BAC Information

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BAC

Clone NameB6Ng01-126I23
Chromosome13 (Build37)
Map Location 119,555,988 - 119,731,659
singlet/doubletdoublet
Overlap geneFgf10
Upstream geneHcn1, LOC100041695, LOC674926, Mrps30, LOC668309, LOC100041278
Downstream geneLOC100041298, LOC100041757, Nnt, Paip1, LOC100041802, 4833420G17Rik, 3110070M22Rik, EG633640
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126I23.bB6Ng01-126I23.g
ACCDH928898DH928899
length1,13466
definitionDH928898|Mus musculus domesticus DNA, BAC clone: B6Ng01-126I23, 5' end.DH928899|Mus musculus domesticus DNA, BAC clone: B6Ng01-126I23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,730,519 - 119,731,659)(119,555,988 - 119,556,053)
sequence
gaattcattacctcagacctctcattgactctggcttcagaagattctta
aagctttacatacatacaaacaaacaaatggcaaacaagcaagactgtgc
tttgaagttgtgacatcttacatgtccttaaaggtgtgtgaaaggctgga
aaatagagtgttaaccatgttttgaatatcacttagaacagggatcgtca
acctgcttactgtgacccctttgccaaacttcaatctcaaaatacttaat
tacaatctgtaatagtagcaaaattatagttatgaggtagcaacaaaaat
aattttacgtttgggggtactctacaacatgaggaactgtgttaaagggt
tgcagctttaggaagaaggttgagaaccactgacttagatattgaagtaa
attcacttatcccttccagaacagataatgaaatagaacttaaagaaaat
ttgtttggaatgagttcctgctatggtttacagatatattttatgaacca
agcaacatatattcaaaaagcctctgaggttatgtaaaagcaaacatcaa
gcaaacaaaaaataataacaatcaaatcttccaagtagcacactagcata
aaactaagttgtgttttaacaattcattttgctaaggttgctccaagtta
tagaccttgtcctgtgaaatgtggaatcataatattgtatttggtaaaag
ttttgctcctttttaaaaattataataagacccaaatatcttgtttcatc
aaaaaattctagtgttggtaactgcacttgagtgtaaattgcttgtatcc
cacaatgcttcaggatttccttagcatgctttgatctaatttggtgcccc
gacatcacttcctatgccacaaggttgaaagaagatcaaatgtttctctt
aagtttttccactctctaattctttctcatctatttagaattgcttttct
tagtgagcagttaggatatactatagaaatgaaagttatttttctcttag
aaaacaatgggtcatctacattttcttcagaaaatgatatatgcatttat
ttcttaaactaggaatgcctccagaaaatgtgtgcagtgatgaatgtgaa
tcatttggtttcccttatggaaatcacttttgga
tctttttataaaggttcccaagactctgcactagaaacggggagggaggg
aaggagggagggagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_119730519_119731659
seq2: B6Ng01-126I23.b_50_1183 (reverse)

seq1  TCCAAAAGTGATTTCATAAAGGGAAAACAAATGGATTTCACATTTCACCA  50
      |||||||||||||||   |||||||| ||||||   |||||| |||| ||
seq2  TCCAAAAGTGATTTCCATAAGGGAAACCAAATG--ATTCACA-TTCATCA  47

seq1  CTGCACACATTTATCCTGGAGCCATTCTTAGTTTAAGAAATAAATGCATA  100
      |||||||||||  | |||||| ||||| ||||||||||||||||||||||
seq2  CTGCACACATT--TTCTGGAGGCATTCCTAGTTTAAGAAATAAATGCATA  95

seq1  TATCATTTTCTGAAGAAAATGTAGATGACCCATTTGTTTTCTAAGAGAAA  150
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TATCATTTTCTGAAGAAAATGTAGATGACCCA-TTGTTTTCTAAGAGAAA  144

seq1  AATAACTTTCATTTTCTATAGTATATCCTAACTGCTCACTAAGAAAAGCA  200
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AATAACTTTCA-TTTCTATAGTATATCCTAACTGCTCACTAAGAAAAGCA  193

seq1  ATTCTAAATAGATGAGAAAGAATTAGAGAGTGGAAAAACTTAAGAGAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAAATAGATGAGAAAGAATTAGAGAGTGGAAAAACTTAAGAGAAAC  243

seq1  ATTTGATCTTCTTTCAACCTTGTGGCATAGGAAGTGATGTCGGGGCACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGATCTTCTTTCAACCTTGTGGCATAGGAAGTGATGTCGGGGCACCA  293

seq1  AATTAGATCAAAGCATGCTAAGGAAATCCTGAAGCATTGTGGGATACAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGATCAAAGCATGCTAAGGAAATCCTGAAGCATTGTGGGATACAAG  343

seq1  CAATTTACACTCAAGTGCAGTTACCAACACTAGAATTTTTTGATGAAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTACACTCAAGTGCAGTTACCAACACTAGAATTTTTTGATGAAACA  393

seq1  AGATATTTGGGTCTTATTATAATTTTTAAAAAGGAGCAAAACTTTTACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTTGGGTCTTATTATAATTTTTAAAAAGGAGCAAAACTTTTACCA  443

seq1  AATACAATATTATGATTCCACATTTCACAGGACAAGGTCTATAACTTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAATATTATGATTCCACATTTCACAGGACAAGGTCTATAACTTGGA  493

seq1  GCAACCTTAGCAAAATGAATTGTTAAAACACAACTTAGTTTTATGCTAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCTTAGCAAAATGAATTGTTAAAACACAACTTAGTTTTATGCTAGT  543

seq1  GTGCTACTTGGAAGATTTGATTGTTATTATTTTTTGTTTGCTTGATGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTACTTGGAAGATTTGATTGTTATTATTTTTTGTTTGCTTGATGTTT  593

seq1  GCTTTTACATAACCTCAGAGGCTTTTTGAATATATGTTGCTTGGTTCATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTACATAACCTCAGAGGCTTTTTGAATATATGTTGCTTGGTTCATA  643

seq1  AAATATATCTGTAAACCATAGCAGGAACTCATTCCAAACAAATTTTCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATCTGTAAACCATAGCAGGAACTCATTCCAAACAAATTTTCTTT  693

seq1  AAGTTCTATTTCATTATCTGTTCTGGAAGGGATAAGTGAATTTACTTCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTATTTCATTATCTGTTCTGGAAGGGATAAGTGAATTTACTTCAA  743

seq1  TATCTAAGTCAGTGGTTCTCAACCTTCTTCCTAAAGCTGCAACCCTTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAAGTCAGTGGTTCTCAACCTTCTTCCTAAAGCTGCAACCCTTTAA  793

seq1  CACAGTTCCTCATGTTGTAGAGTACCCCCAAACGTAAAATTATTTTTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTCCTCATGTTGTAGAGTACCCCCAAACGTAAAATTATTTTTGTT  843

seq1  GCTACCTCATAACTATAATTTTGCTACTATTACAGATTGTAATTAAGTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACCTCATAACTATAATTTTGCTACTATTACAGATTGTAATTAAGTAT  893

seq1  TTTGAGATTGAAGTTTGGCAAAGGGGTCACAGTAAGCAGGTTGACGATCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGATTGAAGTTTGGCAAAGGGGTCACAGTAAGCAGGTTGACGATCC  943

seq1  CTGTTCTAAGTGATATTCAAAACATGGTTAACACTCTATTTTCCAGCCTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTAAGTGATATTCAAAACATGGTTAACACTCTATTTTCCAGCCTT  993

seq1  TCACACACCTTTAAGGACATGTAAGATGTCACAACTTCAAAGCACAGTCT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACACCTTTAAGGACATGTAAGATGTCACAACTTCAAAGCACAGTCT  1043

seq1  TGCTTGTTTGCCATTTGTTTGTTTGTATGTATGTAAAGCTTTAAGAATCT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTTTGCCATTTGTTTGTTTGTATGTATGTAAAGCTTTAAGAATCT  1093

seq1  TCTGAAGCCAGAGTCAATGAGAGGTCTGAGGTAATGAATTC  1141
      |||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGCCAGAGTCAATGAGAGGTCTGAGGTAATGAATTC  1134

seq1: chr13_119555988_119556053
seq2: B6Ng01-126I23.g_71_136

seq1  TCTTTTTATAAAGGTTCCCAAGACTCTGCACTAGAAACGGGGAGGGAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTATAAAGGTTCCCAAGACTCTGCACTAGAAACGGGGAGGGAGGG  50

seq1  AAGGAGGGAGGGAGAG  66
      ||||||||||||||||
seq2  AAGGAGGGAGGGAGAG  66