BAC Information

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BAC

Clone NameB6Ng01-124A10
Chromosome13 (Build37)13 (Build37)
Map Location 12,872,942 - 12,873,87113,179,135 - 13,179,839
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneRyr2, LOC100039678, Mtr, LOC100039826, Actn2, EG432725, Heatr1, LOC546246, Lgals8, LOC100039900, Edaradd, Ero1lb, LOC664862, EG238507, LOC100039744, EG630757
Downstream genePrl2c3, LOC100039999, LOC100039754, Prl2c2, LOC434483, LOC674723, Prl2c5, LOC630611, LOC100039786, LOC385049, LOC630663, LOC100040108, Gpr137b, LOC664960, Nid1, Lyst
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124A10.bB6Ng01-124A10.g
ACCDH927039DH927040
length999954
definitionDH927039|Mus musculus domesticus DNA, BAC clone: B6Ng01-124A10, 5' end.DH927040|Mus musculus domesticus DNA, BAC clone: B6Ng01-124A10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(12,872,942 - 12,873,871)(13,179,135 - 13,179,839)
sequence
gaattcacttataatgcaaacatttactgtcttacattggaaaagcagct
aaagaaattgtaattatatctgttgtaaacttgaaagtaggtagttaaaa
tagacaacactaaaacctatgagagttttgaaaaagtcttaggccagctt
gattagatattgcctcattctatacacttattttcattactgatgcacac
cataaataaaatgtaagagtttatttagaagatatataattttcattcta
caagatatggagaattcatgctgggactaattataattttctatggttct
aatcagttttatagttctagataccaatatattggtaaatggtttgaagc
atcagggtaaacctgtttagccaaagataattcaatatgaagtcaagcaa
gatttaatcacaagtccaattgtggcacaaacctttctgtttaattggat
attttctttatttacatttcaaatgtttttccctttccaggtatccactc
agaagcctcttatcccatcacccctcctcctgcatctatgggggtgctca
ctcactcagctacccactccagtcttcctgccctggcattcccctattct
ggggcatccaacaccctcaggctcaaggacctctcctcccactgatgtcc
aacaaggccctcctctggtaaatatgtttccagagccatgggtatctcca
tgtttacactttggtgggtggtacagtcctcagaaactgcaggaagtctg
gctggttgacactgttgctctctccatggggctgcaaaccccctcagctt
cttcagtcccttctccaactcctccactggggactccacactcagacaaa
tggttggctgtaggcatccacttctgtatttgtcagctctagtagtgcct
ctcagagacagccatgtcagatttctgtcagcaagcacttctcagcatcc
acaatggtatccaggttttttgaatatatatgggactactaatatccac
gaattctgttctgacctttggactttgggacttttttttccagttgagag
atatttaattatttaaaaattaagtaattaaatatttctttttcacttaa
tgttatattttcaattattaacttcaactggatttggattttaataggtt
gtgcatatggaaaattttatctatgcttgtttttattttctttggttttt
gttttaatttcagtatattttaaccttagtttcctcaccctccactcgcc
acagcaactcctccactctcccaaaggccctctcctcttccatctatctt
tagaaaaaaaaagcaggcacttgaagggtttcagccaaacatggcataaa
aagttacaacaagacatgatataaaccctcacatcaaggcagggcaaggc
agcatagtaagaggaaaatgatccccagaggagacaatataacatcagat
acgctcacattcccactgttaagagtccaatagaaatacaaagctaataa
ccctaacatagagagagaatatctagagcaaacccatgcatactctgtga
tagttgcttcagtctctgtgagccactatgaacactgctacactggtttt
gttagctgttttctcctggtgttaatttggttagatataactttaaagta
tgtgtctataattctctgaatgtccttaatgcttgctttactctctcctt
ttcatctctaattttattaatttgcaatctcactaattttttggtcaaat
gtgctaatggtttttcaatgttattaaacttttcaaaacacctgagatat
atattatatatatagcaatcaacttgtttttgttccttttgttcgtttgc
ttttactttttattggatattttctttatttatatttcaaattttatcct
ctttcccagtttcccccactcccgaaaataccctagcccattcgctcccc
ccgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_12872942_12873871
seq2: B6Ng01-124A10.b_47_974

seq1  GAATTCACTTATAATGCAAACATTTACTGTCTTACATTGGAAAAGCAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTATAATGCAAACATTTACTGTCTTACATTGGAAAAGCAGCT  50

seq1  AAAGAAATTGTAATTATATCTGTTGTAAACTTGAAAGTAGGTAGTTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATTGTAATTATATCTGTTGTAAACTTGAAAGTAGGTAGTTAAAA  100

seq1  TAGACAACACTAAAACCTATGAGAGTTTTGAAAAAGTCTTAGGCCAGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAACACTAAAACCTATGAGAGTTTTGAAAAAGTCTTAGGCCAGCTT  150

seq1  GATTAGATATTGCCTCATTCTATACACTTATTTTCATTACTGATGCACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGATATTGCCTCATTCTATACACTTATTTTCATTACTGATGCACAC  200

seq1  CATAAATAAAATGTAAGAGTTTATTTAGAAGATATATAATTTTCATTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATAAAATGTAAGAGTTTATTTAGAAGATATATAATTTTCATTCTA  250

seq1  CAAGATATGGAGAATTCATGCTGGGACTAATTATAATTTTCTATGGTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATATGGAGAATTCATGCTGGGACTAATTATAATTTTCTATGGTTCT  300

seq1  AATCAGTTTTATAGTTCTAGATACCAATATATTGGTAAATGGTTTGAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGTTTTATAGTTCTAGATACCAATATATTGGTAAATGGTTTGAAGC  350

seq1  ATCAGGGTAAACCTGTTTAGCCAAAGATAATTCAATATGAAGTCAAGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGGTAAACCTGTTTAGCCAAAGATAATTCAATATGAAGTCAAGCAA  400

seq1  GATTTAATCACAAGTCCAATTGTGGCACAAACCTTTCTGTTTAATTGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAATCACAAGTCCAATTGTGGCACAAACCTTTCTGTTTAATTGGAT  450

seq1  ATTTTCTTTATTTACATTTCAAATGTTTTTCCCTTTCCAGGTATCCACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTTATTTACATTTCAAATGTTTTTCCCTTTCCAGGTATCCACTC  500

seq1  AGAAGCCTCTTATCCCATCACCCCTCCTCCTGCATCTATGGGGGTGCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCTCTTATCCCATCACCCCTCCTCCTGCATCTATGGGGGTGCTCA  550

seq1  CTCACTCAGCTACCCACTCCAGTCTTCCTGCCCTGGCATTCCCCTATTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTCAGCTACCCACTCCAGTCTTCCTGCCCTGGCATTCCCCTATTCT  600

seq1  GGGGCATCCAACACCCTCAGGCTCAAGGACCTCTCCTCCCACTGATGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCATCCAACACCCTCAGGCTCAAGGACCTCTCCTCCCACTGATGTCC  650

seq1  AACAAGGCCCTCCTCTGGTAAATATGTTTCCAGAGCCATGGGTATCTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGGCCCTCCTCTGGTAAATATGTTTCCAGAGCCATGGGTATCTCCA  700

seq1  TGTTTACACTTTGGTGGGTGGTACAGTCCTCAGAAACTGCAGGAAGTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACACTTTGGTGGGTGGTACAGTCCTCAGAAACTGCAGGAAGTCTG  750

seq1  GCTGGTTGACACTGTTGCTCTCTCCATGGGGCTGCAAACCCCCTCAGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTTGACACTGTTGCTCTCTCCATGGGGCTGCAAACCCCCTCAGCTT  800

seq1  CTTCAGTCCCTTCTCCAACTCCTCCACTGGGGACTCCACACTCAGACAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTCCCTTCTCCAACTCCTCCACTGGGGACTCCACACTCAGACAAA  850

seq1  TGGTTGGCTGTAGGCATCCACTTCTGTATTTGTCAGGCTCTAGTAGTGCC  900
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGGTTGGCTGTAGGCATCCACTTCTGTATTTGTCA-GCTCTAGTAGTGCC  899

seq1  TCTCAGGAGACAGCCATGTCAGATTTCTGT  930
      ||||| ||||||||||||||||||||||||
seq2  TCTCA-GAGACAGCCATGTCAGATTTCTGT  928

seq1: chr13_13179135_13179839
seq2: B6Ng01-124A10.g_70_776

seq1  GAATTCTGTCCTGACCTTTGGATTTTGGGACTTTTTTTTCCAGTTGAGAG  50
      ||||||||| |||||||||||| |||||||||||||||||||||||||||
seq2  GAATTCTGTTCTGACCTTTGGACTTTGGGACTTTTTTTTCCAGTTGAGAG  50

seq1  GTATATAATTACTTAAAAATTAAGTAATTAAATATTTCTTTCTCGCTTAA  100
       ||| |||||| ||||||||||||||||||||||||||||| || |||||
seq2  ATATTTAATTATTTAAAAATTAAGTAATTAAATATTTCTTTTTCACTTAA  100

seq1  TGTTATATTTTCAATTATTAACTTCAACTGGATTTGGATTTTAATAGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATATTTTCAATTATTAACTTCAACTGGATTTGGATTTTAATAGGTT  150

seq1  GTGCATATGGAAAATTTTATCTATGCTTGTTTTTATTTTCTTTGGGTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTGCATATGGAAAATTTTATCTATGCTTGTTTTTATTTTCTTTGGTTTTT  200

seq1  GTTTTAATTTCAGTATATTCCAACCTTAGTTTCCTCACCCTCCACTCGCC  250
      |||||||||||||||||||  |||||||||||||||||||||||||||||
seq2  GTTTTAATTTCAGTATATTTTAACCTTAGTTTCCTCACCCTCCACTCGCC  250

seq1  ACAGCAACCCCTTCACTCTCCCAAAGGCCCTCTCCTCTTCCATCTATCTT  300
      |||||||| ||| |||||||||||||||||||||||||||||||||||||
seq2  ACAGCAACTCCTCCACTCTCCCAAAGGCCCTCTCCTCTTCCATCTATCTT  300

seq1  TAG-AAAAAAAAGCAGGCACTTGAAGGATATCAGTCAAACATGGCATAAA  349
      ||| ||||||||||||||||||||||| | |||| |||||||||||||||
seq2  TAGAAAAAAAAAGCAGGCACTTGAAGGGTTTCAGCCAAACATGGCATAAA  350

seq1  AAGTTACAACCAGACTAGATACAAACCCTCACATCAAGG-TGGGCAAGGC  398
      |||||||||| ||||  |||| |||||||||||||||||  |||||||||
seq2  AAGTTACAACAAGACATGATATAAACCCTCACATCAAGGCAGGGCAAGGC  400

seq1  AGCATAGTAAGAGGAAAATGATCCCCAGAGGAGACAATATAACATCAGAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAGTAAGAGGAAAATGATCCCCAGAGGAGACAATATAACATCAGAT  450

seq1  ATGCTCACATTCCTACTGTTAAGAGTCCAATAGAAATACAAAGCTAATAA  498
      | ||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ACGCTCACATTCCCACTGTTAAGAGTCCAATAGAAATACAAAGCTAATAA  500

seq1  CCCTAACATAGAGAGAGAACATCTAGAGCAAACCCATGCATACTCTGTGA  548
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CCCTAACATAGAGAGAGAATATCTAGAGCAAACCCATGCATACTCTGTGA  550

seq1  TAGTTGCCTCAGTCTCTGTGAGCCACTATAAACACTGCTACACTGGTTTT  598
      ||||||| ||||||||||||||||||||| ||||||||||||||||||||
seq2  TAGTTGCTTCAGTCTCTGTGAGCCACTATGAACACTGCTACACTGGTTTT  600

seq1  GTTAGCTGTGTTCTCCTGGTTTTAATTTGGTTAGATATAACTTTAAAGTA  648
      ||||||||| |||||||||| |||||||||||||||||||||||||||||
seq2  GTTAGCTGTTTTCTCCTGGTGTTAATTTGGTTAGATATAACTTTAAAGTA  650

seq1  TGTGTCTATAATTCTCTGAATGTCCTTAATGCTTGCTTTACTATCTCCTT  698
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGTGTCTATAATTCTCTGAATGTCCTTAATGCTTGCTTTACTCTCTCCTT  700

seq1  TTCATCT  705
      |||||||
seq2  TTCATCT  707