BAC Information

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BAC

Clone NameB6Ng01-116D12
Chromosome13 (Build37)
Map Location 84,035,597 - 84,200,488
singlet/doubletdoublet
Overlap gene2810049E08Rik, LOC100043119, LOC667081
Upstream geneLOC667018, Mef2c, LOC100043111, LOC623241, LOC432789
Downstream geneLOC667101, Tmem161b, LOC666795, LOC667111, LOC382786, LOC100042841, LOC100042851
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116D12.bB6Ng01-116D12.g
ACCDH921271DH921272
length1,042695
definitionDH921271|Mus musculus domesticus DNA, BAC clone: B6Ng01-116D12, 5' end.DH921272|Mus musculus domesticus DNA, BAC clone: B6Ng01-116D12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,035,597 - 84,036,551)(84,199,794 - 84,200,488)
sequence
gaattctatacccagaaaaaataacttttaaagagaaagatgtttcaaac
atactaaataaagattttgtcattcacaaaccagcaccctagaaaacaaa
gagaagctgtgtgtagtagtgcacacctatgtttctagcactcaggatgc
tactactgaagcaaggattgggagtactgtcctgcttgaactagtaagac
tctgtctcaaaacaacaaacaactcaaagtcataaataaaacagaaacta
aaacttcaaacatgaacagaaaaatcttgaaattgtttaggaaagaagga
tcatacaggaatgaaaagaatgagaaatagctatttcataaataagacat
tactaattattagtctattacctaacatcacttaatgaaattattaattt
gaaattttacttgtatatattatgtaaaggtctctcagaactcaacagta
agtttagaaagggtgggagatttccatcacaaatgattcataattgaaga
gctggaacttcgtaattccctgaatttatcattaaacattttatacatta
tcatcttcctacttaatgacatacaaatattatgtctcgataagacaaga
aaatcaagaagaaggaagaccaacgtgtggatacttcattcctccctaga
atatggaacaaaatacccatagaaggagttacagagacaaagtttggaga
taagacgaaaggatggactatccagagactaccccacctggggatccatc
ccattatcagccaccaaacccagagactattacatatgccagcaagattt
gctgaagggactctgatatagctgtctcatataaagctatgctagtgcct
agcaaatacagaagtggatgctgacagtcatctataggatggaacacagg
gctcccagtagaagagctagagaaaatacccaagtagctgaagggtctgc
aaccctatagtggaacaacactatgaactaccagtatcaccagagttcgt
gtctctagcagcatatgcagcagagatgcctagtcggccatc
gaattcagagatgttatggaccttttagtgtttcaacaaaaagttgagga
ccgtgaagtcagaaatcctctccccaaatgttaagggccaggttgcctgc
tgctgtttctctgtgcagactcatggagacgggtgcctctcagcctttgc
tctgccctctcttctgtgatttctttattttttaaattggccctaccctt
ttctactagatcgcttgatttggccatacttcccttagtacattctcatt
gttgctctcagaacttatatgaggtttggactggtagtgtttttccttat
tttcaaagctttgagattcagatgtgaagagctaagacagttctctggac
atgctcacagattctacccaagaccttaagccatgcttttacacttatgg
gaaaaggaaaaaatatgcacaagcttctgatactaagggcacagcctgga
catacaccttgtcctcttcttcttggcctcatctgccctaaagaatgaat
atattcatccctaaggttgctgcttcaaagtgaccagtgagatgctaaca
ggtcagctggctgtcctgttggacagagggtccataaatcagagaagact
tggtatggttgaaagaagaaggtagtccagcctgaggggagccccctgta
aatctctccaggagctttgttcctggtaggggtaggggtgggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_84035597_84036551
seq2: B6Ng01-116D12.b_43_996

seq1  GAATTCTATACCCAGAAAAAATAACTTTTAAAGAGAAAGATGTTTCAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATACCCAGAAAAAATAACTTTTAAAGAGAAAGATGTTTCAAAC  50

seq1  ATACTAAATAAAGATTTTGTCATTCACAAACCAGCACCCTAGAAAACAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAAATAAAGATTTTGTCATTCACAAACCAGCACCCTAGAAAACAAA  100

seq1  GAGAAGCTGTGTGTAGTAGTGCACACCTATGTTTCTAGCACTCAGGATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCTGTGTGTAGTAGTGCACACCTATGTTTCTAGCACTCAGGATGC  150

seq1  TACTACTGAAGCAAGGATTGGGAGTACTGTCCTGCTTGAACTAGTAAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACTGAAGCAAGGATTGGGAGTACTGTCCTGCTTGAACTAGTAAGAC  200

seq1  TCTGTCTCAAAACAACAAACAACTCAAAGTCATAAATAAAACAGAAACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTCAAAACAACAAACAACTCAAAGTCATAAATAAAACAGAAACTA  250

seq1  AAACTTCAAACATGAACAGAAAAATCTTGAAATTGTTTAGGAAAGAAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCAAACATGAACAGAAAAATCTTGAAATTGTTTAGGAAAGAAGGA  300

seq1  TCATACAGGAATGAAAAGAATGAGAAATAGCTATTTCATAAATAAGACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACAGGAATGAAAAGAATGAGAAATAGCTATTTCATAAATAAGACAT  350

seq1  TACTAATTATTAGTCTATTACCTAACATCACTTAATGAAATTATTAATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAATTATTAGTCTATTACCTAACATCACTTAATGAAATTATTAATTT  400

seq1  GAAATTTTACTTGTATATATTATGTAAAGGTCTCTCAGAACTCAACAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTTACTTGTATATATTATGTAAAGGTCTCTCAGAACTCAACAGTA  450

seq1  AGTTTAGAAAGGGTGGGAGATTTCCATCACAAATGATTCATAATTGAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAGAAAGGGTGGGAGATTTCCATCACAAATGATTCATAATTGAAGA  500

seq1  GCTGGAACTTCGTAATTCCCTGAATTTATCATTAAACATTTTATACATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAACTTCGTAATTCCCTGAATTTATCATTAAACATTTTATACATTA  550

seq1  TCATCTTCCTACTTAATGACATACAAATATTATGTCTCGATAAGACAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTCCTACTTAATGACATACAAATATTATGTCTCGATAAGACAAGA  600

seq1  AAATCAAGAAGAAGGAAGACCAACGTGTGGATACTTCATTCCTCCCTAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAAGAAGAAGGAAGACCAACGTGTGGATACTTCATTCCTCCCTAGA  650

seq1  ATATGGAACAAAATACCCATAGAAGGAGTTACAGAGACAAAGTTTGGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGAACAAAATACCCATAGAAGGAGTTACAGAGACAAAGTTTGGAGA  700

seq1  TAAGACGAAAGGATGGACTATCCAGAGACTACCCCACCTGGGGATCCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACGAAAGGATGGACTATCCAGAGACTACCCCACCTGGGGATCCATC  750

seq1  CCATTATCAGCCACCAAACCCAGAGACTATTACATATGCCAGCAAGATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTATCAGCCACCAAACCCAGAGACTATTACATATGCCAGCAAGATTT  800

seq1  GCTGAAGGGACTCTGATATAGCTGTCTCATATAAAGCTATGCTAGTGCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAGGGACTCTGATATAGCTGTCTCATATAAAGCTATGCTAGTGCCT  850

seq1  AGCAAATACAGAAGTGGATGCTGACAGTCATCTATAGGATGGAACACAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATACAGAAGTGGATGCTGACAGTCATCTATAGGATGGAACACAGG  900

seq1  GCTCCCAGTAGAAGAGCTAGAGAAAATACCCAAGTAGCTGAAGGGGTCTG  950
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GCTCCCAGTAGAAGAGCTAGAGAAAATACCCAAGTAGCTGAA-GGGTCTG  949

seq1  CAACC  955
      |||||
seq2  CAACC  954

seq1: chr13_84199794_84200488
seq2: B6Ng01-116D12.g_70_764 (reverse)

seq1  ACCCCCACCCCTACCCCTACCAGGAACAAAGCTCCTGGAGAGATTTACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCACCCCTACCCCTACCAGGAACAAAGCTCCTGGAGAGATTTACAG  50

seq1  GGGGCTCCCCTCAGGCTGGACTACCTTCTTCTTTCAACCATACCAAGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTCCCCTCAGGCTGGACTACCTTCTTCTTTCAACCATACCAAGTCT  100

seq1  TCTCTGATTTATGGACCCTCTGTCCAACAGGACAGCCAGCTGACCTGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGATTTATGGACCCTCTGTCCAACAGGACAGCCAGCTGACCTGTTA  150

seq1  GCATCTCACTGGTCACTTTGAAGCAGCAACCTTAGGGATGAATATATTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTCACTGGTCACTTTGAAGCAGCAACCTTAGGGATGAATATATTCA  200

seq1  TTCTTTAGGGCAGATGAGGCCAAGAAGAAGAGGACAAGGTGTATGTCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTAGGGCAGATGAGGCCAAGAAGAAGAGGACAAGGTGTATGTCCAG  250

seq1  GCTGTGCCCTTAGTATCAGAAGCTTGTGCATATTTTTTCCTTTTCCCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGCCCTTAGTATCAGAAGCTTGTGCATATTTTTTCCTTTTCCCATA  300

seq1  AGTGTAAAAGCATGGCTTAAGGTCTTGGGTAGAATCTGTGAGCATGTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAAAAGCATGGCTTAAGGTCTTGGGTAGAATCTGTGAGCATGTCCA  350

seq1  GAGAACTGTCTTAGCTCTTCACATCTGAATCTCAAAGCTTTGAAAATAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACTGTCTTAGCTCTTCACATCTGAATCTCAAAGCTTTGAAAATAAG  400

seq1  GAAAAACACTACCAGTCCAAACCTCATATAAGTTCTGAGAGCAACAATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACACTACCAGTCCAAACCTCATATAAGTTCTGAGAGCAACAATGA  450

seq1  GAATGTACTAAGGGAAGTATGGCCAAATCAAGCGATCTAGTAGAAAAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTACTAAGGGAAGTATGGCCAAATCAAGCGATCTAGTAGAAAAGGG  500

seq1  TAGGGCCAATTTAAAAAATAAAGAAATCACAGAAGAGAGGGCAGAGCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCCAATTTAAAAAATAAAGAAATCACAGAAGAGAGGGCAGAGCAAA  550

seq1  GGCTGAGAGGCACCCGTCTCCATGAGTCTGCACAGAGAAACAGCAGCAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAGAGGCACCCGTCTCCATGAGTCTGCACAGAGAAACAGCAGCAGG  600

seq1  CAACCTGGCCCTTAACATTTGGGGAGAGGATTTCTGACTTCACGGTCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTGGCCCTTAACATTTGGGGAGAGGATTTCTGACTTCACGGTCCTC  650

seq1  AACTTTTTGTTGAAACACTAAAAGGTCCATAACATCTCTGAATTC  695
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTTGTTGAAACACTAAAAGGTCCATAACATCTCTGAATTC  695