BAC Information

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BAC

Clone NameB6Ng01-130O11
Chromosome13 (Build37)
Map Location 77,863,886 - 77,864,976
singlet/doubletsinglet
Overlap gene1110033M05Rik
Upstream geneMctp1, EG666607, Ankrd32, 2210408I21Rik, LOC631139, LOC675063, D13Mgi7
Downstream gene1700013G10Rik, Nr2f1, EG666856, LOC268676, LOC100042683, LOC622365, LOC100043052
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130O11.bB6Ng01-130O11.g
ACCDH932098DH932099
length1,0811,157
definitionDH932098|Mus musculus domesticus DNA, BAC clone: B6Ng01-130O11, 5' end.DH932099|Mus musculus domesticus DNA, BAC clone: B6Ng01-130O11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccagatatttgatacttaaaagagaaaatataatttcatgaaa
agaactttggaccctccaaaatattaacatgacacagagtaagaagctac
ttacctacaaatgcctagtctcttacagacagacagacagacacacacac
acattcactcactcacacacacattcactcactcacacaggatatattgt
tacctatagatcactcctatattccaaagcccaccagaattattcagact
taacactccttagcagtttagactgtcctgccttgtcttgccagaggcta
cccaataacagatgtggttcttaaaactttacgcctgcatctgcctggag
accaaaacctagtatttgtcttgtaaccatgcatggggatctatgcctct
catttcttggaggaactttgggcagcattaaactcctcttacaatgtgtt
gactgaactttgcatattaccaattagaaatacagaaaaacaagtgaaaa
agaattataatcagaaagttgtacttaaggaactaattccaactggcctc
attcataccaggatttgacttatttcatgagactatagaggtgatggaag
aatcatatgtgtatacaggaaggacatggatgatcagggatacggtaatc
tccaaaatgttccccagtgagacctaactaactccaaagagtcataacct
ccaacactgttattagacgcgttctcacgaccggccaggaagaacaccac
agaccagaatcttctgcggcaaaactttattgcttacatcttcaggagtc
agagtgcaagaagcaagagagagagaaaacgaaaccccgtccctattaag
gagaattttccttcgcctaggacgtgtcactccctgattggctgcagccc
atcggccgagttgacgtcacgaggaaggcagagcacatggagtgaagaac
caccctcggcacatgcgcagattattgttaccactagaacacagctgtca
gcggcatcttgtaacgcgaatgtgggcgcggctccacacacaccatataa
gaagctgctttggtaacaatacgagatctaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttatacaaccactctggagatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaagatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctggccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggag
caaaacacccttggaaggagttacagagacaaagtttggagttgagataa
aaggatggaccatgtagacactaccatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatgctggaa
aggaccctgatatagctgtctcttggcagagtatgcctgggcctagcaac
atagagtggatgctcacagtcggctattgaatggatcacatgcccaattg
agagctagagaagtaccaagagctaaagggatctgcacccttataggtgg
aacacattatgactacagatcccggagctcttgatctagctgatttgcat
caaggatgctatgcgccatcactggaagagagcccatggactgcactttt
atggctcgatcagggaactgcccaggccataaaggggatggggtgcgtag
tggatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_77863886_77864976
seq2: B6Ng01-130O11.b_50_1130 (reverse)

seq1  TTAGATCTACCGTATTGGTTACCAAAGCCAGC-TCTTATATGGTGTTGTG  49
      ||||||||  |||||| |||||||||| |||| |||||||||||| ||||
seq2  TTAGATCT--CGTATT-GTTACCAAAG-CAGCTTCTTATATGGTG-TGTG  45

seq1  TTGGGAGCCGCGCCCACATTCGCCGTTACAAGATGGCGCTGACAGCTGTG  99
      |  ||||||||||||||||||| |||||||||||| ||||||||||||||
seq2  T--GGAGCCGCGCCCACATTCG-CGTTACAAGATGCCGCTGACAGCTGTG  92

seq1  TTCTAAGTGGTAAACAAATAATCTGCGCATGTGCCGAGGGTGGTTCTTCA  149
      |||| ||||||||   ||||||||||||||||||||||||||||||||||
seq2  TTCT-AGTGGTAA--CAATAATCTGCGCATGTGCCGAGGGTGGTTCTTCA  139

seq1  CTCCATGTGCTCTGCCTTCCTCGTGACGTCAACTCGGCCGATGGGCTGCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGTGCTCTGCCTTCCTCGTGACGTCAACTCGGCCGATGGGCTGCA  189

seq1  GCCAATCAGGGAGTGACACGTCCTAGGCGAAGGAAAATTCTCCTTAATAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATCAGGGAGTGACACGTCCTAGGCGAAGGAAAATTCTCCTTAATAG  239

seq1  GGACGGGGTTTCGTTTTCTCTCTCTCTTGCTTCTTGCACTCTGACTCCTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACGGGGTTTCGTTTTCTCTCTCTCTTGCTTCTTGCACTCTGACTCCTG  289

seq1  AAGATGTAAGCAATAAAGTTTTGCCGCAGAAGATTCTGGTCTGTGGTGTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGTAAGCAATAAAGTTTTGCCGCAGAAGATTCTGGTCTGTGGTGTT  339

seq1  CTTCCTGGCCGGTCGTGAGAACGCGTCTAATAACAGTGTTGGAGGTTATG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGGCCGGTCGTGAGAACGCGTCTAATAACAGTGTTGGAGGTTATG  389

seq1  ACTCTTTGGAGTTAGTTAGGTCTCACTGGGGAACATTTTGGAGATTACCG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTGGAGTTAGTTAGGTCTCACTGGGGAACATTTTGGAGATTACCG  439

seq1  TATCCCTGATCATCCATGTCCTTCCTGTATACACATATGATTCTTCCATC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCTGATCATCCATGTCCTTCCTGTATACACATATGATTCTTCCATC  489

seq1  ACCTCTATAGTCTCATGAAATAAGTCAAATCCTGGTATGAATGAGGCCAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTATAGTCTCATGAAATAAGTCAAATCCTGGTATGAATGAGGCCAG  539

seq1  TTGGAATTAGTTCCTTAAGTACAACTTTCTGATTATAATTCTTTTTCACT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATTAGTTCCTTAAGTACAACTTTCTGATTATAATTCTTTTTCACT  589

seq1  TGTTTTTCTGTATTTCTAATTGGTAATATGCAAAGTTCAGTCAACACATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTCTGTATTTCTAATTGGTAATATGCAAAGTTCAGTCAACACATT  639

seq1  GTAAGAGGAGTTTAATGCTGCCCAAAGTTCCTCCAAGAAATGAGAGGCAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAGGAGTTTAATGCTGCCCAAAGTTCCTCCAAGAAATGAGAGGCAT  689

seq1  AGATCCCCATGCATGGTTACAAGACAAATACTAGGTTTTGGTCTCCAGGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCCCATGCATGGTTACAAGACAAATACTAGGTTTTGGTCTCCAGGC  739

seq1  AGATGCAGGCGTAAAGTTTTAAGAACCACATCTGTTATTGGGTAGCCTCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCAGGCGTAAAGTTTTAAGAACCACATCTGTTATTGGGTAGCCTCT  789

seq1  GGCAAGACAAGGCAGGACAGTCTAAACTGCTAAGGAGTGTTAAGTCTGAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGACAAGGCAGGACAGTCTAAACTGCTAAGGAGTGTTAAGTCTGAA  839

seq1  TAATTCTGGTGGGCTTTGGAATATAGGAGTGATCTATAGGTAACAATATA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCTGGTGGGCTTTGGAATATAGGAGTGATCTATAGGTAACAATATA  889

seq1  TCCTGTGTGAGTGAGTGAATGTGTGTGTGAGTGAGTGAATGTGTGTGTGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGTGAGTGAGTGAATGTGTGTGTGAGTGAGTGAATGTGTGTGTGT  939

seq1  GTCTGTCTGTCTGTCTGTAAGAGACTAGGCATTTGTAGGTAAGTAGCTTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTCTGTCTGTCTGTAAGAGACTAGGCATTTGTAGGTAAGTAGCTTC  989

seq1  TTACTCTGTGTCATGTTAATATTTTGGAGGGTCCAAAGTTCTTTTCATGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCTGTGTCATGTTAATATTTTGGAGGGTCCAAAGTTCTTTTCATGA  1039

seq1  AATTATATTTTCTCTTTTAAGTATCAAATATCTGGTGAATTC  1091
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATATTTTCTCTTTTAAGTATCAAATATCTGGTGAATTC  1081