BAC Information

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BAC

Clone NameB6Ng01-134F10
Chromosome13 (Build37)
Map Location 50,583,400 - 50,584,532
singlet/doubletsinglet
Overlap genenone
Upstream geneCenpp, Tes3-ps, Ecm2, Aspn, Omd, Ogn, Nol8, Iars, LOC667488, LOC670357, EG638833, Gm272, EG667503, EG667507, LOC100040099, LOC625110, LOC676907, LOC667546, LOC667552, LOC100040085, LOC100040159, LOC100040176, LOC100040118, Gm906, 2310081J21Rik, LOC676954, LOC667625, LOC667632, EG667637, Fbxw17, Gm806
Downstream geneEG639044, Gm904, LOC100040315, EG667693, LOC100040161, LOC100040190, EG667712, LOC676997, EG667717, Spin1, 4930519N16Rik, EG667728, LOC667733, Ppia-ps13_636.1, LOC625524, Edg3, Shc3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134F10.bB6Ng01-134F10.g
ACCDH934661DH934662
length1,2291,123
definitionDH934661|Mus musculus domesticus DNA, BAC clone: B6Ng01-134F10, 5' end.DH934662|Mus musculus domesticus DNA, BAC clone: B6Ng01-134F10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtttagctccataccccattttttgattaggttgtttgacttt
ttagaggttagcttcttaagttttttatatattttagatattagccgtct
atcagatttggggattgtgaggattttttccccaatctgtaggttgtaaa
tttgttgtattggttatgtcctttgctttacataagcttttcagtttcat
gaggttccgtttgtcaatttttgacctcagaattgtgtttaggaaatttt
gccccatgccaatgagtccagggctcttttctactttctcctctaataga
ttcagtgtatcctgttttatgttgaggtccttgatccagctggatatgtg
ctgtgtacatcatgacaaatatggatctgttttcatttttctacatactg
actaccacttaaactagcaccatttactgcagatgctttttttattgtat
atttttgacttcttgtcaaagatgaacaatccataagtgtgtgaatttat
ttctgtactttcaattctagtacattgatccatctgcctgtctctgtacc
aatacaatgctgagagagcacagaattctaccagactttcatagaaaaga
taatgccaatacttctcaaactattccacaaaacataaagagaaggaata
gtgacaaactctatgaggccacagtcaccccaatacctaaaacacataaa
gaatcaacaaagcaaatttcagacacatttccctaatggccattgatgca
aaattattcaagaaaatacttgcaaactgaatccaagaaaacatcaaaga
aagcaaccaccatgatcaagtaggctttgtcccaagtgtggttaaatata
tgaaaatccttcaatacattgtaatccactaagtaaaaaactgaaggaaa
aacccacatgattatttgcctagatgtctaaaagcatctgacaaccacac
cctttctgataaaagtcttggagagagcagagagagcccaggggccagga
gatgatggaatacacagctgctgggctgggatggggtttggagacaggtc
tcttagaagctcggacctggataggagcctccaggagtcatgtagttgac
ttagcgaattcccccagtaggaattggacctgacgcactaccttccgttg
cgatggaactctcattaagtgtggactaccttgaagcttgtaccaatgtc
atctcaagaatgcagagtatgagatgaga
gaattccctcatcccaacccactgttacacccctaggtgaattcagcact
gggtctacaccaacttaccctagtccatagactttttgcacctccaacaa
cgcctccaaaagaagaaatttatacctagtactagtatcaatgctgtacg
ttgtttactgtaacttcttccattttctgtggattcaccaaagacagggc
tcctcagttgacctccccacaaccttgttcaaccacacattggacaccag
ttatatctgtccagcagccacagagaactgagtacacctgaaagggagga
tgggaatgaaaaaggacaggcaggtgagagaagaatgaagccaagacaga
gatgtctgaggagggctcaaagtttaatattcagctttgtgtttatatag
gcaaaccccaaagacacatccttttgtttcagctggattgagttgcaaag
caagctcagcaggtaatcaactcctcaaagctcaaaactcaaagttggaa
gttgcaaatgcagcaaggccaagggcagcctccagccaggttgtaaaacc
actggaggtttgtttagcctattcaaggctggggaagggcacattccccc
tgggtcttttaaatttcagatctggatctagcctcctaaagcaaactcat
cacactcctggatttcctggtctaaaagtgtggcagtgtattccaatcca
gcattcagtgctggctatggcaggtgcaccagagatctgcctgccaggga
ccaggaggctcagctcttacttatacaacaacatacaggtggtattgctt
ccaggttcatctctcctgatgcaacccagttttctacacactctgcaaag
catttgaaatcccccctccccctgccttttaattaaacagaagaggggca
gaaccaggtctcctagtatgttcatcttcaacatacacacatttgagtcc
tactctctgccctgaaagagcggtctaagacagatggtctgagatccaca
ctcagagccctgctagagcaggcctgttagaagtgcttcccctcagaatc
ataacaaaagagatgcctagggaggattacatatatttataatggctaag
ctcctaccacgagggaacaaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_50583400_50584532
seq2: B6Ng01-134F10.g_68_1190 (reverse)

seq1  TGTTTG-TCCCTCGTGGTAGGAGCCTAG-CAATATAAATATATGTAATTC  48
      |||||| ||||||||||||||||| ||| || ||||||||||||||| ||
seq2  TGTTTGTTCCCTCGTGGTAGGAGCTTAGCCATTATAAATATATGTAA-TC  49

seq1  CTTCCTAGGCATCTCTTTGTCTATGGATTCTGAGGGGAGACAC-TCTAAC  97
      || |||||||||||||||   ||| |||||||||||||  ||| ||||||
seq2  CTCCCTAGGCATCTCTTTTGTTAT-GATTCTGAGGGGAAGCACTTCTAAC  98

seq1  AGGCCTGGCTCTTAGCCAGGGCCTCTGAGTGTGGGATCTTCAGACCATCT  147
      |||||| |||| ||| ||||| |||||||||| ||||| |||||||||||
seq2  AGGCCT-GCTC-TAG-CAGGG-CTCTGAGTGT-GGATC-TCAGACCATCT  142

seq1  GTCTTAGACCGCCTTCTCTCAGGGCAGAGAGTAGGACTCAAATGTGTGTA  197
      ||||||||||||  ||| ||||||||||||||||||||||||||||||||
seq2  GTCTTAGACCGC--TCTTTCAGGGCAGAGAGTAGGACTCAAATGTGTGTA  190

seq1  TGTTGAAGATGGAACATTACTAGGAGACCTGGTTCTGCCCCTCTTTCTGT  247
      |||||||||| ||||| |||||||||||||||||||||||||| ||||||
seq2  TGTTGAAGAT-GAACA-TACTAGGAGACCTGGTTCTGCCCCTC-TTCTGT  237

seq1  TTAATTAAAAGGCAGGGGGAGGGGGGATTTCAAATGCTTTGCAGAGTGTG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTAAAAGGCAGGGGGAGGGGGGATTTCAAATGCTTTGCAGAGTGTG  287

seq1  TAGAAAACTGGGTTGCATCAGGAGAGATGAACCTGGAAGCAATACCACCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAACTGGGTTGCATCAGGAGAGATGAACCTGGAAGCAATACCACCT  337

seq1  GTATGTTGTTGTATAAGTAAGAGCTGAGCCTCCTGGTCCCTGGCAGGCAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTTGTTGTATAAGTAAGAGCTGAGCCTCCTGGTCCCTGGCAGGCAG  387

seq1  ATCTCTGGTGCACCTGCCATAGCCAGCACTGAATGCTGGATTGGAATACA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGGTGCACCTGCCATAGCCAGCACTGAATGCTGGATTGGAATACA  437

seq1  CTGCCACACTTTTAGACCAGGAAATCCAGGAGTGTGATGAGTTTGCTTTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCACACTTTTAGACCAGGAAATCCAGGAGTGTGATGAGTTTGCTTTA  487

seq1  GGAGGCTAGATCCAGATCTGAAATTTAAAAGACCCAGGGGGAATGTGCCC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCTAGATCCAGATCTGAAATTTAAAAGACCCAGGGGGAATGTGCCC  537

seq1  TTCCCCAGCCTTGAATAGGCTAAACAAACCTCCAGTGGTTTTACAACCTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAGCCTTGAATAGGCTAAACAAACCTCCAGTGGTTTTACAACCTG  587

seq1  GCTGGAGGCTGCCCTTGGCCTTGCTGCATTTGCAACTTCCAACTTTGAGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGGCTGCCCTTGGCCTTGCTGCATTTGCAACTTCCAACTTTGAGT  637

seq1  TTTGAGCTTTGAGGAGTTGATTACCTGCTGAGCTTGCTTTGCAACTCAAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGCTTTGAGGAGTTGATTACCTGCTGAGCTTGCTTTGCAACTCAAT  687

seq1  CCAGCTGAAACAAAAGGATGTGTCTTTGGGGTTTGCCTATATAAACACAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGAAACAAAAGGATGTGTCTTTGGGGTTTGCCTATATAAACACAA  737

seq1  AGCTGAATATTAAACTTTGAGCCCTCCTCAGACATCTCTGTCTTGGCTTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAATATTAAACTTTGAGCCCTCCTCAGACATCTCTGTCTTGGCTTC  787

seq1  ATTCTTCTCTCACCTGCCTGTCCTTTTTCATTCCCATCCTCCCTTTCAGG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCTCTCACCTGCCTGTCCTTTTTCATTCCCATCCTCCCTTTCAGG  837

seq1  TGTACTCAGTTCTCTGTGGCTGCTGGACAGATATAACTGGTGTCCAATGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTCAGTTCTCTGTGGCTGCTGGACAGATATAACTGGTGTCCAATGT  887

seq1  GTGGTTGAACAAGGTTGTGGGGAGGTCAACTGAGGAGCCCTGTCTTTGGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTGAACAAGGTTGTGGGGAGGTCAACTGAGGAGCCCTGTCTTTGGT  937

seq1  GAATCCACAGAAAATGGAAGAAGTTACAGTAAACAACGTACAGCATTGAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCACAGAAAATGGAAGAAGTTACAGTAAACAACGTACAGCATTGAT  987

seq1  ACTAGTACTAGGTATAAATTTCTTCTTTTGGAGGCGTTGTTGGAGGTGCA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTACTAGGTATAAATTTCTTCTTTTGGAGGCGTTGTTGGAGGTGCA  1037

seq1  AAAAGTCTATGGACTAGGGTAAGTTGGTGTAGACCCAGTGCTGAATTCAC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTCTATGGACTAGGGTAAGTTGGTGTAGACCCAGTGCTGAATTCAC  1087

seq1  CTAGGGGTGTAACAGTGGGTTGGGATGAGGGAATTC  1133
      ||||||||||||||||||||||||||||||||||||
seq2  CTAGGGGTGTAACAGTGGGTTGGGATGAGGGAATTC  1123