BAC Information

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BAC

Clone NameB6Ng01-118I15
Chromosome13 (Build37)
Map Location 104,257,599 - 104,258,131
singlet/doubletsinglet
Overlap genenone
Upstream geneCd180, Mast4, EG621312, EG432800, LOC432801
Downstream geneLOC100040045, Ppia-ps13_1282.1, Sfrs12, Erbb2ip, LOC100040086, D130037M23Rik, Nln, Sgtb, 2410002O22Rik, LOC100040518, Trim23, Ppwd1, Cenpk, Adamts6, LOC667518
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118I15.g
ACCDH922992
length572
definitionDH922992|Mus musculus domesticus DNA, BAC clone: B6Ng01-118I15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttatgggtccaagcttatattttcttttttctttttcattcttt
ttattggttatttatttacatttcaaatgttatcccctttcctagtctct
cctacacaaatccccatcccctccccctgcttctatgaaggtgcttccac
acccacatacccacacacccactcccacctcagtgccctagcattcccct
atgatgggtcatcgagcctccataggaccaaggggctccccacctattga
tgtcagataaggccatcctctgctacatatgcatctggtgccataggtcc
ttccatgtgtactcctcagttagtggtttagtccctgggagctttggggg
gcggggggtaggtctgtttggttgatattgttgcaaaccccttcaactgc
ttcagttctcctaactcctccatttaggtcctcgtgttcagacccatggt
tggctgcaagcatctgcatctgtattggtcagcctctggcacagccacac
taggctcttgccagcaagcgcttcttggcatcaacaatagtgtccgggtt
tggtgtttgcgagaggaatgga
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_104257599_104258131
seq2: B6Ng01-118I15.g_66_598

seq1  GAATTCTTATGGGTCCAAGCTTATATTTTCTTTTTTCTTTTTCATTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATGGGTCCAAGCTTATATTTTCTTTTTTCTTTTTCATTCTTT  50

seq1  TTATTGGTTATTTATTTACATTTCAAATGTTATCCCCTTTCCTAGTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGGTTATTTATTTACATTTCAAATGTTATCCCCTTTCCTAGTCTCT  100

seq1  CCTACACAAATCCCCATCCCCTCCCCCTGCTTCTATGAAGGTGCTTCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACACAAATCCCCATCCCCTCCCCCTGCTTCTATGAAGGTGCTTCCAC  150

seq1  ACCCACATACCCACACACCCACTCCCACCTCAGTGCCCTAGCATTCCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACATACCCACACACCCACTCCCACCTCAGTGCCCTAGCATTCCCCT  200

seq1  ATGATGGGTCATCGAGCCTCCATAGGACCAAGGGGCTCCCCACCTATTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGGTCATCGAGCCTCCATAGGACCAAGGGGCTCCCCACCTATTGA  250

seq1  TGTCAGATAAGGCCATCCTCTGCTACATATGCATCTGGTGCCATAGGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGATAAGGCCATCCTCTGCTACATATGCATCTGGTGCCATAGGTCC  300

seq1  TTCCATGTGTACTCCTCAGTTAGTGGTTTAGTCCCTGGGAGCTTTGGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATGTGTACTCCTCAGTTAGTGGTTTAGTCCCTGGGAGCTTTGGGGG  350

seq1  GCGGGGGGTAGGTCTGTTTGGTTGATATTGTTGCAAACCCCTTCAGCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GCGGGGGGTAGGTCTGTTTGGTTGATATTGTTGCAAACCCCTTCAACTGC  400

seq1  TTCAGTTCTCCTAACTCCTCCATTTAGGTCCTCGTGTTCAGACCCATGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTCTCCTAACTCCTCCATTTAGGTCCTCGTGTTCAGACCCATGGT  450

seq1  TGGCTGCAAGCATCTGCATCTGTATTGGTCAGCCTCTGGCACAGCCACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCAAGCATCTGCATCTGTATTGGTCAGCCTCTGGCACAGCCACAC  500

seq1  TAGGCTCTTGCCAGCAAGCGCTTCTTGGCATCA  533
      |||||||||||||||||||||||||||||||||
seq2  TAGGCTCTTGCCAGCAAGCGCTTCTTGGCATCA  533