BAC Information

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BAC

Clone NameB6Ng01-123D19
Chromosome13 (Build37)
Map Location 79,361,491 - 79,362,614
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC268676, LOC100042683, LOC622365, LOC100043052, EG666883
Downstream geneLOC666925, LOC382780, EG666933
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123D19.bB6Ng01-123D19.g
ACCDH926458DH926459
length1,120371
definitionDH926458|Mus musculus domesticus DNA, BAC clone: B6Ng01-123D19, 5' end.DH926459|Mus musculus domesticus DNA, BAC clone: B6Ng01-123D19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcataggatggacataggccctatgtacatatgtaatagttgtgta
actggatcttcatgtgggactcctaaaacagaaactgtgtcactctctga
ctacactacctgcctttgggtccctttccctaactgggctgccttgccta
ttcccaatagaagaagatggttggagtcttactacaacttagtgggaaaa
atctgctttaagtgatcaactgaaacttactaaaaatcatgcaaactaaa
atctatcaaactgttcaaacccaacataattacataaaaattccaaaggc
atatgctaagaaaaagaagtaaagtcgatcttaaattacaaaaatattaa
caaccttacataaaaagaaatgtgttctacagcagctcatgtctcttttg
tgtaacagaaaagacagttgcatttttaaaatcttgtacagattccaaat
atttaccgatcagaacattttatttttccatatttagtaattctaagtac
tatgtccatccagaggttactgctttttttttttccatatggttaccatg
attctctaagagcttctcacataggttatgaaaccatttttcgactttca
attttaagtatagtatccagtaaatggtgttgtcatacaagaactataaa
ggctgctggtagaatgaattacccaaacgttttaaaaacgttctttcatt
cataaaagaaatgttttgagttgaagagaggagttagtgactgacgcgca
cacactatagacaggttgtaagttttatgcatcagaagagacagaacccc
aactctaatttcatgaagtgggagattctataaatagtcaataaatggtc
aacatagccaggggatgtaatttgtaatactggtcgacaaggctcagaaa
agttatccagtgcacgcaacttcatttgtgcatataccattgcatcagaa
ctgaaataacctggaattcattctcccctgagttttgtgcacctagacac
gcatgatatttctaaacattacagcacatcttatttcaaggagaatcagg
aagagactagaaatagagctccgaaatagtattccctaatgttcagattt
tgactttacataggttcttt

tcacaaaaaagggatctaccatgactgccctcaaaaagacgcaacaagca
gctgaaagtcagatgcagttactcgcacccaaccaatggacagaagcagc
tgacccctgtttgttgaattagggaaggctgaaaaaaattgtggagaaga
gcaattctgtaggagaaccagcagtcttaattaatctggaccccgagatc
tttcaaacactggaccaccaaacagagagcatgcaccagcttatatgatg
cccctaacacacatagagtagaggacttccagatctgtgttcattcagag
atgaagtacctaaccctaaagagactggaggccccagggagtttagatgt
caggtggggtgggggttgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_79361491_79362614
seq2: B6Ng01-123D19.b_49_1168

seq1  GAATTCATAGGATGGACATAGGCCCTATGTACATATGTAATAGTTGTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGGATGGACATAGGCCCTATGTACATATGTAATAGTTGTGTA  50

seq1  ACTGGATCTTCATGTGGGACTCCTAAAACAGAAACTGTGTCACTCTCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGATCTTCATGTGGGACTCCTAAAACAGAAACTGTGTCACTCTCTGA  100

seq1  CTACACTACCTGCCTTTGGGTCCCTTTCCCTAACTGGGCTGCCTTGCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACTACCTGCCTTTGGGTCCCTTTCCCTAACTGGGCTGCCTTGCCTA  150

seq1  TTCCCAATAGAAGAAGATGGTTGGAGTCTTACTACAACTTAGTGGGAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAATAGAAGAAGATGGTTGGAGTCTTACTACAACTTAGTGGGAAAA  200

seq1  ATCTGCTTTAAGTGATCAACTGAAACTTACTAAAAATCATGCAAACTAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCTTTAAGTGATCAACTGAAACTTACTAAAAATCATGCAAACTAAA  250

seq1  ATCTATCAAACTGTTCAAACCCAACATAATTACATAAAAATTCCAAAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCAAACTGTTCAAACCCAACATAATTACATAAAAATTCCAAAGGC  300

seq1  ATATGCTAAGAAAAAGAAGTAAAGTCGATCTTAAATTACAAAAATATTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCTAAGAAAAAGAAGTAAAGTCGATCTTAAATTACAAAAATATTAA  350

seq1  CAACCTTACATAAAAAGAAATGTGTTCTACAGCAGCTCATGTCTCTTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTTACATAAAAAGAAATGTGTTCTACAGCAGCTCATGTCTCTTTTG  400

seq1  TGTAACAGAAAAGACAGTTGCATTTTTAAAATCTTGTACAGATTCCAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACAGAAAAGACAGTTGCATTTTTAAAATCTTGTACAGATTCCAAAT  450

seq1  ATTTACCGATCAGAACATTTTATTTTTCCATATTTAGTAATTCTAAGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACCGATCAGAACATTTTATTTTTCCATATTTAGTAATTCTAAGTAC  500

seq1  TATGTCCATCCAGAGGTTACTGCTTTTTTTTTTTCCATATGGTTACCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCCATCCAGAGGTTACTGCTTTTTTTTTTTCCATATGGTTACCATG  550

seq1  ATTCTCTAAGAGCTTCTCACATAGGTTATGAAACCATTTTTCGACTTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTAAGAGCTTCTCACATAGGTTATGAAACCATTTTTCGACTTTCA  600

seq1  ATTTTAAGTATAGTATCCAGTAAATGGTGTTGTCATACAAGAACTATAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAGTATAGTATCCAGTAAATGGTGTTGTCATACAAGAACTATAAA  650

seq1  GGCTGCTGGTAGAATGAATTACCCAAACGTTTTAAAAACGTTCTTTCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCTGGTAGAATGAATTACCCAAACGTTTTAAAAACGTTCTTTCATT  700

seq1  CATAAAAGAAATGTTTTGAGTTGAAGAGAGGAGTTAGTGACTGACGCGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAAGAAATGTTTTGAGTTGAAGAGAGGAGTTAGTGACTGACGCGCA  750

seq1  CACACTATAGACAGGTTGTAAGTTTTATGCATCAGAAGAGACAGAACCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTATAGACAGGTTGTAAGTTTTATGCATCAGAAGAGACAGAACCCC  800

seq1  AACTCTAATTTCATGAAGTGGGAGATTCTATAAATAGTCAATAAATGGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTAATTTCATGAAGTGGGAGATTCTATAAATAGTCAATAAATGGTC  850

seq1  AACATAGCCAGGGGATGTAATTTGTAATACTGGTCGACAAGGCTCAGAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAGCCAGGGGATGTAATTTGTAATACTGGTCGACAAGGCTCAGAAA  900

seq1  AGTTATCCAGTGCACGCAACTTCATTTGTGCATATACCATTGCATCAGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATCCAGTGCACGCAACTTCATTTGTGCATATACCATTGCATCAGAA  950

seq1  CTGAAATAACCTGGAATTCATTCTCCCCTGAGTTTTGTGCACCTAGACAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATAACCTGGAATTCATTCTCCCCTGAGTTTTGTGCACCTAGACAC  1000

seq1  GCATGATA-TTCTAAACATTACAGCACATCTTATTTCAGGGAAAATTCAG  1049
      |||||||| ||||||||||||||||||||||||||||| ||| || ||| 
seq2  GCATGATATTTCTAAACATTACAGCACATCTTATTTCAAGGAGAA-TCA-  1048

seq1  GGAAGAGACTTAGAATAGAGCTCCAGAAATAAGTATTTCCCTATGTCAGG  1099
      ||||||||||   ||||||||||| ||||| |||||| ||  ||||   |
seq2  GGAAGAGACTAGAAATAGAGCTCC-GAAAT-AGTATTCCCTAATGTTCAG  1096

seq1  ATTTTGACTTTTACATTAGTTCTTT  1124
      |||||||| |||||||  |||||||
seq2  ATTTTGAC-TTTACATAGGTTCTTT  1120


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