BAC Information

Click to search

BAC

Clone NameB6Ng01-126G01
Chromosome13 (Build37)
Map Location 30,765,016 - 30,765,476
singlet/doubletsinglet
Overlap geneDusp22
Upstream geneCdkal1, E2f3, Mboat1, Agtr1a, Uqcrfs1
Downstream geneLOC666443, Irf4, Exoc2, Hus1b, EG432743, LOC100041257, LOC100041266, G630018N14Rik, LOC100042491, Foxq1, LOC100041312, Foxf2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126G01.bB6Ng01-126G01.g
ACCDH928763DH928764
length1,204456
definitionDH928763|Mus musculus domesticus DNA, BAC clone: B6Ng01-126G01, 5' end.DH928764|Mus musculus domesticus DNA, BAC clone: B6Ng01-126G01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatcacatgacctgagacaatggaacaaaggtgatacagtgaag
aagtctttaaaacaaatgaagcaactgagcatccaactgcaaaaaaagtg
aatacagacacagctttctcagtcctcacaaaactggattcaaaaatgga
ttatacatctaaatgtaaacaggaaaactagaaaactcctggaaaataat
ggaaacttgatgacattgggatcataactttttaagggcacaaggtactt
aaacctgcatgacattttgtgggtagctggataaataaacggtccatcca
gacagtgcaagaacattcacacatatatcaagctttgaaaagacagcccc
aaatgtatatattgacaagccaccatgagaaggctctgtactgtgtgctt
ctaaccagtgccattctagaaaggaggcatgatgaagctctcaagcaaac
tgatattttccaggattagatgggagggagggggtagacagagcacaggg
tgtttaaggcagtggaactaactcttatactcacacagtgaaccatatca
ccctcgaacatttctcaaagcctgtaggaagtgcatatctacctagtcta
aatcctctgctgctgagtgggtgataatgagatgtcagtaggggatcgtt
atagcaaacatgctatatgacagagggtctgagaggccagtgtctatggg
aactctgtatttaaagtgtgaacctaaaacatctctgaaaaataaaatac
tggaaaagaaagatacatagtagagagccctctgcatctcctggctccac
actcagattcaacccactgcagactgaaggtattcacaaaagaaacctcc
aagaggtttcaaaagcaaaacttggaattggatgtgcaccaagccctatg
ctaagtgtacacaaggaggagtgtatcagttccctgatgtcttgtccctg
ccttctgctgcccatctccctgcagctcttctgtgggcttcatccaatct
ggtcttccttgtactaggcatgatgctcacttctgtgcaagcatgtacag
acccttctttcctcctccctagtaatacgatgacgactacttatatgcca
tgaacaggaataggtctacaaggccctttatccgtgtcattttattttaa
gagactctatacacttgaatctaagaattccatgtgaaggctccggagaa
ctat
aaattgctcatatcctgcggatgtttgccacaaaagttctaataccattt
gttttaactagtaagaacaagaaggcaggcaagccacccctgtgattttt
tttttctttcccaggcctggtctgaatggacaacatcaatagagagctgt
tgcgttttaggtttaggggagtaaacagggtgtgtctgcttgtacactaa
ttccaaaaacatcttcaattttaccctgttggacggtttgagctgttgat
caggagcaaaatctatttctgtttctgccgtggcacagcccaggttaacc
tcttttagaaaacaatgcctgtgtggttgtgatgcatgttttttctattt
tagggttgggtgttaggaagggaggggtacttgttctgaaacaaagactc
ctggttcaggctttttttcattgaaagccacatcatgttagagtaggtag
tatgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_30765016_30765476
seq2: B6Ng01-126G01.g_66_527

seq1  GAATTCAAATTGCTCATATCCTGCGGATGTTTGCCACAAAAGTTCTAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATTGCTCATATCCTGCGGATGTTTGCCACAAAAGTTCTAATA  50

seq1  CCATTTGTTTTAACTAGTAAGAACAAGAAGGCAGGCAAGCCACCCCTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTGTTTTAACTAGTAAGAACAAGAAGGCAGGCAAGCCACCCCTGTG  100

seq1  ATTTTTTTTTTCTTTCCCAGGCCTGGTCTGAATGGACAACATCAATAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTTTCTTTCCCAGGCCTGGTCTGAATGGACAACATCAATAGAG  150

seq1  AGCTGTTGCGTTTTAGGTTTAGGGGAGTAAACAGGGTGTGTCTGCTTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTGCGTTTTAGGTTTAGGGGAGTAAACAGGGTGTGTCTGCTTGTA  200

seq1  CACTAATTCCAAAAACATCTTCAATTTTACCCTGTTGGACGGTTTGAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAATTCCAAAAACATCTTCAATTTTACCCTGTTGGACGGTTTGAGCT  250

seq1  GTTGATCAGGAGCAAAATCTATTTCTGTTTCTGCCGTGGCACAGCCCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATCAGGAGCAAAATCTATTTCTGTTTCTGCCGTGGCACAGCCCAGG  300

seq1  TTAACCTCTTTTAGAAAACAATGCCTGTGTGGTTGTGATGCATGTTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCTCTTTTAGAAAACAATGCCTGTGTGGTTGTGATGCATGTTTTTT  350

seq1  CTATTTTAGGGTTGGGTGTTAGGAAGGGAGGGGTACTTGTTCTGAAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTAGGGTTGGGTGTTAGGAAGGGAGGGGTACTTGTTCTGAAACAA  400

seq1  AGACTCCTGGTTCAGGC-TGTTTTCATTGAAAGCCACATCATGTAAGAGT  449
      ||||||||||||||||| | |||||||||||||||||||||||| |||||
seq2  AGACTCCTGGTTCAGGCTTTTTTTCATTGAAAGCCACATCATGTTAGAGT  450

seq1  AGGTAGTATGTG  461
      ||||||||||||
seq2  AGGTAGTATGTG  462