTATAGAGAAGATAAGAAAATTTGAAATTAGATTAAA  750

seq1  AGTAAAAATAAAAGGCAAGCCTTGGTAGAGAACTAGTAAATATTTTATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAAATAAAAGGCAAGCCTTGGTAGAGAACTAGTAAATATTTTATCT  800

seq1  AAATGTCTTACTTTTCCCCAATAC-TTTATGTGGATGCCAGTGATACAGT  849
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AAATGTCTTACTTTTCCCCAATACTTTTATGTGGATGCCAGTGATACAGT  850

seq1  GATATAGTATTCAAACCTTTTTTTTTACAGCTCTTGAAAATGTTATTAAA  899
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GATATAGTATTCAAACCCTTTTTTTTACAGCTCTTGAAAATGTTATTAAA  900

seq1  AGCAGAAAATCAAGAGAAATAATTGGTGTAGGAAACCAGAAGATGGTTCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAAATCAAGAGAAATAATTGGTGTAGGAAACCAGAAGATGGTTCA  950

seq1  GCTGCTGGGCAGCAATTTAAGTTTAGGAGAGCGCTCTACAGTGTTGAAGC  999
      ||||||||||||| ||||||| ||||||||||||||||||||| || |||
seq2  GCTGCTGGGCAGC-ATTTAAG-TTAGGAGAGCGCTCTACAGTG-TGGAGC  997

seq1  TGGTATGTTGCCACCCCTCCCCTCCACTCCGCCTTCTGCTCCTCAGGCTT  1049
      |||||||||| |||||||||||||||||||| |||||||| |||||   |
seq2  TGGTATGTTG-CACCCCTCCCCTCCACTCCG-CTTCTGCT-CTCAGCTAT  1044

seq1  ATTAGGCTCCCACTTCTGCTCTACGTGGCTTCTTTTCTGAAGTTTTGCTG  1099
      |    |||||||||||||   || ||||||   |||||||   |||||||
seq2  A----GCTCCCACTTCTGGCTTAGGTGGCT--CTTTCTGA--GTTTGCTG  1086

seq1  CTGTTCCTTTCTTACACCCTGTTTTGCTTTAAACAAATACAAGAGTAATT  1149
      ||| |||||||||||| |||| ||||| ||||||||||   ||||| |||
seq2  CTG-TCCTTTCTTACA-CCTG-TTTGC-TTAAACAAAT--CAGAGT-ATT  1129

seq1  TTGTGTATTCCTTTGGGGCCATG  1172
      |||| ||||||||  ||||||||
seq2  TTGT-TATTCCTT--GGGCCATG  1149