BAC Information

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BAC

Clone NameB6Ng01-136D13
Chromosome13 (Build37)
Map Location 51,431,428 - 51,594,265
singlet/doubletdoublet
Overlap genePpia-ps13_636.1, LOC625524, Edg3, Shc3
Upstream geneLOC667625, LOC667632, EG667637, Fbxw17, Gm806, EG639044, Gm904, LOC100040315, EG667693, LOC100040161, LOC100040190, EG667712, LOC676997, EG667717, Spin1, 4930519N16Rik, EG667728, LOC667733
Downstream geneCks2, Secisbp2, Sema4d, Gadd45g, LOC100040321
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136D13.bB6Ng01-136D13.g
ACCDH936053DH936054
length1,1041,110
definitionDH936053|Mus musculus domesticus DNA, BAC clone: B6Ng01-136D13, 5' end.DH936054|Mus musculus domesticus DNA, BAC clone: B6Ng01-136D13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,593,156 - 51,594,265)(51,431,428 - 51,432,552)
sequence
gaattctcagataatactgtagtttcttttcctgtagcagtgatgagaca
ctctgctacaagctacttaaggagaatcggtttaggttggctcataattc
caggtgacagtaagtcatagcagggaagacacagaggtgggaggtcgagg
aacctggtcacatggcatccacaatcagaaacagggagcagtgagtccat
gcatactagacctggctgtccttcttcacttacaaggtgcaggttccact
tacacttaagttagaccttttcacattgataacataatcaagacaaatcc
atcccagaattctcggatgctagctgtaatgtagccaatccctcacctag
agacctgcctcctaaacgttaagcaatcgacatgactccacatgactcca
cagtgcagcacgtggtaacatcttaaatttcaaggctttatttaatgaca
caaaataaagtcaagagaaagcaattggctaagagaccggaagactgaat
attacattaaattatttccatttttattctgcctcaaggtcaacttacca
atgacaatgaatgagaccactcaagtttggcagaaaactcaccttttggt
attttggtagaatgcactttctctctcaagtttttttgccaactccttcc
taccaactttgaagaaagagaagattttgagagctattttgaaggaaaat
ctttgcactctgaaaattttatttattagtcaatttgtaatttcctgtaa
cttagttaaatgcactttgatacttaaagctatgatctgagtgagaaaca
ggatgttgaacagtgatcctgagcctgccttcctctctggggagatgatg
tgtgccttttgctattttaagaacattcatttattcattcatgaccttgc
acacattaaggtaggaactctaccactgaggtctattgtgagcctcagtc
cccagactgactgctggggcccagagatgacctctgtgtttgcaatggaa
cattcttccacccaaggcaccaccactgatgggcttggactgacagctgc
ctgaaaatagttcctgtagaggtggtgtgagcatgacatatgctcttacc
atcc
gaattcctctgcagaagtaatcagagagagagccaggatggttcattggg
taagagcatttgttcccccgacgtccaaggacctgagttcaaatctgcaa
gctaagaatagccacagttgtgcctgggaccctcgtactcttctgggggg
aagaagaaacagtaagatggctagggcttcttagctgccgaccgggttcc
aagctcagtgaacgagtctgtgagtctgtgagggaatgaggcagagcgag
agtaggaagcccagtgtcttccttcagcctctgtggatccatgtgcacac
cccctcccatatatacacattcatggaggaatcatcaatgagaaagccca
gttattgcctgtccgctgatggaaagggttacctggggtagcagctgaga
cttatcctagccaggaatttcccttacagaaaacaagatcaggatgcatt
ttagatgccagactgctgcttggacagacacaactacctggaatcgcccg
tgcaatagcacttcccagaaaacccacagggactcacttgaacctcttct
gaaggccatgggtcctgcccttcggaattcagctttctttacagtgacag
ggaaaaacaatcttatttttaattttcctaaataagtggaggcatgtctc
atcttcctccacagtctgagactctggacccctcaccttttcatatttcc
tcggatgactttgctagtgaactttggaaggaacgagcctaaggatctct
cccacaaaccgtggagatttcccatggaaagccagtccccactcaagtgt
atttggctcctgtatctgtaaagtatttttgcttgtctctgagggagcaa
tgcacatccagggccctgggacccacagctgctgcaaggaagccacagca
catttcacaaggcatccttcctgcccatggtccctgaggaagcaattctg
agacgctgttttctttttccagaaaggagagctcagccgtgcttcagcta
ggaaagctgtcagttttctgcctgtatgccccagactcagaccaccatcc
attctcctcaggaactacagcttctagcaccaattggttcttcatcacgc
agcattcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_51593156_51594265
seq2: B6Ng01-136D13.b_48_1151 (reverse)

seq1  GGATGGTAAGAGCAATATGTCATGCCTCACACCACCTCTACAGTGAACCT  50
      ||||||||||||| |||||||||| |||||||||||||||||| ||||  
seq2  GGATGGTAAGAGC-ATATGTCATG-CTCACACCACCTCTACAG-GAACTA  47

seq1  ATCTCAGGCAGCTGTTCAGTCCAAGCCCATCAGTGGTGGTGGCCTTGGGT  100
       | ||||||||||| ||||||||||||||||||||||||| |||||||||
seq2  TTTTCAGGCAGCTG-TCAGTCCAAGCCCATCAGTGGTGGT-GCCTTGGGT  95

seq1  GGGAAGAATGTTCCATTGCAAACACAGAGGTCATCTCTGGGCCCCAGCAG  150
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -GGAAGAATGTTCCATTGCAAACACAGAGGTCATCTCTGGGCCCCAGCAG  144

seq1  TCAGTCTGGGGACCTGAGGCTCACAATAGACCTCAGTGGTAGAGTTCCTA  200
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTGGGGA-CTGAGGCTCACAATAGACCTCAGTGGTAGAGTTCCTA  193

seq1  CC-TAATGTGTGCAAGGTCATGAATGAATAAATGAATGTTCTTAAAATAG  249
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAATGTGTGCAAGGTCATGAATGAATAAATGAATGTTCTTAAAATAG  243

seq1  CAAAAGGCACACATCATCTCCCCAGAGAGGAAGGCAGGCTCAGGATCACT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGCACACATCATCTCCCCAGAGAGGAAGGCAGGCTCAGGATCACT  293

seq1  GTTCAACATCCTGTTTCTCACTCAGATCATAGCTTTAAGTATCAAAGTGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAACATCCTGTTTCTCACTCAGATCATAGCTTTAAGTATCAAAGTGC  343

seq1  ATTTAACTAAGTTACAGGAAATTACAAATTGACTAATAAATAAAATTTTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAACTAAGTTACAGGAAATTACAAATTGACTAATAAATAAAATTTTC  393

seq1  AGAGTGCAAAGATTTTCCTTCAAAATAGCTCTCAAAATCTTCTCTTTCTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGCAAAGATTTTCCTTCAAAATAGCTCTCAAAATCTTCTCTTTCTT  443

seq1  CAAAGTTGGTAGGAAGGAGTTGGCAAAAAAACTTGAGAGAGAAAGTGCAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTGGTAGGAAGGAGTTGGCAAAAAAACTTGAGAGAGAAAGTGCAT  493

seq1  TCTACCAAAATACCAAAAGGTGAGTTTTCTGCCAAACTTGAGTGGTCTCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCAAAATACCAAAAGGTGAGTTTTCTGCCAAACTTGAGTGGTCTCA  543

seq1  TTCATTGTCATTGGTAAGTTGACCTTGAGGCAGAATAAAAATGGAAATAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTGTCATTGGTAAGTTGACCTTGAGGCAGAATAAAAATGGAAATAA  593

seq1  TTTAATGTAATATTCAGTCTTCCGGTCTCTTAGCCAATTGCTTTCTCTTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGTAATATTCAGTCTTCCGGTCTCTTAGCCAATTGCTTTCTCTTG  643

seq1  ACTTTATTTTGTGTCATTAAATAAAGCCTTGAAATTTAAGATGTTACCAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATTTTGTGTCATTAAATAAAGCCTTGAAATTTAAGATGTTACCAC  693

seq1  GTGCTGCACTGTGGAGTCATGTGGAGTCATGTCGATTGCTTAACGTTTAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGCACTGTGGAGTCATGTGGAGTCATGTCGATTGCTTAACGTTTAG  743

seq1  GAGGCAGGTCTCTAGGTGAGGGATTGGCTACATTACAGCTAGCATCCGAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGGTCTCTAGGTGAGGGATTGGCTACATTACAGCTAGCATCCGAG  793

seq1  AATTCTGGGATGGATTTGTCTTGATTATGTTATCAATGTGAAAAGGTCTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGGGATGGATTTGTCTTGATTATGTTATCAATGTGAAAAGGTCTA  843

seq1  ACTTAAGTGTAAGTGGAACCTGCACCTTGTAAGTGAAGAAGGACAGCCAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAGTGTAAGTGGAACCTGCACCTTGTAAGTGAAGAAGGACAGCCAG  893

seq1  GTCTAGTATGCATGGACTCACTGCTCCCTGTTTCTGATTGTGGATGCCAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGTATGCATGGACTCACTGCTCCCTGTTTCTGATTGTGGATGCCAT  943

seq1  GTGACCAGGTTCCTCGACCTCCCACCTCTGTGTCTTCCCTGCTATGACTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCAGGTTCCTCGACCTCCCACCTCTGTGTCTTCCCTGCTATGACTT  993

seq1  ACTGTCACCTGGAATTATGAGCCAACCTAAACCGATTCTCCTTAAGTAGC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCACCTGGAATTATGAGCCAACCTAAACCGATTCTCCTTAAGTAGC  1043

seq1  TTGTAGCAGAGTGTCTCATCACTGCTACAGGAAAAGAAACTACAGTATTA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGCAGAGTGTCTCATCACTGCTACAGGAAAAGAAACTACAGTATTA  1093

seq1  TCTGAGAATTC  1110
      |||||||||||
seq2  TCTGAGAATTC  1104

seq1: chr13_51431428_51432552
seq2: B6Ng01-136D13.g_68_1177

seq1  GAATTCCTCTGCAGAAGTAATCAGAGAGAGAGCCAGGATGGTTCATTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTGCAGAAGTAATCAGAGAGAGAGCCAGGATGGTTCATTGGG  50

seq1  TAAGAGCATTTGTTCCCCCGACGTCCAAGGACCTGAGTTCAAATCTGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGCATTTGTTCCCCCGACGTCCAAGGACCTGAGTTCAAATCTGCAA  100

seq1  GCTAAGAATAGCCACAGTTGTGCCTGGGACCCTCGTACTCTTCTGGGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGAATAGCCACAGTTGTGCCTGGGACCCTCGTACTCTTCTGGGGGG  150

seq1  AAGAAGAAACAGTAAGATGGCTAGGGCTTCTTAGCTGCCGACCGGGTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAAACAGTAAGATGGCTAGGGCTTCTTAGCTGCCGACCGGGTTCC  200

seq1  AAGCTCAGTGAACGAGTCTGTGAGTCTGTGAGGGAATGAGGCAGAGCGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCAGTGAACGAGTCTGTGAGTCTGTGAGGGAATGAGGCAGAGCGAG  250

seq1  AGTAGGAAGCCCAGTGTCTTCCTTCAGCCTCTGTGGATCCATGTGCACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGGAAGCCCAGTGTCTTCCTTCAGCCTCTGTGGATCCATGTGCACAC  300

seq1  CCCCTCCCATATATACACATTCATGGAGGAATCATCAATGAGAAAGCCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCCATATATACACATTCATGGAGGAATCATCAATGAGAAAGCCCA  350

seq1  GTTATTGCCTGTCCGCTGATGGAAAGGGTTACCTGGGGTAGCAGCTGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTGCCTGTCCGCTGATGGAAAGGGTTACCTGGGGTAGCAGCTGAGA  400

seq1  CTTATCCTAGCCAGGAATTTCCCTTACAGAAAACAAGATCAGGATGCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCCTAGCCAGGAATTTCCCTTACAGAAAACAAGATCAGGATGCATT  450

seq1  TTAGATGCCAGACTGCTGCTTGGACAGACACAACTACCTGGAATCGCCCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATGCCAGACTGCTGCTTGGACAGACACAACTACCTGGAATCGCCCG  500

seq1  TGCAATAGCACTTCCCAGAAAACCCACAGGGACTCACTTGAACCTCTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATAGCACTTCCCAGAAAACCCACAGGGACTCACTTGAACCTCTTCT  550

seq1  GAAGGCCATGGGTCCTGCCCTTCGGAATTCAGCTTTCTTTACAGTGACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCCATGGGTCCTGCCCTTCGGAATTCAGCTTTCTTTACAGTGACAG  600

seq1  GGAAAAACAATCTTATTTTTAATTTTCCTAAATAAGTGGAGGCATGTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAACAATCTTATTTTTAATTTTCCTAAATAAGTGGAGGCATGTCTC  650

seq1  ATCTTCCTCCACAGTCTGAGACTCTGGACCCCTCACCTTTTCATATTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCCTCCACAGTCTGAGACTCTGGACCCCTCACCTTTTCATATTTCC  700

seq1  TCGGATGACTTTGCTAGTGAACTTTGGAAGGAACGAGCCTAAGGATCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGATGACTTTGCTAGTGAACTTTGGAAGGAACGAGCCTAAGGATCTCT  750

seq1  CCCACAAACCGTGGAGATTTCCCATGGAAAGCCAGTCCCCACTCAAGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAAACCGTGGAGATTTCCCATGGAAAGCCAGTCCCCACTCAAGTGT  800

seq1  ATTTGGCTCCTGTATCTGTAAAGTATTTTTGCTTGTCTCTGAGGGAGCAA  850
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATTTGGCTCCTGTATCTGTAAAGTATTTTTGCTTGTCTCTGAGGGAGC-A  849

seq1  ATGCACATCCAGGGCCCTGGGACCCACAGCTGCTGCAAGGAAGCCACAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACATCCAGGGCCCTGGGACCCACAGCTGCTGCAAGGAAGCCACAGC  899

seq1  ACATTTCACAAAGGCATCCTTCCTGCCCATGGTCCCCTGAGGAAGCAATT  950
      ||||||||| ||||||||||||||||||||||| ||||||||||||||||
seq2  ACATTTCAC-AAGGCATCCTTCCTGCCCATGGT-CCCTGAGGAAGCAATT  947

seq1  CTGAGACGCTGTTTCTTTTTCCCAGAAAGAAGAGCCCAGCCGTGCCTCAG  1000
      ||||||||||||||  |||| |||||||| ||||| ||||||||| ||||
seq2  CTGAGACGCTGTTTTCTTTTTCCAGAAAGGAGAGCTCAGCCGTGCTTCAG  997

seq1  CTAGGAAAGGCTGTCAGTTTTCTGCCTGTATGCCCCAGGACTCAGGACCA  1050
      |||||||| |||||||||||||||||||||||||||| |||||| |||||
seq2  CTAGGAAA-GCTGTCAGTTTTCTGCCTGTATGCCCCA-GACTCA-GACCA  1044

seq1  CCATCCA-TCTCCCCAGGAACTACCAGCCTTCTAAGCACACAATGGGTTC  1099
      ||||||| ||||| ||||||||| ||| ||||| ||||| |||| |||| 
seq2  CCATCCATTCTCCTCAGGAACTA-CAG-CTTCT-AGCAC-CAATTGGTT-  1089

seq1  CTTCCAACCACGCAGCATCTCTCTTC  1125
      ||||  | ||||||||||   |||||
seq2  CTTC--ATCACGCAGCAT---TCTTC  1110