BAC Information

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BAC

Clone NameB6Ng01-115I18
Chromosome13 (Build37)
Map Location 65,687,302 - 65,687,465
singlet/doubletsinglet
Overlap genenone
Upstream genePpia-ps13_866.1, LOC238678, LOC631470, Cntnap3, EG432767, 4930458L03Rik, LOC218301, LOC628515, 4932441B19Rik, Gm274, Hiatl1, LOC100042311, Olfr465-ps1, Olfr466, Nlrp4f, ENSMUSG00000074847, Zfp369, LOC100042347, LOC100042341, LOC665738, EG665742, LOC665750, LOC665753, EG544944, EG665767, LOC665777, EG628648, LOC665809, LOC100042404
Downstream geneLOC628722, LOC665851, Vmn2r-ps99, LOC628794, EG665897, LOC100041855, EG628746, LOC100042434, LOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115I18.bB6Ng01-115I18.g
ACCDH920781DH920782
length463161
definitionDH920781|Mus musculus domesticus DNA, BAC clone: B6Ng01-115I18, 5' end.DH920782|Mus musculus domesticus DNA, BAC clone: B6Ng01-115I18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
acagggaaatcatcactcagggacttcaggcagaaaactagccagtcagc
ctctggatagacaaggctcaacagttcagagaaccaggccatcgcaaata
gttcacagacctgcaaggaagacatgcagatccctgccccccaccccacc
cctcccccagccccacccaaacatagggagaaaaggcagtgtgggggagg
gggaggtgctgtgagagaatttagatagctcgaagaaataaatagctgga
gacttcattcatttacttattttattgagtatatggtgaaagagggaaaa
tggctcaaaaaggagggagggcagactgtcttcccatgctgggatcattc
atgccttaagaaggaatgtaggaggctggagagatggctcatcggtttag
agccctgactgctcttctgaagatcctgagttcaaatcccagcaaccaca
tggtgggtggttt
ccctatccctaatccagattggtggaataacttggtatagatgtttgtgc
attaaaaaccctgtaggatcttcactctaggtcactgttcagcactggaa
cctgaattgtggccctgagtgataggtcctgggacatatgcagttctgca
cagacagacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_65687302_65687465
seq2: B6Ng01-115I18.g_75_234 (reverse)

seq1  CTGTCTATCTGTGCAGAACTGCATAT------GGACTTATCACTCAGGGC  44
      |||||| |||||||||||||||||||      |||| |||||||||||||
seq2  CTGTCTGTCTGTGCAGAACTGCATATGTCCCAGGACCTATCACTCAGGGC  50

seq1  CACAATTCAGGTTCCAGAGGTGAACTGTGACCTAGAGTGAAGATCCTACA  94
      ||||||||||||||||| | ||||| ||||||||||||||||||||||||
seq2  CACAATTCAGGTTCCAGTGCTGAACAGTGACCTAGAGTGAAGATCCTACA  100

seq1  GGGTTATTAATGCCTAAAATCCACAAACATCTATACTAAGTTATTCCACC  144
      ||||| ||||||         ||||||||||||||| |||||||||||||
seq2  GGGTTTTTAATG---------CACAAACATCTATACCAAGTTATTCCACC  141

seq1  AATCTGGCCTTAGGGATAGG  164
      |||||||  |||||||||||
seq2  AATCTGG-ATTAGGGATAGG  160