BAC Information

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BAC

Clone NameB6Ng01-133I18
Chromosome14 (Build37)13 (Build37)
Map Location 64,509,383 - 64,510,07757,242,995 - 57,244,117
singlet/doubletsingletsinglet
Overlap gene2610028A01Rik
Upstream geneWdfy2, LOC668268, EG432867, EG654465, EG654458, 2410125J01Rik, Defb42, LOC100042978, Ctsb, Fdft1, Neil2, Gata4, LOC100042988, LOC432868, Blk, LOC668293, BC065085, Tdh, Mtmr9, Xkr6, LOC668306
Downstream geneSox7, 4930578I06Rik, Rp1l1, 4933401F05Rik, 1700007N14Rik, 1700049K14Rik, Msra, Kif13b, Hmbox1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133I18.bB6Ng01-133I18.g
ACCDH934064DH934065
length9251,116
definitionDH934064|Mus musculus domesticus DNA, BAC clone: B6Ng01-133I18, 5' end.DH934065|Mus musculus domesticus DNA, BAC clone: B6Ng01-133I18, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(64,509,383 - 64,510,077)(57,242,995 - 57,244,117)
sequence
gaattctatcacagacgagcttaagttgttgagtgatttggtgagtgttc
aaacgtaagaggaatgaccacctggcagtgctggtgcgcatgcctttaat
cccagcacttgggaggcagaggtgaacagatctcagtgagtttgaaacca
tcttggtctacacagtagtaaattccaagacagccagggctacacagaga
aaccctgtcttggggggtggggagggaaggcctctgtgttgagtcacatg
cacgggtcacacttttgtctgataaaccacagttgagagagacaggtagg
atgacagctgtaaagttctctcccttggatatggccacctggttctgcct
tctctggaggccttttcctggtctcatgtctatcaaagccaagtgggtgt
tgagggaactgcatgggagtctcttaatggcagaataagctgcgttgtgg
agccatggcaggaaatggaggcgacagtcttcacctgcctggctgctctc
aggcctgtgagaaactctgcgctctaaagcctgtaccctaaagcccagca
ctgacacactgatgcacacacccttcactgctgtcagctttactgctcat
gagtatgggatttcaaactactagcataaaaactgcaggcttacagtaaa
acatttaacttagtgacttgccttgccatttttgtgactattttcttcta
agtataacaaaatagatttttttaatggcaacattaagaaactttttctc
taactaccatgcgtattgaaatagtttaaataagctatctgcagcttatc
gggttttaagaaattagagaggtcatcattcctaatttcctttctgtaaa
agtaagtttaggtacacactcaggtttttaaagttatgtgatggagggtt
gttttagttagaaccttactgctgt
gaattctcctgggagggaccaagtgtgcccttggtcttccacctgtttgg
tgctctgcttgctgttagaaatcacccctgttctctggtcctgagttttc
ccttgtgagcccagccaaactaaggaggtcagcagggaggggcttcaagc
ccatgcctccagtttaggtttaggatgccatcttctgcctggctctggcc
acatgctctgctaagacctgaaaaaatacaggggaatgtgtgggctgagg
acactctcagccactagccacctcctgccctgactgcttaccagaaaaca
tgcctgtggatctgagacataaagggaaggagaaaattattctaagcctc
tcagttctatctggaaactcaggaaagcacaggttaaaagctcttctttc
tagtgagaaatacttgcaacttggtatggctgagaggcaaaaagcagcat
tcttttcttacagaaggaatagaaataagcgcatgaaaggggactgctgg
aacggtactcggccagttgggcttttctaaaattaaagtcccttaataat
atggatgtgttatctgattatatcataaatacctggctgccacagaatac
ttgattcttttgaacctccaaaactcaacttggagcatcgaagatatgct
cctttatggcccgaattgtctccctctcgctctctggcaaccgaaagcag
atagacacacacacgcacgcgcacacacacacagatctgatagacacaca
tctgatagacacagacacacctctctctctctctctctctctctctctct
ctctcacacacacacacacacacacatacatctgatagacacacatctga
tagacacagacacatctctctctctctctctctctcacacacacacacat
ctgatagacacacatctgatagacacagacatctctcttttttctttttt
ctctctctcttttttaaacacacaaacacaaacaataacacatacactag
gatagaagcttctacagagaaacacctcaagtattattggaacaaccacc
aaaaactgttttctggaatgaatgttaattggttaataagggatttatcc
ccactttcctttaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_64509383_64510077
seq2: B6Ng01-133I18.b_269_966

seq1  AGGCCTCTGTGTTGAGTCACATGCACGGGTCACACTTTTGTCTGATAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTCTGTGTTGAGTCACATGCACGGGTCACACTTTTGTCTGATAAAC  50

seq1  CACAGTTGAGAGAGACAGGTAGGATGACAGCTGTAAAGTTCTCTCCCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTGAGAGAGACAGGTAGGATGACAGCTGTAAAGTTCTCTCCCTTG  100

seq1  GATATGGCCACCTGGTTCTGCCTTCTCTGGAGGCCTTTTCCTGGTCTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGGCCACCTGGTTCTGCCTTCTCTGGAGGCCTTTTCCTGGTCTCAT  150

seq1  GTCTATCAAAGCCAAGTGGGTGTTGAGGGAACTGCATGGGAGTCTCTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATCAAAGCCAAGTGGGTGTTGAGGGAACTGCATGGGAGTCTCTTAA  200

seq1  TGGCAGAATAAGCTGCGTTGTGGAGCCATGGCAGGAAATGGAGGCGACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGAATAAGCTGCGTTGTGGAGCCATGGCAGGAAATGGAGGCGACAG  250

seq1  TCTTCACCTGCCTGGCTGCTCTCAGGCCTGTGAGAAACTCTGCGCTCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACCTGCCTGGCTGCTCTCAGGCCTGTGAGAAACTCTGCGCTCTAA  300

seq1  AGCCTGTACCCTAAAGCCCAGCACTGACACACTGATGCACACACCCTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGTACCCTAAAGCCCAGCACTGACACACTGATGCACACACCCTTCA  350

seq1  CTGCTGTCAGCTTTACTGCTCATGAGTATGGGATTTCAAACTACTAGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTCAGCTTTACTGCTCATGAGTATGGGATTTCAAACTACTAGCAT  400

seq1  -AAAACTGCAGGCTTACAGTAAAACATTTAACTTAGTGACTTGCCTTGCC  449
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTGCAGGCTTACAGTAAAACATTTAACTTAGTGACTTGCCTTGCC  450

seq1  ATTTTTGTGACTA-TTTCTTCTAAGTATAACAAAATAGATTTTTTTAATG  498
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTGACTATTTTCTTCTAAGTATAACAAAATAGATTTTTTTAATG  500

seq1  GCAACATTAAGAAAC-TTTTCTCTAACTACCATGCGTATTGAAATAGTTT  547
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GCAACATTAAGAAACTTTTTCTCTAACTACCATGCGTATTGAAATAGTTT  550

seq1  AAATAAGCTATCTGCAGCTTATCGGTTTTTAAGAAATTAGAGAGGTCATC  597
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAATAAGCTATCTGCAGCTTATCGGGTTTTAAGAAATTAGAGAGGTCATC  600

seq1  ATTCCTAA-TTCCTTTCTGTAAAAGTAGGTTTAGGTACACACTCAGGTTT  646
      |||||||| |||||||||||||||||| ||||||||||||||||||||||
seq2  ATTCCTAATTTCCTTTCTGTAAAAGTAAGTTTAGGTACACACTCAGGTTT  650

seq1  TTAAAGTTTATGTGATGGAGGGTTGTTTTAGTTAGAACTTTACTGCTGT  695
      |||||| ||||||||||||||||||||||||||||||| ||||||||||
seq2  TTAAAG-TTATGTGATGGAGGGTTGTTTTAGTTAGAACCTTACTGCTGT  698

seq1: chr13_57242995_57244117
seq2: B6Ng01-133I18.g_67_1182 (reverse)

seq1  GTTTAAAGGAAACGTGGGATAAATTCACTATATAAACAATTTAACATTTC  50
      ||||||||||||   |||||||| || || ||| ||| | |||||| |||
seq2  GTTTAAAGGAAAGTGGGGATAAA-TCCCT-TATTAACCAATTAACA-TTC  47

seq1  ATTTCAGAAAACAGTTTTT-GTTGCTGTTCAATAAATACTTGAGTGTTTT  99
      ||| ||||||||||||||| || | ||||| |  ||||||||||   |||
seq2  ATTCCAGAAAACAGTTTTTGGTGGTTGTTCCAATAATACTTGAGGTGTTT  97

seq1  CTCTGTAGAAGCCTCTATCCTAGGTGTGTGTGTGTGTGTGTGTGTGTGTG  149
      |||||||||||| ||||||||| |||| |||||   ||| ||||| ||||
seq2  CTCTGTAGAAGCTTCTATCCTA-GTGTATGTGTTATTGTTTGTGTTTGTG  146

seq1  TGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGATGTCTGT  199
      ||| | | | |||||||||||   | | ||| ||| ||||||||||||||
seq2  TGTTTAAAAAAGAGAGAGAGA---AAAAAGA-AAAAAGAGAGATGTCTGT  192

seq1  GTCTATCAGATGTGTGTCTATCAGATGTGTGTGTGTGTGAGAGAGAGAGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATCAGATGTGTGTCTATCAGATGTGTGTGTGTGTGAGAGAGAGAGA  242

seq1  GAGAGAGAGATGTGTCTGTGTCTATCAGATGTGTGTCTATCAGATGTATG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGATGTGTCTGTGTCTATCAGATGTGTGTCTATCAGATGTATG  292

seq1  TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  342

seq1  AGAGGTGTGTCTGTGTCTATCAGATGTGTGTCTATCAGATCTGTGTGTGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTGTGTCTGTGTCTATCAGATGTGTGTCTATCAGATCTGTGTGTGT  392

seq1  GTGTGTGTGTGTGTGTGTGTCTATCTGCTTTCTGTTGCCAGAAAGC-AGA  448
      ||| | ||| |||||||||||||||||||||| ||||||||| ||| |||
seq2  GTGCGCGTGCGTGTGTGTGTCTATCTGCTTTCGGTTGCCAGAGAGCGAGA  442

seq1  CGGAAGACAATTCGGACCATAAGGGAGTATCTCTTAGATGCTCCAAGTTT  498
       || ||||||||||| |||||| |||| || |||| ||||||||||||| 
seq2  -GGGAGACAATTCGGGCCATAAAGGAGCATATCTTCGATGCTCCAAGTTG  491

seq1  TATTTTCTTTGTTCAAAAGAATCAAATATTCTGTGGCAGCCACGTATTTC  548
        ||||    ||||||||||||||| |||||||||||||||| |||||| 
seq2  AGTTTTGGAGGTTCAAAAGAATCAAGTATTCTGTGGCAGCCAGGTATTTA  541

seq1  TGATATAATCAGATAACACATCAATATTATTAAGAGACTTTAATTTTAGA  598
      |||||||||||||||||||||| ||||||||||| |||||||||||||||
seq2  TGATATAATCAGATAACACATCCATATTATTAAGGGACTTTAATTTTAGA  591

seq1  AAAGCCCAACTGGCCGAGTACCGTTCCAGCAGTCCCCTCTCATGCGCTTA  648
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAAGCCCAACTGGCCGAGTACCGTTCCAGCAGTCCCCTTTCATGCGCTTA  641

seq1  TTTCTATTCCTTCTGTAAGAAAAGAATGCTGCTTTTTGCCTCTCAGCCAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATTCCTTCTGTAAGAAAAGAATGCTGCTTTTTGCCTCTCAGCCAT  691

seq1  ACCAAGTTGCAAGTATTTCTCACTAGAAAGAAGAGCTTTTAACCTGTGCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGTTGCAAGTATTTCTCACTAGAAAGAAGAGCTTTTAACCTGTGCT  741

seq1  TTCCTGAGTTTCCAGATAGAACTGAGAGGCTTAGAATAATTCTCTCCTTC  798
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTCCTGAGTTTCCAGATAGAACTGAGAGGCTTAGAATAATTTTCTCCTTC  791

seq1  CCTCTATGTCTCAGAGCCACAGGCATGCTTTCTGGTAAGCAGTCAGGGCA  848
      ||| ||||||||||| ||||||||||| ||||||||||||||||||||||
seq2  CCTTTATGTCTCAGATCCACAGGCATGTTTTCTGGTAAGCAGTCAGGGCA  841

seq1  GGAGGTGGCTAGTGGCTGAGAGTGTCCTCAGCCCACACATTCCCCTCTAT  898
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGAGGTGGCTAGTGGCTGAGAGTGTCCTCAGCCCACACATTCCCCTGTAT  891

seq1  TTTTTCAGGTCTTAGCAGAGCATGTGGCCAGAGCCAGGCAGAAGATGGCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAGGTCTTAGCAGAGCATGTGGCCAGAGCCAGGCAGAAGATGGCA  941

seq1  TCCTAAACCTAAACTGGAGGCATGGGCTTGAAGCCCCTCCCTGCTGACCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAACCTAAACTGGAGGCATGGGCTTGAAGCCCCTCCCTGCTGACCT  991

seq1  ACTTAGTCTGGCTGGGCTCACAAGGGAAAACTCAGGACCAGAGAACAGGG  1048
       |||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGTTTGGCTGGGCTCACAAGGGAAAACTCAGGACCAGAGAACAGGG  1041

seq1  GTGATTTCTAACAGCAAGCAGAGCACCAAACAGGTGGAAGACCAAGGGCA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTCTAACAGCAAGCAGAGCACCAAACAGGTGGAAGACCAAGGGCA  1091

seq1  CACTTGGTCCCTCCCACTAGAATTC  1123
      ||||||||||||||||  |||||||
seq2  CACTTGGTCCCTCCCAGGAGAATTC  1116