BAC Information

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BAC

Clone NameB6Ng01-128D07
Chromosome13 (Build37)
Map Location 102,829,770 - 102,830,959
singlet/doubletsinglet
Overlap genenone
Upstream gene4933416M06Rik, LOC100039971, LOC100039983, Pik3r1
Downstream geneCd180, Mast4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128D07.bB6Ng01-128D07.g
ACCDH930121DH930122
length1,0451,169
definitionDH930121|Mus musculus domesticus DNA, BAC clone: B6Ng01-128D07, 5' end.DH930122|Mus musculus domesticus DNA, BAC clone: B6Ng01-128D07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccacttctaatacaattatttggttc
tctggagtctaacttcttgagttctttgtatattttggatattatacctc
tattggatgtagaattggtaaagatcttttcccaatctcttggttgccat
tttgtcctattgacagtatcctttgccttacagaagctttgcaattgttt
gcaagtgcaattctttgctatatgaggtcccatttgtcaattctttatct
tagagcataagctattggtgttctgttcaggaaattttcccctgtgtcca
tgtgctcaagactcttccccactttcttttctattagtttcagtgtatct
ggttttatgtagaggtcattggtccatttggacttgagctttgcacaagg
agataagaatggattgatttgcattcttctgcattctaaccagaagttga
gccagcaccatttgttgaaaatgctgtcatttttccactggatagttttc
gctcctttgtcaaagtgaccataggtgtgtgagttcatttctgggtcttc
agttctatttcatcgatatacctgtctgttgctgtaccagtatcatgaag
tttttatcacaattgctctgtagtacagcttgaggtcaggcatggtgatt
ccaccagaagttctttttattgttgagaatagttttttctgtcctgagat
ttttgttcttccacatgaatttgcaaatttgctctttctaactctatgaa
gaattgagtaagaattttgatggggattgcactgaatctgttgatttgtt
ttggcagatggccatttttactatattaatccgccaatccatgagcatgg
gagatctttacatttctgagatcgtctttcgatttctttcttcagagagt
ggaagttctgttgaagatctttcaacttgctaagtaagaatcacacaatg
tattttatatcatttgcaactgtataagggtataatttcctaatctcttc
tcagcctcttatcctggatttgtggagtaattttatccagcacct
gaattctatgtgtgggaggtgtggatactctcaaggtcatctttctagac
cattgcagtgctagctaacaaataacttgttttaaacaactaatacagac
acttccagttcatttcaaggactatattatttttacttctttgtttttat
aattggaccttactaaaaatttttcagttttaacagtttcttatttgtta
tatgtgtagagaaatatgacaagaactattataaaatagctgtattaggc
ttgctactaaaatctatttagagtattatgtatagattctgtcttactca
aagtataatcacgtacttatttttctctactttctaagggcagtttgctt
tgagaaatatatccgaagataaaaggttcaccagaaaggattatttataa
aggcatatgttttgtaattataagcgtgcttgtgtgtacatacatgtgta
tgtctgcctgtgtatgtatatatccttactagccatttccttccacagac
attatattacataattgttctgtcctttgtaattttgaactgtcattatg
tcctagagatttccccatccttccttttagtacgtaacagtctgtcttca
tttcattattttcatttttttctttattactgcatgttagtacattctga
agaatgcatgagactttactcaaccacctgtcctgccactgtcctttggg
tgttcaacctctggctattacaaaaaaatgtcgcaacaaatcattttttc
tatgtatcatactcacatattttgtactcacacaggattatatataggca
agactcttaacagtgaggtttctgatacaaggaaaagtcatctataactt
tgataaatattactaaatcatttctcaagttattcagttgtagccatttc
aacttccaactgcaatgtattagagtgtctatttctcagagtctcatcag
aaaacatgccatttaaaagtactgcactcaaactctaaatgaaacgctgc
ctcagcatacactctcatttccatttctttaggtcatttctatgtcttat
ttttcccctgtgtctcttggatcatgctcatatatattggcaccaatttg
gattttgcaccatgtccagaattgccttctgtgtgctatgagcttcatca
tatatatgaaatgctatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_102829770_102830959
seq2: B6Ng01-128D07.g_67_1235

seq1  GAATTCTATGTGTGGGAGGTGTGGATACTCTCAAGGTCATCTTTCTAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGTGTGGGAGGTGTGGATACTCTCAAGGTCATCTTTCTAGAC  50

seq1  CATTGCAGTGCTAGCTAACAAATAACTTGTTTTAAACAACTAATACAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCAGTGCTAGCTAACAAATAACTTGTTTTAAACAACTAATACAGAC  100

seq1  ACTTCCAGTTCATTTCAAGGACTATATTATTTTTACTTCTTTGTTTTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCAGTTCATTTCAAGGACTATATTATTTTTACTTCTTTGTTTTTAT  150

seq1  AATTGGACCTTACTAAAAATTTTTCAGTTTTAACAGTTTCTTATTTGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGACCTTACTAAAAATTTTTCAGTTTTAACAGTTTCTTATTTGTTA  200

seq1  TATGTGTAGAGAAATATGACAAGAACTATTATAAAATAGCTGTATTAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTAGAGAAATATGACAAGAACTATTATAAAATAGCTGTATTAGGC  250

seq1  TTGCTACTAAAATCTATTTAGAGTATTATGTATAGATTCTGTCTTACTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTACTAAAATCTATTTAGAGTATTATGTATAGATTCTGTCTTACTCA  300

seq1  AAGTATAATCACGTACTTATTTTTCTCTACTTTCTAAGGGCAGTTTGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATAATCACGTACTTATTTTTCTCTACTTTCTAAGGGCAGTTTGCTT  350

seq1  TGAGAAATATATCCGAAGATAAAAGGTTCACCAGAAAGGATTATTTATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAATATATCCGAAGATAAAAGGTTCACCAGAAAGGATTATTTATAA  400

seq1  AGGCATATGTTTTGTAATTATAAGCGTGCTTGTGTGTACATACATGTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATATGTTTTGTAATTATAAGCGTGCTTGTGTGTACATACATGTGTA  450

seq1  TGTCTGCCTGTGTATGTATATATCCTTACTAGCCATTTCCTTCCACAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCCTGTGTATGTATATATCCTTACTAGCCATTTCCTTCCACAGAC  500

seq1  ATTATATTACATAATTGTTCTGTCCTTTGTAATTTTGAACTGTCATTATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATTACATAATTGTTCTGTCCTTTGTAATTTTGAACTGTCATTATG  550

seq1  TCCTAGAGATTTCCCCATCCTTCCTTTTAGTACGTAACAGTCTGTCTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGAGATTTCCCCATCCTTCCTTTTAGTACGTAACAGTCTGTCTTCA  600

seq1  TTTCATTATTTTCATTTTTTTCTTTATTACTGCATGTTAGTACATTCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTATTTTCATTTTTTTCTTTATTACTGCATGTTAGTACATTCTGA  650

seq1  AGAATGCATGAGACTTTACTCAACCACCTGTCCTGCCACTGTCCTTTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGCATGAGACTTTACTCAACCACCTGTCCTGCCACTGTCCTTTGGG  700

seq1  TGTTCAACCTCTGGCTATTACAAAAAAATGTCGCAACAAATCATTTTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAACCTCTGGCTATTACAAAAAAATGTCGCAACAAATCATTTTTTC  750

seq1  TATGTATCATACTCACATATTTTGTACTCACACAGGATTATATATAGGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATCATACTCACATATTTTGTACTCACACAGGATTATATATAGGCA  800

seq1  AGACTCTTAACAGTGAGGTTTCTGATACAAGGAAAAGTCATCTATAACTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCTTAACAGTGAGGTTTCTGATACAAGGAAAAGTCATCTATAACTT  850

seq1  TGATAAATATTACTAAATCATTTCTTCAAGGTTATTCAGGTTGTAGCCAT  900
      |||||||||||||||||||||||| |||| |||||||| |||||||||||
seq2  TGATAAATATTACTAAATCATTTC-TCAA-GTTATTCA-GTTGTAGCCAT  897

seq1  TTCAACTTCCAACTGCAATGTATTAGAGTGTCTATTTCTCAGGAGTCTCA  950
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTCAACTTCCAACTGCAATGTATTAGAGTGTCTATTTCTCA-GAGTCTCA  946

seq1  TCAAGAAAACATGCCATTTAAAAGTACTGCACCTCAAAACTCTTAAATGA  1000
      || |||||||||||||||||||||||||||| ||| |||||| |||||| 
seq2  TC-AGAAAACATGCCATTTAAAAGTACTGCA-CTC-AAACTC-TAAATG-  991

seq1  AAACGCTGCCTCAGCATTACACTCTCATTTTCCATTTCTTTAGGGTCATT  1050
      |||||||||||||||| |||||||||| |||||||||||||| |||||||
seq2  AAACGCTGCCTCAGCA-TACACTCTCA-TTTCCATTTCTTTA-GGTCATT  1038

seq1  TCTATGTCTTATTTTTTCCCCCTGTGTCTCTGTGATCCATGCTCATATAT  1100
      ||||||||||||||||  |||||||||||||  ||| |||||||||||||
seq2  TCTATGTCTTATTTTT--CCCCTGTGTCTCTTGGAT-CATGCTCATATAT  1085

seq1  AATTGCCACAATTTGTATTTGTCACCATGGTTTCTAGA--TGCCTTCTGT  1148
      | | ||  ||||||| ||||  |||||||   || |||  ||||||||||
seq2  ATTGGCACCAATTTGGATTTTGCACCATG---TCCAGAATTGCCTTCTGT  1132

seq1  GTGCTATGGGAAGCCTTCATC-TATGATATGAAATGCATATTA  1190
      |||||||| |    ||||||| ||| ||||||||||| |||||
seq2  GTGCTATGAG----CTTCATCATAT-ATATGAAATGC-TATTA  1169