BAC Information

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BAC

Clone NameB6Ng01-119C01
Chromosome13 (Build37)
Map Location 37,042,137 - 37,043,251
singlet/doubletsinglet
Overlap geneF13a1
Upstream geneLOC100041568, Ppp1r3g, Lyrm4, LOC100042773, Fars2, LOC100041590, LOC666758, Nrn1
Downstream geneLy86, LOC100042794, LOC100042800, LOC100042802, LOC100041624, Rreb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119C01.bB6Ng01-119C01.g
ACCDH923423DH923424
length1,102836
definitionDH923423|Mus musculus domesticus DNA, BAC clone: B6Ng01-119C01, 5' end.DH923424|Mus musculus domesticus DNA, BAC clone: B6Ng01-119C01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatctaaccactggttcttcagaagtcagactgctgaaacaact
cagtgttacagtgattcatatcaaaagaggtgatattctctcaacatgat
atggacagaaagcctaagagtgtgacttcatgggagagactttagttggt
gccaatgctctgcatgaaaactgatggaaccctaaacaaaggagcagaat
gtagcacactaagaaaggtgacccctctcctcagctcatttcctttgctc
cgatcttggctcatccatgatccagtctctcggtgaactttagagcaaat
aaaataccaaaagaagaattgtgcataaataacataagaacagaagaaca
tgagacctagtaaatagggaggatggaagaaaaggcaatgctcacacata
gaagaaaactaaggagcacgaagcattttctcacaatctatgagatcgct
gacctaaaggacaaatggatgaccaaacaatatcatttcagaaacaaaga
tgcatcatcaactttgagatacagagttgacagtgttaaaagcaaataaa
cgacattgagagtgagttcgataatcaaaaaatattaatgaaaaaggcag
acattgttgcagagatgctaaaagctccagggcacagctgatacaacgca
aagataagtagtgtccttaaagtagagaaccctcaaaatgaaaccaaagt
tatgaccacaccctagagcctttggctttatcaagagagaattgactcta
cactgagagtcatccatagtctatggtttgacccaggcccctaacctaga
actcacaatccattgaaattttaaataaagaaaagattgcttggtcctct
agacaaaaatagagccactcagcaaaaatggagggaatcaggctgtcttc
ggatttctctccaataccattcagcgacacagtgtcaattcctattcaca
cagtcctgagagataggtgtctgaaagatgttaggcagagccaagctgca
cagaaaaaacaagcacataaatctcagtcatgagatctcagagaatgtac
gagtcataaagtcatcaaaataagtggagcatctcagaactttagctaca
aa
gaattccataatggtctttgtctgctgtaaggaaacgttaccttgatgag
ggatgaggactacacttccctctgggtataaggactaatatttaggctgt
cagatattatgctggcttagtacagtggtagttgtggattctcctccaag
atccatgacttcactagctttgtgtagttggctaggtttccagcaccagg
catgggctccctcttactgagtgtgttttaactgcatttggacagttgct
ggttattgtcaaggtattcatgtcaccactgtgttcttaacttgccatga
caaacttttctataggactcataggttttaaagagcagatagtggctcaa
tccttcatattgtttgtagttttgcaatgagatccagccatgtaaatttc
tttggttaattctgggtctgatgtggacagagaagctttggaccaaaatt
gagaatatgcaaacaactctttcacaagggcctcgtgtcagatatcctgc
atatctgatatttacattacaattcatcagtagcaacattacaggttgga
aatggcttaggtggaataaagtcagagacacaaaggactgggctggtggg
aaagatgtgtgttctggtccaagcatggagtaaagagggtagattcggga
gctgagaaggatgtgtggaagggagatcaggcaatctcacctggctagat
tcagaagaatatgcagtatcttcttaagtatggaggttggatgtgatgtg
ggaggggccttttgggctaggggtaggtagaatcctaaaagtagttgttg
ttccatttaagatagtcagactaaggaggcacttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_37042137_37043251
seq2: B6Ng01-119C01.b_46_1147

seq1  GAATTCAATCTAACCACTGGTTCTTCAGAAGTCAGACTGCTGAAACAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCTAACCACTGGTTCTTCAGAAGTCAGACTGCTGAAACAACT  50

seq1  CAGTGTTACAGTGATTCATATCAAAAGAGGTGATATTCTCTCAACATGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTTACAGTGATTCATATCAAAAGAGGTGATATTCTCTCAACATGAT  100

seq1  ATGGACAGAAAGCCTAAGAGTGTGACTTCATGGGAGAGACTTTAGTTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACAGAAAGCCTAAGAGTGTGACTTCATGGGAGAGACTTTAGTTGGT  150

seq1  GCCAATGCTCTGCATGAAAACTGATGGAACCCTAAACAAAGGAGCAGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATGCTCTGCATGAAAACTGATGGAACCCTAAACAAAGGAGCAGAAT  200

seq1  GTAGCACACTAAGAAAGGTGACCCCTCTCCTCAGCTCATTTCCTTTGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCACACTAAGAAAGGTGACCCCTCTCCTCAGCTCATTTCCTTTGCTC  250

seq1  CGATCTTGGCTCATCCATGATCCAGTCTCTCGGTGAACTTTAGAGCAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCTTGGCTCATCCATGATCCAGTCTCTCGGTGAACTTTAGAGCAAAT  300

seq1  AAAATACCAAAAGAAGAATTGTGCATAAATAACATAAGAACAGAAGAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACCAAAAGAAGAATTGTGCATAAATAACATAAGAACAGAAGAACA  350

seq1  TGAGACCTAGTAAATAGGGAGGATGGAAGAAAAGGCAATGCTCACACATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACCTAGTAAATAGGGAGGATGGAAGAAAAGGCAATGCTCACACATA  400

seq1  GAAGAAAACTAAGGAGCACGAAGCATTTTCTCACAATCTATGAGATCGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAACTAAGGAGCACGAAGCATTTTCTCACAATCTATGAGATCGCT  450

seq1  GACCTAAAGGACAAATGGATGACCAAACAATATCATTTCAGAAACAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTAAAGGACAAATGGATGACCAAACAATATCATTTCAGAAACAAAGA  500

seq1  TGCATCATCAACTTTGAGATACAGAGTTGACAGTGTTAAAAGCAAATAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCATCAACTTTGAGATACAGAGTTGACAGTGTTAAAAGCAAATAAA  550

seq1  CGACATTGAGAGTGAGTTCGATAATCAAAAAATATTAATGAAAAAGGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACATTGAGAGTGAGTTCGATAATCAAAAAATATTAATGAAAAAGGCAG  600

seq1  ACATTGTTGCAGAGATGCTAAAAGCTCCAGGGCACAGCTGATACAACGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTTGCAGAGATGCTAAAAGCTCCAGGGCACAGCTGATACAACGCA  650

seq1  AAGATAAGTAGTGTCCTTAAAGTAGAGAACCCTCAAAATGAAACCAAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAAGTAGTGTCCTTAAAGTAGAGAACCCTCAAAATGAAACCAAAGT  700

seq1  TATGACCACACCCTAGAGCCTTTGGCTTTATCAAGAGAGAATTGACTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACCACACCCTAGAGCCTTTGGCTTTATCAAGAGAGAATTGACTCTA  750

seq1  CACTGAGAGTCATCCATAGTCTATGGTTTGACCCAGGCCCCTAACCTAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGAGTCATCCATAGTCTATGGTTTGACCCAGGCCCCTAACCTAGA  800

seq1  ACTCACAATCCATTGAAATTTTAAATAAAGAAAAGATTGCTTGGTCCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACAATCCATTGAAATTTTAAATAAAGAAAAGATTGCTTGGTCCTCT  850

seq1  AGACAAAAATAGAGCCACTCAGCAAAAATGGAGGGAATCAGGCTGTCTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAAATAGAGCCACTCAGCAAAAATGGAGGGAATCAGGCTGTCTTC  900

seq1  GGATTTCTCTCCAATACCATTCAGCGACAACAGTGTCAATTCCTATTCAC  950
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GGATTTCTCTCCAATACCATTCAGCGAC-ACAGTGTCAATTCCTATTCAC  949

seq1  ACAGTCCTGAGAGATAGGTGTCTGAAAGATGTTAGGCAGAGCCAAGCTGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCCTGAGAGATAGGTGTCTGAAAGATGTTAGGCAGAGCCAAGCTGC  999

seq1  ACAAGAAAAAAACCAAGCAACATTAAATCTCAGTCATGAAGGATCTCAGA  1050
      || ||||||||  ||||| ||| ||||||||||||||||  |||||||||
seq2  AC-AGAAAAAA--CAAGC-ACA-TAAATCTCAGTCATGA--GATCTCAGA  1042

seq1  GAATGTACGAGTCATAAAGTCCATCAAAAATAAAGTTGAGCATCCTTCAG  1100
      |||||||||||||||||||| ||||||||   |||| |||||||  ||||
seq2  GAATGTACGAGTCATAAAGT-CATCAAAA--TAAGTGGAGCATC--TCAG  1087

seq1  AACTATAGCTACAAA  1115
      |||| ||||||||||
seq2  AACTTTAGCTACAAA  1102