BAC Information

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BAC

Clone NameB6Ng01-121K17
Chromosome13 (Build37)
Map Location 68,963,169 - 69,105,555
singlet/doubletdoublet
Overlap geneAdcy2, LOC666205
Upstream geneBC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272, LOC100042223, Mtrr, LOC100042233, Fastkd3, 1700001L19Rik
Downstream geneLOC218332, Pols, A530095I07Rik, Srd5a1, Nsun2, LOC100042260, 3110006E14Rik, 4930547H16Rik, Med10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121K17.bB6Ng01-121K17.g
ACCDH925296DH925297
length245923
definitionDH925296|Mus musculus domesticus DNA, BAC clone: B6Ng01-121K17, 5' end.DH925297|Mus musculus domesticus DNA, BAC clone: B6Ng01-121K17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,963,169 - 68,963,413)(69,104,941 - 69,105,555)
sequence
actctgtagaccaggctggcctttactcagaaatccacctgcctctgcct
cccaagtgctgggattaaaggtgtgcaccaacagtgcctgtagggatttt
ttttttctattccaacagacatgtgggaactaaggtcatgacaaaatcct
cttttccaatttcactccacttttttcttaaaagccaaattcagaattac
agaacctcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattctatggtaatcaaattagaatggatctatatcttcaaaaataatt
gggaaaaataataaaataatttgaatagaagtttaagatattttcattta
aaaaaggttccaaaacaaatggcttctctggtgagtttacacaactattt
aagaaaaataattacaatattaaaggttctacagaatagtaaatgtagca
tttaccaacctatgtcatgaaaccattgtttttctgatatccaatccaat
gacattccatggaaacaatactatatactgtacttttcatgaatatggac
agaaaaattctagactaaatctattcaattttattatttatatacacata
tgtacatatgtatgtataaagacagagaggaaaatattattatatatgcc
aaagatataaatgatgtgtcctaagcatgcaaagttggttggtttaatac
tgaaagaccacattaagcatcatttcagtagagttacatcatcagtcttt
catcaggtgctgaagagtcatttgaagaaaatcaccacttgtttatgtta
aattacaagtctcctagtaatctggaataagaactttcttgaactggtga
aagacattataaactacagggtcatgctaagcagtgaactactgagtaaa
atccctgccaccaggaacacatgaggatggtctttcccgtctctgccctt
cagtgacttacagagcatcctgagtagggaaaagaacaagaaaggactca
agaatatgcagattagaaagagctaagggaaccttcatggtagcatggcc
atcatccctgactactgagtacttcagatgtgtctaaagttgggagaggg
accccatccagtgtcaacgatgacctgtggagaagtgtctcatgaaaaga
atggtaactgctgcaatgacaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_68963169_68963413
seq2: B6Ng01-121K17.b_57_301

seq1  ACTCTGTAGACCAGGCTGGCCTTTACTCAGAAATCCACCTGCCTCTGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTAGACCAGGCTGGCCTTTACTCAGAAATCCACCTGCCTCTGCCT  50

seq1  CCCAAGTGCTGGGATTAAAGGTGTGCACCAACAGTGCCTGTAGGGATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGTGCTGGGATTAAAGGTGTGCACCAACAGTGCCTGTAGGGATTTT  100

seq1  TTTTTTCTATTCCAACAGACATGTGGGAACTAAGGTCATGACAAAATCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTATTCCAACAGACATGTGGGAACTAAGGTCATGACAAAATCCT  150

seq1  CTTTTCCAATTTCACTCCACTTTTTTCTTAAAAGCCAAATTCAGAATTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCAATTTCACTCCACTTTTTTCTTAAAAGCCAAATTCAGAATTAC  200

seq1  AGAACCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  245
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  245

seq1: chr13_69104941_69105555
seq2: B6Ng01-121K17.g_66_680 (reverse)

seq1  AGTTTATAATGTCTTTCACCAGTTCAAGAAAGTTCTTATTCCAGATTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATAATGTCTTTCACCAGTTCAAGAAAGTTCTTATTCCAGATTACT  50

seq1  AGGAGACTTGTAATTTAACATAAACAAGTGGTGATTTTCTTCAAATGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGACTTGTAATTTAACATAAACAAGTGGTGATTTTCTTCAAATGACT  100

seq1  CTTCAGCACCTGATGAAAGACTGATGATGTAACTCTACTGAAATGATGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGCACCTGATGAAAGACTGATGATGTAACTCTACTGAAATGATGCT  150

seq1  TAATGTGGTCTTTCAGTATTAAACCAACCAACTTTGCATGCTTAGGACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTGGTCTTTCAGTATTAAACCAACCAACTTTGCATGCTTAGGACAC  200

seq1  ATCATTTATATCTTTGGCATATATAATAATATTTTCCTCTCTGTCTTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTATATCTTTGGCATATATAATAATATTTTCCTCTCTGTCTTTAT  250

seq1  ACATACATATGTACATATGTGTATATAAATAATAAAATTGAATAGATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATATGTACATATGTGTATATAAATAATAAAATTGAATAGATTTA  300

seq1  GTCTAGAATTTTTCTGTCCATATTCATGAAAAGTACAGTATATAGTATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGAATTTTTCTGTCCATATTCATGAAAAGTACAGTATATAGTATTG  350

seq1  TTTCCATGGAATGTCATTGGATTGGATATCAGAAAAACAATGGTTTCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATGGAATGTCATTGGATTGGATATCAGAAAAACAATGGTTTCATG  400

seq1  ACATAGGTTGGTAAATGCTACATTTACTATTCTGTAGAACCTTTAATATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGGTTGGTAAATGCTACATTTACTATTCTGTAGAACCTTTAATATT  450

seq1  GTAATTATTTTTCTTAAATAGTTGTGTAAACTCACCAGAGAAGCCATTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTATTTTTCTTAAATAGTTGTGTAAACTCACCAGAGAAGCCATTTG  500

seq1  TTTTGGAACCTTTTTTAAATGAAAATATCTTAAACTTCTATTCAAATTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGAACCTTTTTTAAATGAAAATATCTTAAACTTCTATTCAAATTAT  550

seq1  TTTATTATTTTTCCCAATTATTTTTGAAGATATAGATCCATTCTAATTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATTTTTCCCAATTATTTTTGAAGATATAGATCCATTCTAATTTG  600

seq1  ATTACCATAGAATTC  615
      |||||||||||||||
seq2  ATTACCATAGAATTC  615