BAC Information

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BAC

Clone NameB6Ng01-135B05
Chromosome13 (Build37)
Map Location 84,216,121 - 84,217,166
singlet/doubletsinglet
Overlap genenone
Upstream geneMef2c, LOC100043111, LOC623241, LOC432789, 2810049E08Rik, LOC100043119, LOC667081
Downstream geneLOC667101, Tmem161b, LOC666795, LOC667111, LOC382786, LOC100042841, LOC100042851
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-135B05.bB6Ng01-135B05.g
ACCDH935210DH935211
length1,0381,304
definitionDH935210|Mus musculus domesticus DNA, BAC clone: B6Ng01-135B05, 5' end.DH935211|Mus musculus domesticus DNA, BAC clone: B6Ng01-135B05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactgagggaggagggtaagtacaaggttgcagttgtctgagtga
ttgcagggtcctgaggtaatcaaatttggagcttcttcatttgtttgtag
gagatgcccttcatttgtcagagttccaggatctacacttaactggcagt
gatgagtgattatcagatagccagagcaggtggaatagatggggctagca
ttccaaataaaacataactgaatacactgtttacatttggggtaagattc
tatgggtaacatttccctgctagccatagaatcttaacatttcctttatg
ggtcatgcatagattgttgcaatataaacatcccttctgttattaaaatg
gacccaaatgaatctagttaagtgtaagataaaagagaccattggatctg
ccttaccctaataccattgtctaaggtcttttattttaggaacatatatt
gtatatgaagcagacaccatttaaggcactgaatttgtaagagcaaagat
agactatgtcacagtggcaggtaaaataccaacccccaaagatgttggta
gtggtttgaacaagaaatgtcccttatagtcttagacatttaaacacttg
ctccccaattggtggggcttttggggtatgttcaagtgatgcagtctcac
tggagaaattaaaccactaagtgggtgggcttagaccaaaactaaacaac
aacaacaacaacaacaacaagctcattccatttccagttcactctcattg
cttggtgcttatggtgaagggtatgatctcccagtatttatgttctggct
gactcctgcctgatgctagcagtcacactttcctgttagaattgaccaaa
agttctacctgcaaccataagcccaaataaactcttccatctatacattg
tcttggtcatggtgctttatcacagcaagaaaaaagtaactctagaaatc
ccaagtcccacctattacagaatctagatgggttactatatggtgaagaa
agcttgcagaggcaggggataccctcaggtagggagat
gaattccaacaggaactacaggggcaagtttcatgaacagaatataagag
atagaagagagaatctcaggtgttgaagatatgacaaatgaagtggatac
acaggtcaaagaaaatgttaaatccaaaaaaactcctgaaacaaagcagc
caggaaacttgcaacactctgaaaagatcaaacctaagaataataggaat
agagggaggagaagaataccagctcaaaagtccagaaaatgtttatcaca
aaattatagtagaaattctcctaacctaatgttgatatctaatagagata
taagaagcataaaataccaaacagattggatcagaaaagaaagtcacctt
gaggcagggaatggtagcacagacctctaatcccagcacttgggaaggca
ggcaaatctccgacctacaaaaccaataccaggacagctaggactgttac
acagagaagccttatctggggggcagggaatagtctctttgccacataat
aatcaaacatactacaagaatattaataactgcaagggaaaaagatcaag
taacatataaaggaagaccaattagaaaggagactctaaaagccagaaag
tcctagacagatatgctacagactagaagagaccacagatgccagcccag
actattataccctgcaaaaatttcagtcaccattgaaggaaaaataagat
attccatgacaaatccaaatttaaacactatatatctacaaatccacccc
tacagagagtgctagaaggaaaactccaaactaaagttaactatacccat
gaaaacacagggaataaacaccagcaaaatcaaaagagaagcatacggaa
gcatagacacaaatacacacacacacacacacacacacacacacacacac
gggcacacaaacaccgccaccaggaaaaaaaaggaaccaagaaccaaaga
tcaatgatatctttcagtattaatagtcctcaattccccagtacaaagac
acagactaacaaaatggaaggtgaaaacaggatccatccttctactgcat
ccaagaaacacactcaacatcaatgacagaaaattacctcagggtaaggg
gcttagaaaaaaaatttctagccaatgttcctaagcagcaagggggagta
gctatttggaattcctttcaaaccgacttcaaacaattccaaacggagga
attgggtaaggaccctccttctctttaggaaaacctccaaaggaacttaa
atctttgcgtactagctccctcacacacagaggacctcctcatcttggtg
ttag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_84216121_84217166
seq2: B6Ng01-135B05.b_45_1082

seq1  GAATTCACTGAGGGAGGAGGGTAAGTACAAGGTTGCAGTTGTCTGAGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGAGGGAGGAGGGTAAGTACAAGGTTGCAGTTGTCTGAGTGA  50

seq1  TTGCAGGGTCCTGAGGTAATCAAATTTGGAGCTTCTTCATTTGTTTGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGGGTCCTGAGGTAATCAAATTTGGAGCTTCTTCATTTGTTTGTAG  100

seq1  GAGATGCCCTTCATTTGTCAGAGTTCCAGGATCTACACTTAACTGGCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGCCCTTCATTTGTCAGAGTTCCAGGATCTACACTTAACTGGCAGT  150

seq1  GATGAGTGATTATCAGATAGCCAGAGCAGGTGGAATAGATGGGGCTAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGTGATTATCAGATAGCCAGAGCAGGTGGAATAGATGGGGCTAGCA  200

seq1  TTCCAAATAAAACATAACTGAATACACTGTTTACATTTGGGGTAAGATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAATAAAACATAACTGAATACACTGTTTACATTTGGGGTAAGATTC  250

seq1  TATGGGTAACATTTCCCTGCTAGCCATAGAATCTTAACATTTCCTTTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGTAACATTTCCCTGCTAGCCATAGAATCTTAACATTTCCTTTATG  300

seq1  GGTCATGCATAGATTGTTGCAATATAAACATCCCTTCTGTTATTAAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATGCATAGATTGTTGCAATATAAACATCCCTTCTGTTATTAAAATG  350

seq1  GACCCAAATGAATCTAGTTAAGTGTAAGATAAAAGAGACCATTGGATCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAAATGAATCTAGTTAAGTGTAAGATAAAAGAGACCATTGGATCTG  400

seq1  CCTTACCCTAATACCATTGTCTAAGGTCTTTTATTTTAGGAACATATATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACCCTAATACCATTGTCTAAGGTCTTTTATTTTAGGAACATATATT  450

seq1  GTATATGAAGCAGACACCATTTAAGGCACTGAATTTGTAAGAGCAAAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATGAAGCAGACACCATTTAAGGCACTGAATTTGTAAGAGCAAAGAT  500

seq1  AGACTATGTCACAGTGGCAGGTAAAATACCAACCCCCAAAGATGTTGGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTATGTCACAGTGGCAGGTAAAATACCAACCCCCAAAGATGTTGGTA  550

seq1  GTGGTTTGAACAAGAAATGTCCCTTATAGTCTTAGACATTTAAACACTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTTGAACAAGAAATGTCCCTTATAGTCTTAGACATTTAAACACTTG  600

seq1  CTCCCCAATTGGTGGGGCTTTTGGGGTATGTTCAAGTGATGCAGTCTCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCAATTGGTGGGGCTTTTGGGGTATGTTCAAGTGATGCAGTCTCAC  650

seq1  TGGAGAAATTAAACCACTAAGTGGGTGGGCTTAGACCAAAACTAAACAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAATTAAACCACTAAGTGGGTGGGCTTAGACCAAAACTAAACAAC  700

seq1  AACAACAACAACAACAACAAGCTCATTCCATTTCCAGTTCACTCTCATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAACAACAACAACAAGCTCATTCCATTTCCAGTTCACTCTCATTG  750

seq1  CTTGGTGCTTATGGTGAAGGGTATGATCTCCCAGTATTTATGTTCTGGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTGCTTATGGTGAAGGGTATGATCTCCCAGTATTTATGTTCTGGCT  800

seq1  GACTCCTGCCTGATGCTAGCAGTCACACTTTCCTGTTAGAATTGACCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCTGCCTGATGCTAGCAGTCACACTTTCCTGTTAGAATTGACCAAA  850

seq1  AGTTCTACCTGCAACCATAAGCCCAAATAAACTCTTCCATCTATACATTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTACCTGCAACCATAAGCCCAAATAAACTCTTCCATCTATACATTG  900

seq1  TCTTGGTCATGGTGCTTTATCACAGCAAGAAAAAAGTAACTCTAGAAATC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTCATGGTGCTTTATCACAGCAAGAAAAAAGTAACTCTAGAAATC  950

seq1  CCAAGTCCCACCTATTACAGAATCTAAGAATGGGTTAACTAATATGGTGA  1000
      ||||||||||||||||||||||||||   ||||||| ||| |||||||||
seq2  CCAAGTCCCACCTATTACAGAATCTA--GATGGGTT-ACT-ATATGGTGA  996

seq1  AGAGAGCTTTGCAGAAGCAAGGGGATAACTCTCAGGTTAGGGAGAT  1046
      ||| ||| ||||||| || ||||||| || |||||| |||||||||
seq2  AGAAAGC-TTGCAGAGGC-AGGGGAT-ACCCTCAGG-TAGGGAGAT  1038