BAC Information

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BAC

Clone NameB6Ng01-133M11
Chromosome13 (Build37)
Map Location 85,198,971 - 85,199,486
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667101, Tmem161b, LOC666795, LOC667111, LOC382786, LOC100042841, LOC100042851
Downstream geneLOC100042857, LOC100042862, Ccnh, Rasa1, LOC435373, LOC675662, Cox7c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133M11.bB6Ng01-133M11.g
ACCDH934240DH934241
length1,1541,173
definitionDH934240|Mus musculus domesticus DNA, BAC clone: B6Ng01-133M11, 5' end.DH934241|Mus musculus domesticus DNA, BAC clone: B6Ng01-133M11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggtggagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctgggggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacaaagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattatatcgaaa
ggatccagatgtagctgtctcttgtgagactttgctggggcctagcaaca
cagaagtggatgctcacagtcagctaatggatggatcacagggctccaat
ggaggagctagagaagtacccaaggagctaatggatctgcaaccctatag
tggacacatatgactaccagtacccggagctctgactctagctgcatatg
tatcaaagatgcctagtcggccatcactgaagagaggtcatgaacgcaac
tttatatgcccagtacaggacgccaggccaagtggatgggtgtggtaagg
ggat
gaattctcacctgaggaataatgaatgtctgcgaagcacctgaaaaaatg
ttcagcattcttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcataccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctcgtgaggatgtggagaaaggaatactcctccattgttcgtggg
attgcaagcttgtacaaccactctggaaataagtctggtggtttcttaga
aaactggacatagtactatcagaagatcccgcaatacctctcctgggcat
atatccagatgttccaaccgtaagaaggacacatgctccactatgttcat
agcagccttatttataatagccagaagctggaaagaacccagatgcccct
caacagaggaatggatacagaaaatgtggtacatttacacaatggattac
tactcagctattaaaaagaatgaatttatgaaattcctaggcaaatggat
ggacctggagggcatcatcttgagtgaggtaacccaatcacaaaagatct
cacatgatatgtagtcactgataagtgggtattagcccagaaacttagaa
taccccagatataagatacaatttgcaaaacacatgaaactcaagaagaa
cgaagaccaaagtgtggacactttgctcctttttagaactgggaacaaaa
cacccatagaaggatttacagagttaaagtttggacctgagatgaaagga
tggaccatctagagactgccatatccggggatccatgccataatcagcct
ccaaaggctgacaccatggtatacagtagcaaggttttgctgaaagaacc
cagatatagctgtctctttgtgaggctatgcccgggcctaataacacaga
agtgggatgctcacagtcagctattggatggatcacagcgtccccaatgg
aggagctagagaaagtacccaaaggtgctaaggggtctgcaccctatagg
agaacaacattatgaactaacagtacacctccccagtacttcccttcccc
aaagctcatgtcctctgctgcatatgtatagagatgggtatggcattgga
atataaatgagaaatctataaagtacctagaggattacttgcattgaatc
aaattggtattatgtaatgggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_85198971_85199486
seq2: B6Ng01-133M11.g_752_1239 (reverse)

seq1  ATCCCATTACATAATAACCCCAAGATTTTGTATTCATAAATCGCCAAGTT  50
      ||||||||||||||||   ||||   |||| ||||   |||   |||| |
seq2  ATCCCATTACATAATA---CCAA---TTTG-ATTC---AAT--GCAAG-T  37

seq1  TATCTTTCTAGTATATTTTAATTAGGTATTTTCTTCATTTATATTTCCAA  100
       |||  |||||  || ||||  |||  ||||   ||||||||| ||||||
seq2  AATC-CTCTAG-GTACTTTA--TAG--ATTT--CTCATTTATA-TTCCAA  78

seq1  TGCTAT-CCCATCTTCTGATACATATGCAGCTAGA-GACATGAGCTTTGG  148
      ||| || |||||| ||| ||||||||||||| ||| |||||||||||| |
seq2  TGCCATACCCATC-TCT-ATACATATGCAGC-AGAGGACATGAGCTTT-G  124

seq1  GGGAGGGGAAGTACTGGGGGGGGTGGTACTGGTTAGTTCATATTGTTGTT  198
      |||| |||||||||||||| ||   ||||| ||||||||||| |||||||
seq2  GGGAAGGGAAGTACTGGGGAGG--TGTACT-GTTAGTTCATAATGTTGTT  171

seq1  CCTCCTATAGGGTTGCAGACCCCTTTAGCACC-TTGGGTACTTTCTCTAG  247
       ||||||||||| |||||||||| |||||||| |||||||||||||||||
seq2  -CTCCTATAGGG-TGCAGACCCC-TTAGCACCTTTGGGTACTTTCTCTAG  218

seq1  CTCCTCCATTGGGGACGCTGTGATCCATCCAATAGCTGACTGTGAGCAT-  296
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTCCTCCATTGGGGACGCTGTGATCCATCCAATAGCTGACTGTGAGCATC  268

seq1  CCACTTCTGTGTTTATTAGGCCCGGGCATAGCCTCAC-AAGAGACAGCTA  345
      ||||||||||| ||||||||||||||||||||||||| ||||||||||||
seq2  CCACTTCTGTG-TTATTAGGCCCGGGCATAGCCTCACAAAGAGACAGCTA  317

seq1  TATCTGGGTTCTTTCAGCAAAACCTTGCTACTGTATACCATGGTGTCAGC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGGTTCTTTCAGCAAAACCTTGCTACTGTATACCATGGTGTCAGC  367

seq1  CTTTGGAGGCTGATTATGGCATGGATCCCCGGATATGGCAGTCTCTAGAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGAGGCTGATTATGGCATGGATCCCCGGATATGGCAGTCTCTAGAT  417

seq1  GGTCCATCCTTTCATCTCAGGTCCAAACTTTAACTCTGTAAATCCTTCTA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCATCCTTTCATCTCAGGTCCAAACTTTAACTCTGTAAATCCTTCTA  467

seq1  TGGGTGTTTTGTTCCCAGTTC  516
      |||||||||||||||||||||
seq2  TGGGTGTTTTGTTCCCAGTTC  488