BAC Information

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BAC

Clone NameB6Ng01-115O14
Chromosome13 (Build37)
Map Location 103,517,005 - 103,686,334
singlet/doubletdoublet
Overlap geneMast4
Upstream genePik3r1, Cd180
Downstream geneEG621312, EG432800, LOC432801, LOC100040045, Ppia-ps13_1282.1, Sfrs12, Erbb2ip
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115O14.bB6Ng01-115O14.g
ACCDH921051DH921052
length518145
definitionDH921051|Mus musculus domesticus DNA, BAC clone: B6Ng01-115O14, 5' end.DH921052|Mus musculus domesticus DNA, BAC clone: B6Ng01-115O14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,685,811 - 103,686,334)(103,517,005 - 103,517,149)
sequence
attcaccccaaactagatttgctgtactgctctccagggcaggcaggtgg
ccagtcatctgcatgtcacctgccccggcaaattgaacaaaaggttcaat
ttacatttcccagacatggcatttccctgaatgagagctagctcattgtc
cctgggtagccagagcggcagatgggcaagtagggaagtccagacggctt
tggatagaagttcttatgatagattctgtgaaagaagctggagtgcttat
gaatcataatcctctgtgcggtttggggcttcctgtgtgtggtcagatgt
ttgggtcatggctttagtatgcgctggctgccatatttttactgtgtagc
cttacttctcaatacatgtcagttgggtaaattagccttagaaatcaagg
attttttaagctgagaaaacaatgttgcttttctcaaaaaaaaaaaaaaa
aaagaattaattggtttagtgtgtggatatacatgcaaatatatgggtgt
gtgtgtgtgtgtgtgtgt
tcttttgaacaagatcaactgtccattctcaactgcaaatatgagaaaat
gaccttgtcttttgtaatttgtggtttcagaattcactgaaatgttgctg
tatttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_103685811_103686334
seq2: B6Ng01-115O14.b_47_570 (reverse)

seq1  ACACACACACACACACACACACCCATATATTTGCATGTATATCCACACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACCCATATATTTGCATGTATATCCACACAC  50

seq1  TAAACCAATTAATTCTTTTTTTTTTTTTTTTTTGAGAAAAGCAACATTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCAATTAATTCTTTTTTTTTTTTTTTTTTGAGAAAAGCAACATTGT  100

seq1  TTTCTCAGCTTAAAAAATCCTTGATTTCTAAGGCTAATTTACCCAACTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAGCTTAAAAAATCCTTGATTTCTAAGGCTAATTTACCCAACTGA  150

seq1  CATGTATTGAGAAGTAAGGCTACACAGTAAAAATATGGCAGCCAGCGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATTGAGAAGTAAGGCTACACAGTAAAAATATGGCAGCCAGCGCAT  200

seq1  ACTAAAGCCATGACCCAAACATCTGACCACACACAGGAAGCCCCAAACCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAGCCATGACCCAAACATCTGACCACACACAGGAAGCCCCAAACCG  250

seq1  CACAGAGGATTATGATTCATAAGCACTCCAGCTTCTTTCACAGAATCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGGATTATGATTCATAAGCACTCCAGCTTCTTTCACAGAATCTAT  300

seq1  CATAAGAACTTCTATCCAAAGCCGTCTGGACTTCCCTACTTGCCCATCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGAACTTCTATCCAAAGCCGTCTGGACTTCCCTACTTGCCCATCTG  350

seq1  CCGCTCTGGCTACCCAGGGACAATGAGCTAGCTCTCATTCAGGGAAATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTCTGGCTACCCAGGGACAATGAGCTAGCTCTCATTCAGGGAAATGC  400

seq1  CATGTCTGGGAAATGTAAATTGAACCTTTTGTTCAATTTGCCGGGGCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTGGGAAATGTAAATTGAACCTTTTGTTCAATTTGCCGGGGCAGG  450

seq1  TGACATGCAGATGACTGGCCACCTGCCTGCCCTGGAGAGCAGTACAGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATGCAGATGACTGGCCACCTGCCTGCCCTGGAGAGCAGTACAGCAA  500

seq1  ATCTAGTTTGGGGTGAATGAATTC  524
      ||||||||||||||||||||||||
seq2  ATCTAGTTTGGGGTGAATGAATTC  524

seq1: chr13_103517005_103517149
seq2: B6Ng01-115O14.g_75_219

seq1  TCTTTTGAACAAGATCAACTGTCCATTCTCAACTGCAAATATGAGAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGAACAAGATCAACTGTCCATTCTCAACTGCAAATATGAGAAAAT  50

seq1  GACCTTGTCTTTTGTAATTTGTGGTTTCAGAATTCACTGAAATGTTGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTGTCTTTTGTAATTTGTGGTTTCAGAATTCACTGAAATGTTGCTG  100

seq1  TATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  145
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  145