BAC Information

Click to search

BAC

Clone NameB6Ng01-129A02
Chromosome13 (Build37)
Map Location 29,207,317 - 29,207,888
singlet/doubletsinglet
Overlap genenone
Upstream genePrl5a1, LOC100042388, LOC100042393, LOC100042399, Ppia-ps13_297.1, LOC626683, 2610307P16Rik, Sox4
Downstream geneLOC100041135, Cdkal1, E2f3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129A02.bB6Ng01-129A02.g
ACCDH930704DH930705
length1,094567
definitionDH930704|Mus musculus domesticus DNA, BAC clone: B6Ng01-129A02, 5' end.DH930705|Mus musculus domesticus DNA, BAC clone: B6Ng01-129A02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttcggagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaatgatcctttcccaatctgttggtggtct
ttttgtcttactgactgtcttttgccttgcagaaactttggagtttcatt
aggtcccatttgtcaattctcgatcttacagtacaagccattgctgttct
gttcaggaatttttcccctgtgcccatatcttcaaggcttttccccactt
tcccctctataagtttcagtgtctctggttttatgtgaagttccttgatc
cacttagatttgaccttagtacaaggagataaatatggatcgattggcat
tcttctacacgataacaaccagttgtgccagcaccaattgttgaaaatgc
tgtctttcttccactgaatagttttagctcccttgttgaagatcaagtga
ccataggtgtgtgggttcatttctgggtcttcaattctattccattggtc
tacttgtctgtctctataccagtaccatgcagtttttatcacaattgctc
tgtagtaaagctttaggtcaggcatggtgactccaccagaggttctttta
tccttgagaagactttttgctatcctaggtttttttgttattccagatga
atttgcaatttgctccttctaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgctttttgcaagatagccatttt
tacatgttgatcctgccaatccatgagcatgggagatctttccatcttct
gagatcttctttaatttccttcttcagagatttgaagtttttatcataca
aatctttcactttccttagtagagtcacgccaagatattttaatataatt
gtgaactattgagaagggttgtttccctaaattcttcccagcccgttaat
cttggaagaagaaggcattcgaccttggtgagttaatttatatccagcac
cttcacggagtctggtatcagggtttaggagtcccctggagaaa
tccgtttccagctgagcctacgtcatcatcctcatttctaccatcaatct
tgtcttctaagtagccactagagtttcccattaacctgagcttctagcct
tctggggttttctaacctgtaccaccaaactcctccacctttctgattct
gaaggcctaagtggtaccacctggtggtacttagtcatggcaatgacccc
caccctacccccttcttggcaactgattttctatattggctatttttcat
gcttctgtgacacgagacctttaaaaaacaatgtaagatataaggattta
ttttagtaaatgccttcagatggttcatttcatcatggcgaggaggatgg
taagcccttggtgtcatggttgtcagagagcaggagcaagaagaaagctg
gtacttaatgggctttctcctacacctttttgtttgtttgtttgtttctg
gattcctaaactatgggacagtgtcatctatcatcagcatggaatcactc
cacaactccccaccaactgactcccctctagaggcatcctcagggggtat
actcacacgtgtatcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_29207317_29207888
seq2: B6Ng01-129A02.g_66_638

seq1  GAATTCT-TGTTTCCAGCTGAGCCTACGTCATCATCCTCATTTCTACCAT  49
      |||||||  |||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCGTTTCCAGCTGAGCCTACGTCATCATCCTCATTTCTACCAT  50

seq1  CAATCTTGTCTTCTAAGTAGCCACTAGAGTTTCCCATTAACCTGAGCTTC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTTGTCTTCTAAGTAGCCACTAGAGTTTCCCATTAACCTGAGCTTC  100

seq1  TAGCCTTCTGGGGTTTTCTAACCTGTACCACCAAACTCCTCCACCTTTCT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTTCTGGGGTTTTCTAACCTGTACCACCAAACTCCTCCACCTTTCT  150

seq1  GATTCTGAAGGCCTAAGTGGTACCACCTGGTGGTACTTAGTCATGGCAAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTGAAGGCCTAAGTGGTACCACCTGGTGGTACTTAGTCATGGCAAT  200

seq1  GACCCCCACCCTACCCCCTTCTTGGCAACTGATTTTCTATATTGGCTATT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCCACCCTACCCCCTTCTTGGCAACTGATTTTCTATATTGGCTATT  250

seq1  TTTCATGCTTCTGTGACACGAGACCTTTAAAAAACAATGTAAGATATAAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGCTTCTGTGACACGAGACCTTTAAAAAACAATGTAAGATATAAG  300

seq1  GATTTATTTTAGTAAATGCCTTCAGATGGTTCATTTCATCATGGCGAGGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATTTTAGTAAATGCCTTCAGATGGTTCATTTCATCATGGCGAGGA  350

seq1  GGATGGTAAGCCCTTGGTGTCATGGTTGTCAGAGAGCAGGAGCAAGAAGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGTAAGCCCTTGGTGTCATGGTTGTCAGAGAGCAGGAGCAAGAAGA  400

seq1  AAGCTGGTACTTAATGGGCTTTCTCCTACACCTTTTTGTTTGTTTGTTTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGTACTTAATGGGCTTTCTCCTACACCTTTTTGTTTGTTTGTTTG  450

seq1  TTTCTGGATTCCTAAACTATGGGACAGTGTCATCTATCATCAGCATGGAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGATTCCTAAACTATGGGACAGTGTCATCTATCATCAGCATGGAA  500

seq1  TCACTCCACAACTCCCCACCAACTGACTCCCCTCTAGAGGCATCCTCAGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCCACAACTCCCCACCAACTGACTCCCCTCTAGAGGCATCCTCAGG  550

seq1  GGGTATACTCACACGTGTATCAT  572
      |||||||||||||||||||||||
seq2  GGGTATACTCACACGTGTATCAT  573