BAC Information

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BAC

Clone NameB6Ng01-122P20
Chromosome13 (Build37)
Map Location 6,691,936 - 6,692,668
singlet/doubletsinglet
Overlap genenone
Upstream gene1700016G22Rik, Klf6, LOC100039388, LOC100039395, Pitrm1, Pfkp, LOC100039532
Downstream geneLOC667611, EG623516
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122P20.bB6Ng01-122P20.g
ACCDH926276DH926277
length1,243936
definitionDH926276|Mus musculus domesticus DNA, BAC clone: B6Ng01-122P20, 5' end.DH926277|Mus musculus domesticus DNA, BAC clone: B6Ng01-122P20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaagcaggaactgaagagatcatgagggaaagctgctgctgact
atcacgtcatggctgacttatacaactgagaaccaactgcttacagggtg
cactactgtagtgggccgagcacctcccatatcaatcattaatcaagaaa
atgtctttgcaatgccaaaatggacagggaaaaccctacaagtcttcaat
cctacacaaagaactacaggcaactgacaaaagctaggagctcaagactc
ggtcttcctcaaggaagagcatgccagttggttgtctagtgctgaaggat
cagccttgacaacatatatacaagtaatattacatggacttaataggtag
tactgaggaatacaatgtgaatatgtgtggggagccgccctcacattcgc
tgttgcaagatggcactgacatcctgtgttctaagtggtaaacaaataat
ctgcgcatgtgccaagggtagttctccaccccatgtgctctgccttcccc
gtgatgacaactcggccgatgggctgcagccaatcagggagtgacacgtc
ctaggcggaggataattctccttaaaagggacggggtttcaccattcgct
ctcttgcgctctggctcctaaagatgtaagcaatagagctcttgctctct
tgcttgctctctggctcctgaagatgtaagcaataaagctttgccgcaga
agattccggtttgttgcatctttcctggccggtcgcgaacgcgtgtaaga
aatatgtatacatatatgctcacaataagaagtgagagggctatataaga
gggtttggagggaagaaagagaaagggataaatgctgtaatcaaaatata
atcttagaaattaagatattaaagaaaatgtctcacacagaaaccctcat
gataatctggtaagaacaattcctcagtgagtttcctctttccaaatgac
tacagttgtgtcaagtttacaaagctaaccagtatacctgctgccaggga
cagagtagatagtctgaaacctgaacagtgacccctactgaaatttgtgg
agttaatggattattctctgactaatcctggaagaaagcctccacactgg
tgaagaacccaggaccatcatgcagctgcaggaacaattcacacttagca
acatcttgtcaattcctgatttcggctgaaaattaaaccctattcttagc
tatggttaagggaaggacacacccgaaaattgagtaagcacat
gaattcagtctcctcctggctgcctttggattaaaatgtagaactctcag
ctccttctcctgaatcatatcttcctgcaggctgccgtgcttccttctat
aatgataatggactgaacctctgaaactgcacaccaaccccaattaaatg
tttttttaagagttgccttggtcgtagcgtctcttcacagaaatggaaac
cctaactaagataaacacataccaataacctacacttgtggttttccctt
gtccttagcggttgttggccacaggcccatggggacaaaggaggcagaag
catctagcagggttaggacagctgtgagtatgatagaagaacttacagag
aatgctgcagtgagacaaacctactttattgttccagggatataagggcc
tttaggggtatgtagggttaaatggtatctcgagtcccctctgccatagg
gcttgggccacttggggagaaggaatgctaaaagttttgactgtgcttac
cccatgcaagggctgggaagctgtgggactccactcaagggttggggaag
tgcagtataaggtcccagggacagctgtagctggtttgggggtccttggg
catggagggaagccaggcccatctggttctcagactgttggcacccaggt
gccgctggatactgaggaggagctgagaatggagtgggggcccatggact
ggatcaagcctggggccaaaggggaaaaaagggagagctctggctgggtc
atttgggtaggagagagtccttggcttgttgggcaggcattcttgacttg
gtggaagccatggctgggagggtacggtggactctagatgaaggcctgct
tcaatgctccccatggcagatcccatgaaaaagagcagtccaaggtttta
agacattttatgtcatggtgggagtagatgaataaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_6691936_6692668
seq2: B6Ng01-122P20.g_70_802

seq1  GAATTCAGTCTCCTCCTGGCTGCCTTTGGATTAAAATGTAGAACTCTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCTCCTCCTGGCTGCCTTTGGATTAAAATGTAGAACTCTCAG  50

seq1  CTCCTTCTCCTGAATCATATCTTCCTGCAGGCTGCCGTGCTTCCTTCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCTCCTGAATCATATCTTCCTGCAGGCTGCCGTGCTTCCTTCTAT  100

seq1  AATGATAATGGACTGAACCTCTGAAACTGCACACCAACCCCAATTAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATAATGGACTGAACCTCTGAAACTGCACACCAACCCCAATTAAATG  150

seq1  TTTTTTTAAGAGTTGCCTTGGTCGTAGCGTCTCTTCACAGAAATGGAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAAGAGTTGCCTTGGTCGTAGCGTCTCTTCACAGAAATGGAAAC  200

seq1  CCTAACTAAGATAAACACATACCAATAACCTACACTTGTGGTTTTCCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACTAAGATAAACACATACCAATAACCTACACTTGTGGTTTTCCCTT  250

seq1  GTCCTTAGCGGTTGTTGGCCACAGGCCCATGGGGACAAAGGAGGCAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTAGCGGTTGTTGGCCACAGGCCCATGGGGACAAAGGAGGCAGAAG  300

seq1  CATCTAGCAGGGTTAGGACAGCTGTGAGTATGATAGAAGAACTTACAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAGCAGGGTTAGGACAGCTGTGAGTATGATAGAAGAACTTACAGAG  350

seq1  AATGCTGCAGTGAGACAAACCTACTTTATTGTTCCAGGGATATAAGGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGCAGTGAGACAAACCTACTTTATTGTTCCAGGGATATAAGGGCC  400

seq1  TTTAGGGGTATGTAGGGTTAAATGGTATCTCGAGTCCCCTCTGCCATAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGGGTATGTAGGGTTAAATGGTATCTCGAGTCCCCTCTGCCATAGG  450

seq1  GCTTGGGCCACTTGGGGAGAAGGAATGCTAAAAGTTTTGACTGTGCTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGGCCACTTGGGGAGAAGGAATGCTAAAAGTTTTGACTGTGCTTAC  500

seq1  CCCATGCAAGGGCTGGGAAGCTGTGGGACTCCACTCAAGGGTTGGGGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGCAAGGGCTGGGAAGCTGTGGGACTCCACTCAAGGGTTGGGGAAG  550

seq1  TGCAGTATAAGGTCCCAGGGACAGCTGTAGCTGGTTTGGGGGTCCTTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTATAAGGTCCCAGGGACAGCTGTAGCTGGTTTGGGGGTCCTTGGG  600

seq1  CATGGAGGGAAGCCAGGCCCATCTGGTTCTCAGACTGTTGGCACCCAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGGGAAGCCAGGCCCATCTGGTTCTCAGACTGTTGGCACCCAGGT  650

seq1  GCCGCTGGATACTGAGGAGGAGCTGAGAATGGAGTGGGGGCCCATGGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCTGGATACTGAGGAGGAGCTGAGAATGGAGTGGGGGCCCATGGACT  700

seq1  GGATCAAGCCTGGGGCCAAAGGGGAAAAAAGGG  733
      |||||||||||||||||||||||||||||||||
seq2  GGATCAAGCCTGGGGCCAAAGGGGAAAAAAGGG  733