BAC Information

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BAC

Clone NameB6Ng01-131J19
Chromosome13 (Build37)
Map Location 88,046,190 - 88,047,328
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC675707
Downstream geneLOC667230, EG435375, Edil3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131J19.bB6Ng01-131J19.g
ACCDH932624DH932625
length1,1351,063
definitionDH932624|Mus musculus domesticus DNA, BAC clone: B6Ng01-131J19, 5' end.DH932625|Mus musculus domesticus DNA, BAC clone: B6Ng01-131J19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatcaggcttctagtaatatatctaagggggaaaatggtaaatt
ctgaaaatttatactaattttaatttaaagcataaacacaaaagtaaaac
caggtataagatatctgttcctgtatttctttgagacaaaacctcattcc
attgcttggtcattgttattaggatgcaatatgtaccctgagagacagaa
agcctttaccatcacccacagctttggactaattttattttattttattc
tattaatatcataaaacttcagccaaaatatatgaaacattaactactta
ttttgaaaaccaaaaaatcaaatttgtattatggtgggataaaaaagttc
aagttgaaaacaatgacgtattctgtgaagagttcacatttcctcaaatt
attattctaatatagttttaaaaagtaaggaactaatataaaattcaaac
aactagaaatgaaagcataaaaatcagagtctcctagttatgagtgtcat
gaagaatggtgttaattataaatcaggactataaaagacaatagttaaaa
ataagatgtgtaatttatactctctcatctacttttaatgaggatttctt
cacttgacacttgacactgatatattcatcagaaccttgaaagaaaatgt
aaattaaagaattaatcattaccttaccactatgactacaaatagaacaa
aagactattttctttttcagaccatgaagcatagcagtttcacatcgtaa
atacattgatgataataataactctattcgggttttaaagcacatatata
tatacactgtcccagttccacttgatactaatgttaggtgtttcaagaaa
cctcacttcgaacattctctgcatttaagaatgcacacacacacaaacac
acacacacacacacacacacacacacattatatatatatatatatatata
tatatatatatatatgtatatatatatatatatataatttgctcacgagc
cacctactaggaatgtgcattcgagtttgtcaataactgtctgggattgg
gcttctacttttgaaaaagaatgatcaagaaaacagactcgaacacagtt
ggaatgagccttaattctttaaggtctgagaccta
gaattcactaagaatgttacctattcagtaacatttgaatttacttttgt
agagacagtgaaactaattaggcattacaatttacttgaatagagctaga
aaagcccagggcttgtctgcatagtaattacttaggacaatagccgagtc
atacccaaacacaggaatatataatgacctaggaaataggtggattgtag
tattattcatggaagggttagtagaatggaattcccctggtgcaggtttt
tttcctgacccagaggaatagcataatcaggtatttactaacggacccct
ggtggtgggtttaacaatagactagcattgtatcagagcattcacctggc
tcctgtgcttaactgatcttaattaaagacagttcctattctcagttgaa
aacatggcctggttcccgccatatttttatgtatgcattttctttgttga
cagatgtgttcacctaggttacttgtttttcttctctattatataagact
ggtgttcactttgtgaaaatacattcagataccacactcccttgtgtagc
ctccctgagcctgaagtgggcttgtgcagaccttgttgccactaaggtgg
tgccacctgggctgtagccttccgacctaaatggctctattgttctgtta
cttgctgctgctcttctctgagactctgctacctgctgagagacccttga
gacattcaggagacacatcctatcctgcatgtttgcctacaggctggctc
taggcaccaagaatggattggcaggagatgggcctccccccttataagca
cagtcttagtaaactcctgagctttgatcagagcaatttgtcttggtctc
attcttctctccccgtctagtctcctttcagccccagcctgtctttcaga
gtacccggttcttgtagggggcgagtggcttacaactacaccctttgtgt
catatttgtttgtcatttcctcaccaactcctgctcacctgtaccagaac
cctgtttcctgtagattgaggattcattgagttcatctgccgcagtatag
aacataagtcatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_88046190_88047328
seq2: B6Ng01-131J19.b_48_1182 (reverse)

seq1  TAGGTCTTCAAGCCTTAAAG-ATTAAGGCTCATTCAAACTTGGTCTGAGT  49
      |||||| |||  |||||||| |||||||||||||| ||||  ||  ||||
seq2  TAGGTC-TCAGACCTTAAAGAATTAAGGCTCATTCCAACTGTGTTCGAGT  49

seq1  CTGTCTTCCTGGCTCATTCTTCTCAGAAAGATGAAGCACAATCACAGACA  99
      |||| || || | |||||||| |   ||||  ||||| ||||| ||||||
seq2  CTGT-TTTCTTGATCATTCTTTTTCAAAAGTAGAAGCCCAATCCCAGACA  98

seq1  GGTAATGGACAAAAT-GAATGTAAATTTCCTAGTAGGTGGTTAGTGAGCA  148
       || || |||||| | ||||| | | |||||||||||||| | |||||||
seq2  -GTTATTGACAAACTCGAATGCACA-TTCCTAGTAGGTGGCTCGTGAGCA  146

seq1  AATTATATATATATATATATATATATATATATATATATATATATATATAT  198
      |||  |||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAT--TATATATATATATATATATACATATATATATATATATATATATAT  194

seq1  ATATATATATATAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTG  244

seq1  TGTGTGTGCATTCTTAAATGCAGAGAATGTTCGAAGTGAGGTTTCTTGAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGCATTCTTAAATGCAGAGAATGTTCGAAGTGAGGTTTCTTGAA  294

seq1  ACACCTAACATTAGTATCAAGTGGAACTGGGACAGTGTATATATATATGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTAACATTAGTATCAAGTGGAACTGGGACAGTGTATATATATATGT  344

seq1  GCTTTAAAACCCGAATAGAGTTATTATTATCATCAATGTATTTACGATGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAAAACCCGAATAGAGTTATTATTATCATCAATGTATTTACGATGT  394

seq1  GAAACTGCTATGCTTCATGGTCTGAAAAAGAAAATAGTCTTTTGTTCTAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGCTATGCTTCATGGTCTGAAAAAGAAAATAGTCTTTTGTTCTAT  444

seq1  TTGTAGTCATAGTGGTAAGGTAATGATTAATTCTTTAATTTACATTTTCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGTCATAGTGGTAAGGTAATGATTAATTCTTTAATTTACATTTTCT  494

seq1  TTCAAGGTTCTGATGAATATATCAGTGTCAAGTGTCAAGTGAAGAAATCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGTTCTGATGAATATATCAGTGTCAAGTGTCAAGTGAAGAAATCC  544

seq1  TCATTAAAAGTAGATGAGAGAGTATAAATTACACATCTTATTTTTAACTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAAAAGTAGATGAGAGAGTATAAATTACACATCTTATTTTTAACTA  594

seq1  TTGTCTTTTATAGTCCTGATTTATAATTAACACCATTCTTCATGACACTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTTTATAGTCCTGATTTATAATTAACACCATTCTTCATGACACTC  644

seq1  ATAACTAGGAGACTCTGATTTTTATGCTTTCATTTCTAGTTGTTTGAATT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTAGGAGACTCTGATTTTTATGCTTTCATTTCTAGTTGTTTGAATT  694

seq1  TTATATTAGTTCCTTACTTTTTAAAACTATATTAGAATAATAATTTGAGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTAGTTCCTTACTTTTTAAAACTATATTAGAATAATAATTTGAGG  744

seq1  AAATGTGAACTCTTCACAGAATACGTCATTGTTTTCAACTTGAACTTTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGAACTCTTCACAGAATACGTCATTGTTTTCAACTTGAACTTTTT  794

seq1  TATCCCACCATAATACAAATTTGATTTTTTGGTTTTCAAAATAAGTAGTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCACCATAATACAAATTTGATTTTTTGGTTTTCAAAATAAGTAGTT  844

seq1  AATGTTTCATATATTTTGGCTGAAGTTTTATGATATTAATAGAATAAAAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTCATATATTTTGGCTGAAGTTTTATGATATTAATAGAATAAAAT  894

seq1  AAAATAAAATTAGTCCAAAGCTGTGGGTGATGGTAAAGGCTTTCTGTCTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAATTAGTCCAAAGCTGTGGGTGATGGTAAAGGCTTTCTGTCTC  944

seq1  TCAGGGTACATATTGCATCCTAATAACAATGACCAAGCAATGGAATGAGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGTACATATTGCATCCTAATAACAATGACCAAGCAATGGAATGAGG  994

seq1  TTTTGTCTCAAAGAAATACAGGAACAGATATCTTATACCTGGTTTTACTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTCAAAGAAATACAGGAACAGATATCTTATACCTGGTTTTACTT  1044

seq1  TTGTGTTTATGCTTTAAATTAAAATTAGTATAAATTTTCAGAATTTACCA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTTATGCTTTAAATTAAAATTAGTATAAATTTTCAGAATTTACCA  1094

seq1  TTTTCCCCCTTAGATATATTACTAGAAGCCTGATGGAATTC  1139
      |||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCCCTTAGATATATTACTAGAAGCCTGATGGAATTC  1135