BAC Information

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BAC

Clone NameB6Ng01-129L15
Chromosome13 (Build37)
Map Location 103,772,099 - 103,933,852
singlet/doubletdoublet
Overlap geneMast4
Upstream geneCd180
Downstream geneEG621312, EG432800, LOC432801, LOC100040045, Ppia-ps13_1282.1, Sfrs12, Erbb2ip, LOC100040086, D130037M23Rik, Nln, Sgtb, 2410002O22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129L15.bB6Ng01-129L15.g
ACCDH931235DH931236
length1,1081,069
definitionDH931235|Mus musculus domesticus DNA, BAC clone: B6Ng01-129L15, 5' end.DH931236|Mus musculus domesticus DNA, BAC clone: B6Ng01-129L15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,932,741 - 103,933,852)(103,772,099 - 103,773,172)
sequence
gaattctgattttgctatttccatggagaaatgttaacttattttaacgt
tactcagtattataccttctgccttaagtaacccagttaagagcacagca
aacatagggtattttatcactatggtgatggaggagaaccaggttctgtg
atagtgaggctgcacaactcctctgacacacaactgtaagaactggacac
acacacacacacacacacacttatactttcttacaaataaagttcatcac
ttcttgataaagaacttatattttcacctaagaattggggcttaggggcc
agacagtggttttagcagcttgcttgcttagctgtgagcccttgcctatc
tagagaacttaatctgtatcaataggggagatgagagtttctactcacag
ggctctgaggatgttgcaaaccctggtgtgcaccaaagccttgggctggt
tgttacaccacttttataggtaaagtttaggaaaaggaattgctcactgg
tattcttcctgtttagaccagctcagatgttgcttaggtagtacagtttc
tgtatagtatatagtacatagtacatggtatatattatatagcgtatagt
tgcattcagccaaccagcaattactgaatttgtatcaagggctgtccttt
tttccaggaacggtgggtatgcaaatgaataaccctgtttcctgtatctg
aggatcttagcaacacgattaaataatttctttctactaaaggaaaaaga
aaaactaatctgtagattttttttatataaatgaactataatatctttct
gttgctaacaattaagttcattcttagatgtattcttagattttttaaag
catattggcaaggttggggggcagtaaggattccctccatcacattagcc
ttgctgtccagtaccccttggcttagatatctcctttctccaaacataaa
ggaagtgatgacttaaggtatgggaagtgattcaacgcctcctgccctgc
aagctatcatttagatttctcagtagatggtattctaaaggtagaatcct
tcagacaggttaatgtccattgtttataggaaccatgttttcatagtgtt
ggatgctg
gaattcatttgaaatctgtgactgtccttgactaaaaccaaaccaaacca
accaaccaaccaaccaaccaaccaaacaaacaaacaaacaaaaaaacaac
ctaaactacacttgaaagcctaacttaactgatttttttctctattattt
ttcacttgcccttttatgttggtgagacttcaaagcattcagtgttgaga
taacatctctatgaatctaacctttattcatttatgatttttttaaaatt
attttatttattttaaagtttggtatgttggggtgttttccctgcacgtc
tgtgtgtacactgtgtgcatgcagttcctagacaggccagaagagggtgt
catatcctctggaactggagctacaaagaactgtaaactgcctagtgggt
gctgggagccaaactcaggtcctctagaatagtagccaatgcccttactg
ttgaaccatctctctagctctacctttattcatttataaaatgaatgcgt
acaacatcgtgcacagcaaataatcagcatataatgtgtttattttattt
tgaaattcaagagtagggcaggcagaattcttagaagaactcggatgtcc
agcattccgaggtcaggctgctgatcccaagtcatcaaagacagtaccca
ggaaacaaaatggcttccaagaagttatgaatctgtaagcacccacttag
ccccaaaacagcttatcttggatgggtcttttaaacggatctgaagcccc
aggaactgcttttctcggcctctaagaccaggcaagctaccacaagctcc
atactttgcaagaaactcaattctgccagggactggggagtttgggaaga
ggatcctgctgagagccctgtccaggcttctgatcagcagagcggtaaga
ggagctctgaatccatggtaatttgtgagatgaaatacggacactgatta
cacactggtttacgtgtttttcacctcaggtagtaagataattgggaaga
attcaggatatacctccctgcagagaagatgagtaaggggacattttgga
agcacgcttccaaatattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_103932741_103933852
seq2: B6Ng01-129L15.b_50_1157 (reverse)

seq1  CAGCATTCAAACACTATGAAAACATGGTTTCTCTATAACATGGACATAAC  50
      ||||| || |||||||||||||||||||| || || |  |||||||| | 
seq2  CAGCA-TCCAACACTATGAAAACATGGTTCCTATAAACAATGGACATTAA  49

seq1  CCTGTCTGAAGGATCTAACTTTTAGAATACCATCTAACTGAGAAATCTAA  100
      ||||||||||||||   || ||||||||||||||| ||||||||||||||
seq2  CCTGTCTGAAGGATTCTACCTTTAGAATACCATCT-ACTGAGAAATCTAA  98

seq1  ATGATAGGCTTGCAGGGCGGGAGGCGTTGAATCACTTCCCATACCTTAAG  150
      |||||| ||||||||||| |||||||||||||||||||||||||||||||
seq2  ATGATA-GCTTGCAGGGCAGGAGGCGTTGAATCACTTCCCATACCTTAAG  147

seq1  TCATCACTTCCTTTATGTTTGGAGAAAGGAGATATCTAAGCCAAGGGGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCACTTCCTTTATGTTTGGAGAAAGGAGATATCTAAGCCAAGGGGTA  197

seq1  CTGGACAGCAAGGCTAATGTGATGGAGGGAATCCTTACTGCCCCCCAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACAGCAAGGCTAATGTGATGGAGGGAATCCTTACTGCCCCCCAACC  247

seq1  TTGCCAATATGCTTTAAAAAAATCTAAGAATACATCTAAGAATGAACTTA  300
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTGCCAATATGCTTT-AAAAAATCTAAGAATACATCTAAGAATGAACTTA  296

seq1  ATTGTTAGCAACAGAAAGATATTATAGTTCATTTATATAAAAAAAATCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTAGCAACAGAAAGATATTATAGTTCATTTATATAAAAAAAATCTA  346

seq1  CAGATTAGTTTTTCTTTTTCCTTTAGTAGAAAGAAATTATTTAATCGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTAGTTTTTCTTTTTCCTTTAGTAGAAAGAAATTATTTAATCGTGT  396

seq1  TGCTAAGATCCTCAGATACAGGAAACAGGGTTATTCATTTGCATACCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAAGATCCTCAGATACAGGAAACAGGGTTATTCATTTGCATACCCAC  446

seq1  CGTTCCTGGAAAAAAGGACAGCCCTTGATACAAATTCAGTAATTGCTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCCTGGAAAAAAGGACAGCCCTTGATACAAATTCAGTAATTGCTGGT  496

seq1  TGGCTGAATGCAACTATACGCTATATAATATATACCATGTACTATGTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGAATGCAACTATACGCTATATAATATATACCATGTACTATGTACT  546

seq1  ATATACTATACAGAAACTGTACTACCTAAGCAACATCTGAGCTGGTCTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTATACAGAAACTGTACTACCTAAGCAACATCTGAGCTGGTCTAA  596

seq1  ACAGGAAGAATACCAGTGAGCAATTCCTTTTCCTAAACTTTACCTATAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAGAATACCAGTGAGCAATTCCTTTTCCTAAACTTTACCTATAAA  646

seq1  AGTGGTGTAACAACCAGCCCAAGGCTTTGGTGCACACCAGGGTTTGCAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTGTAACAACCAGCCCAAGGCTTTGGTGCACACCAGGGTTTGCAAC  696

seq1  ATCCTCAGAGCCCTGTGAGTAGAAACTCTCATCTCCCCTATTGATACAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCAGAGCCCTGTGAGTAGAAACTCTCATCTCCCCTATTGATACAGA  746

seq1  TTAAGTTCTCTAGATAGGCAAGGGCTCACAGCTAAGCAAGCAAGCTGCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTCTCTAGATAGGCAAGGGCTCACAGCTAAGCAAGCAAGCTGCTA  796

seq1  AAACCACTGTCTGGCCCCTAAGCCCCAATTCTTAGGTGAAAATATAAGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCACTGTCTGGCCCCTAAGCCCCAATTCTTAGGTGAAAATATAAGTT  846

seq1  CTTTATCAAGAAGTGATGAACTTTATTTGTAAGAAAGTATAAGTGTGTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATCAAGAAGTGATGAACTTTATTTGTAAGAAAGTATAAGTGTGTGT  896

seq1  GTGTGTGTGTGTGTGTCCAGTTCTTACAGTTGTGTGTCAGAGGAGTTGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTCCAGTTCTTACAGTTGTGTGTCAGAGGAGTTGTG  946

seq1  CAGCCTCACTATCACAGAACCTGGTTCTCCTCCATCACCATAGTGATAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCACTATCACAGAACCTGGTTCTCCTCCATCACCATAGTGATAAA  996

seq1  ATACCCTATGTTTGCTGTGCTCTTAACTGGGTTACTTAAGGCAGAAGGTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCTATGTTTGCTGTGCTCTTAACTGGGTTACTTAAGGCAGAAGGTA  1046

seq1  TAATACTGAGTAACGTTAAAATAAGTTAACATTTCTCCATGGAAATAGCA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACTGAGTAACGTTAAAATAAGTTAACATTTCTCCATGGAAATAGCA  1096

seq1  AAATCAGAATTC  1112
      ||||||||||||
seq2  AAATCAGAATTC  1108

seq1: chr13_103772099_103773172
seq2: B6Ng01-129L15.g_69_1137

seq1  GAATTCATTTGAAATCTGTGACTGTCCTTGACTAAAACCAAACCAAACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTGAAATCTGTGACTGTCCTTGACTAAAACCAAACCAAACCA  50

seq1  ACCAACCAACCAACCAACCAACCAAACAAACAAACAAACAAAAAAACAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACCAACCAACCAACCAACCAAACAAACAAACAAACAAAAAAACAAC  100

seq1  CTAAACTACACTTGAAAGCCTAACTTAACTGATTTTTTTCTCTATTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACTACACTTGAAAGCCTAACTTAACTGATTTTTTTCTCTATTATTT  150

seq1  TTCACTTGCCCTTTTATGTTGGTGAGACTTCAAAGCATTCAGTGTTGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTGCCCTTTTATGTTGGTGAGACTTCAAAGCATTCAGTGTTGAGA  200

seq1  TAACATCTCTATGAATCTAACCTTTATTCATTTATGATTTTTTTAAAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATCTCTATGAATCTAACCTTTATTCATTTATGATTTTTTTAAAATT  250

seq1  ATTTTATTTATTTTAAAGTTTGGTATGTTGGGGTGTTTTCCCTGCACGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTATTTTAAAGTTTGGTATGTTGGGGTGTTTTCCCTGCACGTC  300

seq1  TGTGTGTACACTGTGTGCATGCAGTTCCTAGACAGGCCAGAAGAGGGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTACACTGTGTGCATGCAGTTCCTAGACAGGCCAGAAGAGGGTGT  350

seq1  CATATCCTCTGGAACTGGAGCTACAAAGAACTGTAAACTGCCTAGTGGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCCTCTGGAACTGGAGCTACAAAGAACTGTAAACTGCCTAGTGGGT  400

seq1  GCTGGGAGCCAAACTCAGGTCCTCTAGAATAGTAGCCAATGCCCTTACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGAGCCAAACTCAGGTCCTCTAGAATAGTAGCCAATGCCCTTACTG  450

seq1  TTGAACCATCTCTCTAGCTCTACCTTTATTCATTTATAAAATGAATGCGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACCATCTCTCTAGCTCTACCTTTATTCATTTATAAAATGAATGCGT  500

seq1  ACAACATCGTGCACAGCAAATAATCAGCATATAATGTGTTTATTTTATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATCGTGCACAGCAAATAATCAGCATATAATGTGTTTATTTTATTT  550

seq1  TGAAATTCAAGAGTAGGGCAGGCAGAATTCTTAGAAGAACTCGGATGTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTCAAGAGTAGGGCAGGCAGAATTCTTAGAAGAACTCGGATGTCC  600

seq1  AGCATTCCGAGGTCAGGCTGCTGATCCCAAGTCATCAAAGACAGTACCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCCGAGGTCAGGCTGCTGATCCCAAGTCATCAAAGACAGTACCCA  650

seq1  GGAAACAAAATGGCTTCCAAGAAGTTATGAATCTGTAAGCACCCACTTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACAAAATGGCTTCCAAGAAGTTATGAATCTGTAAGCACCCACTTAG  700

seq1  CCCCAAAACAGCTTATCTTGGATGGGTCTTTTAAACGGATCTGAAGCCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAAACAGCTTATCTTGGATGGGTCTTTTAAACGGATCTGAAGCCCC  750

seq1  AGGAACTGCTTTTCTCGGCCTCTAAGACCAGGCAAGCTACCACAAGCTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTGCTTTTCTCGGCCTCTAAGACCAGGCAAGCTACCACAAGCTCC  800

seq1  ATAC-TTGCAAGAAACTCAATTCTGCCAGGGACTGGGGAGTTTGGGAAGA  849
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTTGCAAGAAACTCAATTCTGCCAGGGACTGGGGAGTTTGGGAAGA  850

seq1  GGATCCTGCTGAGAGCCCTGTCCAGGCTTCTGATCAGCAGAGCGGTAAGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCTGCTGAGAGCCCTGTCCAGGCTTCTGATCAGCAGAGCGGTAAGA  900

seq1  GGAGCTCTGGAATCCATGGTAATTTGTGAGATGAAATACGGACACAGAAT  949
      |||||||| |||||||||||||||||||||||||||||||||||| || |
seq2  GGAGCTCT-GAATCCATGGTAATTTGTGAGATGAAATACGGACACTGATT  949

seq1  ACAACACATGTTTACGTGTTTATACACCTCAGGGAAGTAAGAT-ATTGGA  998
      || ||||  |||||||||||| | ||||||| || |||||||| ||||| 
seq2  AC-ACACTGGTTTACGTGTTT-TTCACCTCA-GGTAGTAAGATAATTGGG  996

seq1  AGAAATTCAGGATATACCCACTAGCAAGAGAGAGAAGAGAAAAGGGGACA  1048
      |  |||||||||||||||  |  || ||||| ||| |||  |||||||||
seq2  AAGAATTCAGGATATACCTCCCTGC-AGAGA-AGATGAG-TAAGGGGACA  1043

seq1  TTTTGGGAGCAGCTTTCCAAATATTT  1074
      |||||| ||||   ||||||||||||
seq2  TTTTGGAAGCACGCTTCCAAATATTT  1069