BAC Information

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BAC

Clone NameB6Ng01-115K20
Chromosome13 (Build37)
Map Location 75,754,394 - 75,870,595
singlet/doubletdoublet
Overlap geneLOC100042986, Ell2
Upstream geneArts1, Cast, LOC622204, EG544954, Pcsk1, LOC672443, LOC666764, LOC100042606
Downstream geneLOC666786, Glrx, Rhobtb3, LOC666553, LOC622313, Spata9, Rfesd, LOC100043008, Gpr150, Arsk, AK129128, Gm276, Mctp1, LOC666603
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115K20.bB6Ng01-115K20.g
ACCDH920880DH920881
length1,102992
definitionDH920880|Mus musculus domesticus DNA, BAC clone: B6Ng01-115K20, 5' end.DH920881|Mus musculus domesticus DNA, BAC clone: B6Ng01-115K20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,869,490 - 75,870,595)(75,754,394 - 75,755,386)
sequence
gaattctctctaaaactctctctctccttttactagaagagagttgcctt
ttgaaaacccttttagtacaaatttctagtgctggtgctctgacagaaga
aggctggaagaggtaatgggaagccacctaaacagctcctacatggcacg
acccaaacaatcacctacttgttttcattcctttctatccaaccaaattc
tcaaacaataaacacagagctatccttgatccccctctactcttcccact
gacctcttccatatcatccaaatcctggtaattctgttaaagcagccatt
ggcaaagaatgttaaaatgcaaatctgaccacacgactgactcttagatt
aaaacagatgatgctctcctgcagtgtctgaaagccattgattgtaacct
actggaagataatagcattagttcagtggactttggccaggattcttttt
actattttaaatttccttctatttatttttatttgtttagtatgggggta
ttttgtctgcatgtttgtctacgtaccatgtgtgtgcctggtgcctgcag
aggccaaaagagggcatcagaagagcccctagaactggtgttacagatgg
ttgttagctgccaaatagttactaaaaaccaaacccaggaactctgcaag
agcagagtgctcctgagtgagtcatgtctccagcctctttagaacatttc
tttttaattatttacaggattctttttaaatgagagaaaaaaaccaaaca
aacaaaaaacaaaattacggtgtacagatgaagttaaggtaaaataaatc
ccaggcagtggaacttttgtttcagcttcatgaatgtgcatatccatatg
tcttaaggcttcaagtgaaacgttttgtcttggtgtgtgctaatgagtgt
gtgtgtgtgtatgtgtgtgtgtatgatatgtgcatatatgattgcttaag
tgcccatattgtgaccagagaagcagaggtctacatggaatatcttcctc
tataactttcaaagaaaaaaaacatttttttttttgagacagtgtttctc
actaaaacttggagcatggagaaccaaagtactactaacctctgtcgtct
ag
gaattcaatgaattgaagtatgaatttttctgtctcaagcattgtgaagt
atagcgctctgtggattccctgagtcacaacatgacaagggtcaactatt
gctactttactatgcagtatgtatgcaccaagcaggtaggattttttttc
tatgttccgtgtgacacatgcattgctgactttgttttttgttttttgtt
tgtttgtttgtttgtttttcaattttcaatggctttattattattaacac
caaattgaggagaatctatagttcaccttttctacatcattcccataaat
ttttgttccatttaatgagtgatggccttgcttcccttctgtggtatgcc
tgcctagcttttttatctccttgcatagaaagaaattgctattaggacta
tctgtgtgtttggcttagtattgtttcacagcccttagctgacttaaatg
aatatagcatttgattaatcaatagagtctcctatagagcgaatttcatg
aatctacagaatatattgaacacttactttccaagtaatggaatctagag
gtggggtctgagcagtagttaaattaggaaggcagaatagcatgactaac
acagccatctccatactgagagacctggaagtttccttatctttttttgc
atcccattttcctccatgtgagtatcataaaacaagaagagaactcagat
cacatcaacactctgacttcagaagtctttgtgtcttccaaaattatgtg
tacaagtgtgttgattaagctacttactgttaaggtggatgtattatagg
agcgcaaattgatcaagacagacacaacatcttgtgttggttttccttct
tgcttttagaccttggtcaagaatttggaaatgttttctaggtctacaat
aaatccctttttatcagtttgttggtttagttagtcatgtgtgtgtggca
catatgagtgaatgtgtgagtatgtatgtgtgtgagtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_75869490_75870595
seq2: B6Ng01-115K20.b_48_1149 (reverse)

seq1  CTAGACGACAGAGG-TAGTAGTACCTTGGGTCTCCATGCTCC-AGTTTTA  48
      |||||||||||||| ||||||||| |||| |||||||||||| |||||||
seq2  CTAGACGACAGAGGTTAGTAGTACTTTGGTTCTCCATGCTCCAAGTTTTA  50

seq1  GTGAGAAACACTGTCTCAAAAAAAAAAAAATGTTTTTTTTCTTTTGGAAA  98
      |||||||||||||||||  |||||||||||||||||||||||||  ||||
seq2  GTGAGAAACACTGTCTC--AAAAAAAAAAATGTTTTTTTTCTTT--GAAA  96

seq1  GTAATAGAGGAAGATATTCCATGTAGACCTCTGGCTTCTCTGGTCACAAA  148
      || ||||||||||||||||||||||||||||| |||||||||||||| ||
seq2  GTTATAGAGGAAGATATTCCATGTAGACCTCT-GCTTCTCTGGTCAC-AA  144

seq1  TATGGGCACTTAAGCAATCATATATGCACATATCATACACACACACATAC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGCACTTAAGCAATCATATATGCACATATCATACACACACACATAC  194

seq1  ACACACACACACTCATTAGCACACACCAAGACAAAACGTTTCACTTGAAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACTCATTAGCACACACCAAGACAAAACGTTTCACTTGAAG  244

seq1  CCTTAAGACATATGGATATGCACATTCATGAAGCTGAAACAAAAGTTCCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAGACATATGGATATGCACATTCATGAAGCTGAAACAAAAGTTCCA  294

seq1  CTGCCTGGGATTTATTTTACCTTAACTTCATCTGTACACCGTAATTTTGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGGGATTTATTTTACCTTAACTTCATCTGTACACCGTAATTTTGT  344

seq1  TTTTTGTTTGTTTGGTTTTTTTCTCTCATTTAAAAAGAATCCTGTAAATA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTGTTTGGTTTTTTTCTCTCATTTAAAAAGAATCCTGTAAATA  394

seq1  ATTAAAAAGAAATGTTCTAAAGAGGCTGGAGACATGACTCACTCAGGAGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAAGAAATGTTCTAAAGAGGCTGGAGACATGACTCACTCAGGAGC  444

seq1  ACTCTGCTCTTGCAGAGTTCCTGGGTTTGGTTTTTAGTAACTATTTGGCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGCTCTTGCAGAGTTCCTGGGTTTGGTTTTTAGTAACTATTTGGCA  494

seq1  GCTAACAACCATCTGTAACACCAGTTCTAGGGGCTCTTCTGATGCCCTCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACAACCATCTGTAACACCAGTTCTAGGGGCTCTTCTGATGCCCTCT  544

seq1  TTTGGCCTCTGCAGGCACCAGGCACACACATGGTACGTAGACAAACATGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCCTCTGCAGGCACCAGGCACACACATGGTACGTAGACAAACATGC  594

seq1  AGACAAAATACCCCCATACTAAACAAATAAAAATAAATAGAAGGAAATTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAATACCCCCATACTAAACAAATAAAAATAAATAGAAGGAAATTT  644

seq1  AAAATAGTAAAAAGAATCCTGGCCAAAGTCCACTGAACTAATGCTATTAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGTAAAAAGAATCCTGGCCAAAGTCCACTGAACTAATGCTATTAT  694

seq1  CTTCCAGTAGGTTACAATCAATGGCTTTCAGACACTGCAGGAGAGCATCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGTAGGTTACAATCAATGGCTTTCAGACACTGCAGGAGAGCATCA  744

seq1  TCTGTTTTAATCTAAGAGTCAGTCGTGTGGTCAGATTTGCATTTTAACAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTTAATCTAAGAGTCAGTCGTGTGGTCAGATTTGCATTTTAACAT  794

seq1  TCTTTGCCAATGGCTGCTTTAACAGAATTACCAGGATTTGGATGATATGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCCAATGGCTGCTTTAACAGAATTACCAGGATTTGGATGATATGG  844

seq1  AAGAGGTCAGTGGGAAGAGTAGAGGGGGATCAAGGATAGCTCTGTGTTTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGTCAGTGGGAAGAGTAGAGGGGGATCAAGGATAGCTCTGTGTTTA  894

seq1  TTGTTTGAGAATTTGGTTGGATAGAAAGGAATGAAAACAAGTAGGTGATT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGAGAATTTGGTTGGATAGAAAGGAATGAAAACAAGTAGGTGATT  944

seq1  GTTTGGGTCGTGCCATGTAGGAGCTGTTTAGGTGGCTTCCCATTACCTCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGGTCGTGCCATGTAGGAGCTGTTTAGGTGGCTTCCCATTACCTCT  994

seq1  TCCAGCCTTCTTCTGTCAGAGCACCAGCACTAGAAATTTGTACTAAAAGG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCCTTCTTCTGTCAGAGCACCAGCACTAGAAATTTGTACTAAAAGG  1044

seq1  GTTTTCAAAAGGCAACTCTCTTCTAGTAAAAGGAGAGAGAGAGTTTTAGA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAAAAGGCAACTCTCTTCTAGTAAAAGGAGAGAGAGAGTTTTAGA  1094

seq1  GAGAATTC  1106
      ||||||||
seq2  GAGAATTC  1102

seq1: chr13_75754394_75755386
seq2: B6Ng01-115K20.g_69_1060

seq1  GAATTCAATGAATTGAAGTATGAATTTTTCTGTCTCAAGCATTGTGAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGAATTGAAGTATGAATTTTTCTGTCTCAAGCATTGTGAAGT  50

seq1  ATAGCGCTCTGTGGATTCCCTGAGTCACAACATGACAAGGGTCAACTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCGCTCTGTGGATTCCCTGAGTCACAACATGACAAGGGTCAACTATT  100

seq1  GCTACTTTACTATGCAGTATGTATGCACCAAGCAGGTAGGATTTTTTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTTTACTATGCAGTATGTATGCACCAAGCAGGTAGGATTTTTTTTC  150

seq1  TATGTTCCGTGTGACACATGCATTGCTGACTTTGTTTTTTGTTTTTTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTCCGTGTGACACATGCATTGCTGACTTTGTTTTTTGTTTTTTGTT  200

seq1  TGTTTGTTTGTTTGTTTTTCAATTTTCAATGGCTTTATTATTATTAACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTGTTTGTTTTTCAATTTTCAATGGCTTTATTATTATTAACAC  250

seq1  CAAATTGAGGAGAATCTATAGTTCACCTTTTCTACATCATTCCCATAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGAGGAGAATCTATAGTTCACCTTTTCTACATCATTCCCATAAAT  300

seq1  TTTTGTTCCATTTAATGAGTGATGGCCTTGCTTCCCTTCTGTGGTATGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTCCATTTAATGAGTGATGGCCTTGCTTCCCTTCTGTGGTATGCC  350

seq1  TGCCTAGCTTTTTTATCTCCTTGCATAGAAAGAAATTGCTATTAGGACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAGCTTTTTTATCTCCTTGCATAGAAAGAAATTGCTATTAGGACTA  400

seq1  TCTGTGTGTTTGGCTTAGTATTGTTTCACAGCCCTTAGCTGACTTAAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTGTTTGGCTTAGTATTGTTTCACAGCCCTTAGCTGACTTAAATG  450

seq1  AATATAGCATTTGATTAATCAATAGAGTCTCCTATAGAGCGAATTTCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGCATTTGATTAATCAATAGAGTCTCCTATAGAGCGAATTTCATG  500

seq1  AATCTACAGAATATATTGAACACTTACTTTCCAAGTAATGGAATCTAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTACAGAATATATTGAACACTTACTTTCCAAGTAATGGAATCTAGAG  550

seq1  GTGGGGTCTGAGCAGTAGTTAAATTAGGAAGGCAGAATAGCATGACTAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGTCTGAGCAGTAGTTAAATTAGGAAGGCAGAATAGCATGACTAAC  600

seq1  ACAGCCATCTCCATACTGAGAGACCTGGAAGTTTCCTTATCTTTTTTTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCATCTCCATACTGAGAGACCTGGAAGTTTCCTTATCTTTTTTTGC  650

seq1  ATCCCATTTTCCTCCATGTGAGTATCATAAAACAAGAAGAGAACTCAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCATTTTCCTCCATGTGAGTATCATAAAACAAGAAGAGAACTCAGAT  700

seq1  CACATCAACACTCTGACTTCAGAAGTCTTTGTGTCTTCCAAAATTATGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCAACACTCTGACTTCAGAAGTCTTTGTGTCTTCCAAAATTATGTG  750

seq1  TACAAGTGTGTTGATTAAGCTACTTACTGTTAAGGTGGATGTATTATAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGTGTGTTGATTAAGCTACTTACTGTTAAGGTGGATGTATTATAGG  800

seq1  AGCGCAAATTGATCAAGACAGACACAACATCTTGTGTTGGTTTTCCTTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCAAATTGATCAAGACAGACACAACATCTTGTGTTGGTTTTCCTTCT  850

seq1  TGCTTTTAGACCTTGGTCAAGAATTTGGAAATGTTTTCTAGGTCTACAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTAGACCTTGGTCAAGAATTTGGAAATGTTTTCTAGGTCTACAAT  900

seq1  AAATCCCTTTTTATCAGTTTGTTGGTTTAGTTAGTCATTGTGTGTGTGGC  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAATCCCTTTTTATCAGTTTGTTGGTTTAGTTAGTCA-TGTGTGTGTGGC  949

seq1  ACATATGAGTGAATGTGTGAGTATGTATGTGTGTGAGTGTGTG  993
      |||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATGAGTGAATGTGTGAGTATGTATGTGTGTGAGTGTGTG  992