BAC Information

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BAC

Clone NameB6Ng01-132J05
Chromosome13 (Build37)
Map Location 102,636,544 - 102,769,772
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC619865, LOC619917, EG619937, 4933416M06Rik, LOC100039971, LOC100039983, Pik3r1
Downstream geneCd180, Mast4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132J05.bB6Ng01-132J05.g
ACCDH933344DH933345
length1,0101,109
definitionDH933344|Mus musculus domesticus DNA, BAC clone: B6Ng01-132J05, 5' end.DH933345|Mus musculus domesticus DNA, BAC clone: B6Ng01-132J05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,769,206 - 102,769,772)(102,636,544 - 102,637,669)
sequence
gaattcttcaggttctcttagtaggttgcctccctaccatgtgcaaggct
ctaataccaagtcccagttctgaaaggggaaacttagaatcaactcttac
ataaatgtgtgatagagctttctgctaaagcctcttgaaccagattagga
caattttaaactattgcttacatttatcgaataactataggggtattgag
gtttttttacttgcaactgatttatagttttatttgtttatgttggatat
tttgcaagctaaactaaataatgctaacttctgcaacattgaaatttcaa
accttagcagttcattgtcataaaaagtttctcagttcaggcaatgtcga
atctgattttctttgactcctggctaatttccacaacttccattaaaatc
agtaatatcaatgtttgcacaaaaaacattaatgttttaaaatttttatt
attttgtttattagatcttctatgaacctctataacataaaaaaaatttt
ttttcatattaccagcatacactggcacagagtaaacattaccatttggg
aatgtggtaacggaagaataagaagaaaagaggaagatgccgaagaccaa
aacccaacaaggggggaaatattcctgcagctccacgtccaggatttgag
atgtctgatgaagttatctggaccaatattggctcaagtagtcctacttt
ttcagttctgttacctgcaacatctattgcctctcttggtcagccccact
ccatgccaagagtattcagttactgtctcaagcttttggcctctccaaca
tcctggagtctttatgtaaacttcacagcatctcacagcagtcttcaagg
acctttgaccctgccagacactactttctggcactatagagcaaatctcc
gtgactcctctaaatcatatgtctctcatcatgcttatgaaaccagtagc
aatgtggacagtcataccaagttctgtggccacttcgaatagtataaaac
cttgtacctt
gaattcatttgactttgctagactattcagagacacattactaaagtaag
ttttttgatacattgaaaattggcaaataaattacttaaatggacaaagc
taggaagcacatttggaagtcgcacaagttgctctttttttttcctgagt
cacaaaccatgctgatggccttctgtttctgagaccctgatctctgtaca
cgttgcataccatcattcacctccccaaccctgctcagtggtcctgtgcc
atgtttcctgccgtccatgctaattgcatgcactttcccttgctttgaac
ttgctgtgacaaatacagtattatacaatgacctgagctaaaacaaggac
atgtctctttgaactgaagtctctcagtaatcagaaatgtgttcgtgtta
agcagtaaaaggcctcggcctgtggttttttcacagaaacaggaagcaaa
ctaagacagcaactaaacctgaaacttgattaatgacatggctggtgggg
aaatgggcatttggctagaattacaggcagcagactggctgggactggct
ctgcacactgctgccctgatgagccactagcagaatgagaatcggaatgt
ggaatttctagattcttaatggtgttgagtgtcaactgtaatgttgtaac
actgtaatcgagtgtataggactttattctttttttttaaatatttttta
ttaggtattttcctcatttacatttccaatgctatcccaaaagtccccca
taccctccctcccactcctctacccacccactcccactttttggccctgg
cgttcccctgtactggggcatataaagtttgcaagttcaatgggcctctc
tttccagtgatggccgactaggccatcttttgatacatatgcagctagag
tcaagagctccagggtactggttagttcataatgtgtccacctatagggt
gcagatccctttagctcttgggtactttttctagctccccaatggggcct
gtgatcatcaatagctgactgtggagcatccacttctgtgtttgctaggc
tcggatagtcctccaagagacgctacatctgggtctttcagcaatctgct
tcttcgtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_102769206_102769772
seq2: B6Ng01-132J05.b_48_614 (reverse)

seq1  TCTTCCGTTACCACATTCCCAAATGGTAATGTTTACTCTGTGCCAGTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCGTTACCACATTCCCAAATGGTAATGTTTACTCTGTGCCAGTGTA  50

seq1  TGCTGGTAATATGAAAAAAAATTTTTTTTATGTTATAGAGGTTCATAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGTAATATGAAAAAAAATTTTTTTTATGTTATAGAGGTTCATAGAA  100

seq1  GATCTAATAAACAAAATAATAAAAATTTTAAAACATTAATGTTTTTTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTAATAAACAAAATAATAAAAATTTTAAAACATTAATGTTTTTTGTG  150

seq1  CAAACATTGATATTACTGATTTTAATGGAAGTTGTGGAAATTAGCCAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATTGATATTACTGATTTTAATGGAAGTTGTGGAAATTAGCCAGGA  200

seq1  GTCAAAGAAAATCAGATTCGACATTGCCTGAACTGAGAAACTTTTTATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAGAAAATCAGATTCGACATTGCCTGAACTGAGAAACTTTTTATGA  250

seq1  CAATGAACTGCTAAGGTTTGAAATTTCAATGTTGCAGAAGTTAGCATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAACTGCTAAGGTTTGAAATTTCAATGTTGCAGAAGTTAGCATTAT  300

seq1  TTAGTTTAGCTTGCAAAATATCCAACATAAACAAATAAAACTATAAATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTAGCTTGCAAAATATCCAACATAAACAAATAAAACTATAAATCA  350

seq1  GTTGCAAGTAAAAAAACCTCAATACCCCTATAGTTATTCGATAAATGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCAAGTAAAAAAACCTCAATACCCCTATAGTTATTCGATAAATGTAA  400

seq1  GCAATAGTTTAAAATTGTCCTAATCTGGTTCAAGAGGCTTTAGCAGAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATAGTTTAAAATTGTCCTAATCTGGTTCAAGAGGCTTTAGCAGAAAG  450

seq1  CTCTATCACACATTTATGTAAGAGTTGATTCTAAGTTTCCCCTTTCAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATCACACATTTATGTAAGAGTTGATTCTAAGTTTCCCCTTTCAGAA  500

seq1  CTGGGACTTGGTATTAGAGCCTTGCACATGGTAGGGAGGCAACCTACTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGACTTGGTATTAGAGCCTTGCACATGGTAGGGAGGCAACCTACTAA  550

seq1  GAGAACCTGAAGAATTC  567
      |||||||||||||||||
seq2  GAGAACCTGAAGAATTC  567

seq1: chr13_102636544_102637669
seq2: B6Ng01-132J05.g_68_1176

seq1  GAATTCATTTGACTTTGCTAGACTATTCAGAGACACATTACTAAAGTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTGACTTTGCTAGACTATTCAGAGACACATTACTAAAGTAAG  50

seq1  TTTTTTGATACATTGAAAATTGGCAAATAAATTACTTAAATGGACAAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGATACATTGAAAATTGGCAAATAAATTACTTAAATGGACAAAGC  100

seq1  TAGGAAGCACATTTGGAAGTCGCACAAGTTGCTCTTTTTTTTTCCTGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAGCACATTTGGAAGTCGCACAAGTTGCTCTTTTTTTTTCCTGAGT  150

seq1  CACAAACCATGCTGATGGCCTTCTGTTTCTGAGACCCTGATCTCTGTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACCATGCTGATGGCCTTCTGTTTCTGAGACCCTGATCTCTGTACA  200

seq1  CGTTGCATACCATCATTCACCTCCCCAACCCTGCTCAGTGGTCCTGTGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGCATACCATCATTCACCTCCCCAACCCTGCTCAGTGGTCCTGTGCC  250

seq1  ATGTTTCCTGCCGTCCATGCTAATTGCATGCACTTTCCCTTGCTTTGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCCTGCCGTCCATGCTAATTGCATGCACTTTCCCTTGCTTTGAAC  300

seq1  TTGCTGTGACAAATACAGTATTATACAATGACCTGAGCTAAAACAAGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTGACAAATACAGTATTATACAATGACCTGAGCTAAAACAAGGAC  350

seq1  ATGTCTCTTTGAACTGAAGTCTCTCAGTAATCAGAAATGTGTTCGTGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTCTTTGAACTGAAGTCTCTCAGTAATCAGAAATGTGTTCGTGTTA  400

seq1  AGCAGTAAAAGGCCTCGGCCTGTGGTTTTTTCACAGAAACAGGAAGCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTAAAAGGCCTCGGCCTGTGGTTTTTTCACAGAAACAGGAAGCAAA  450

seq1  CTAAGACAGCAACTAAACCTGAAACTTGATTAATGACATGGCTGGTGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGACAGCAACTAAACCTGAAACTTGATTAATGACATGGCTGGTGGGG  500

seq1  AAATGGGCATTTGGCTAGAATTACAGGCAGCAGACTGGCTGGGACTGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGCATTTGGCTAGAATTACAGGCAGCAGACTGGCTGGGACTGGCT  550

seq1  CTGCACACTGCTGCCCTGATGAGCCACTAGCAGAATGAGAATCGGAATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACACTGCTGCCCTGATGAGCCACTAGCAGAATGAGAATCGGAATGT  600

seq1  GGAATTTCTAGATTCTTAATGGTGTTGAGTGTCAACTGTAATGTTGTAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTCTAGATTCTTAATGGTGTTGAGTGTCAACTGTAATGTTGTAAC  650

seq1  ACTGTAATCGAGTGTATAGGACTTTATTCTTTTTTTTTAAATATTTTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAATCGAGTGTATAGGACTTTATTCTTTTTTTTTAAATATTTTTTA  700

seq1  TTAGGTATTTTCCTCATTTACATTTCCAATGCTATCCCAAAAGTCCCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTATTTTCCTCATTTACATTTCCAATGCTATCCCAAAAGTCCCCCA  750

seq1  TACCCTCCCTCCCACTCCTCTACCCACCCACTCCCACTTTTTGGCCCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTCCCTCCCACTCCTCTACCCACCCACTCCCACTTTTTGGCCCTGG  800

seq1  CGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTTCAATGGGCCTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTTCAATGGGCCTCTC  850

seq1  TTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAG  900

seq1  TCAAGAGCTCCAGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGG  950
      |||||||||||||||||||||||||||||||||||   ||||||||||||
seq2  TCAAGAGCTCCAGGGTACTGGTTAGTTCATAATGT--GTCCACCTATAGG  948

seq1  GTTGCAGATCCCTTTAGCTCCTTGGGTACTTTTTCTAGCTCCCCCATTGG  1000
      | ||||||||||||||||| |||||||||||||||||||||||| ||   
seq2  G-TGCAGATCCCTTTAGCT-CTTGGGTACTTTTTCTAGCTCCCCAAT---  993

seq1  GGGCCCTGTGATCCATCCAATAGCTGACTGT-GAGCATCCACTTCTGTGT  1049
      ||| |||||||| ||| |||||||||||||| ||||||||||||||||||
seq2  GGGGCCTGTGAT-CAT-CAATAGCTGACTGTGGAGCATCCACTTCTGTGT  1041

seq1  TTGCTAGGCCTCGGGATAGTCTCACAAGAGACAGCTACATCTGGGTCCTT  1099
      |||||||| ||| ||||||||   |||||||| ||||||||||||| |||
seq2  TTGCTAGG-CTC-GGATAGTCCTCCAAGAGAC-GCTACATCTGGGT-CTT  1087

seq1  TCAGCAAAATCTTGCTTCCTTTCGTCA  1126
      |||||  |||| ||||||  |||||||
seq2  TCAGC--AATC-TGCTTC--TTCGTCA  1109