BAC Information

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BAC

Clone NameB6Ng01-137C12
Chromosome14 (Build37)13 (Build37)
Map Location 73,484,653 - 73,484,69260,423,563 - 60,424,751
singlet/doubletsingletsinglet
Overlap geneLOC100043149
Upstream geneLOC668482, LOC675957, Fndc3a, LOC100043721, LOC100043723, LOC668487, LOC668489, Cysltr2
Downstream geneRcbtb2, Rb1, P2ry5, Itm2b, LOC100043152, Med4, Nudt15, Sucla2, LOC100043734, EG629578
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137C12.bB6Ng01-137C12.g
ACCDH936745DH936746
length1431,181
definitionDH936745|Mus musculus domesticus DNA, BAC clone: B6Ng01-137C12, 5' end.DH936746|Mus musculus domesticus DNA, BAC clone: B6Ng01-137C12, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(73,484,653 - 73,484,692)(60,423,563 - 60,424,751)
sequence
aatgcctgtcttcttcttcttcttcttcttcttcttcttcttcttcttct
tcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttc
ttcttcttcttcctcttcctcttcctcttccttttctttttct
gaattccactagacccatggctcctaacgagagctccctgaagcggcttc
agcagcagccagagccatgttagaaatgaagagtctcaggcccttcccaa
actgggtgtgggccccaggacctgccatctccagtggagtgagtgcagcc
tcactcctgcctggacacacattgctgtgtgaaaaccactatgggcagta
ctgtctttcagcattttaattaagaagcatttcatacatgaaagcgaaaa
caaaagaccatatagcaaacagctgagcccaaatgtccatttagaaaaat
ctttatacggactcacttgttttaaacatttattgcaaacacggttggag
cttacttgtctgactccactctcttcccattttttctggagaagttactg
taactgcttcgctgctcacagctcagctgcagaggacttgtataaatcta
tatctccactaacaagacatgaaaacctatccatcagccacttccaatat
tacctcatcccccaaaagacactttaggttccatcttgatgagccctgca
tgtataaatcaaatgaaaacagctgcccttaaattgctcacaggatggga
aattctagagaagatctttatgggctgtagaggagacgaaggcttctgga
aaggtcactgggctgagcggtgccagatgactactcagggaacagagctc
attcaacatgccaggctgggtgtgcacaggcaggaccatggagccttcct
gtccttcagctggttcaatgctacacacttctctttccggctcagcctgc
cccttccccaatcaagtattttgctcctctctgaatatacatatcatatt
ttggggatgtgaacccctaagcatacatgcttggagatttttttcagccc
tggcttgaagaatactgagatgagttagctgtattgtccatagtgatttc
agttcctggaaggctgggatacagacgaactgtgctgcactgggctcatg
agctgagcaccacaactattccgcactccttgatgggtagtttggttgta
ggagccaccagtgtgtatgggcaattcagagacagttgattaaacctgat
acagaaccccagcaactttctcatagtctgcctatccgagcgtgaacgtt
cctgataggaacttcctcacgtaggcccacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_73484653_73484692
seq2: B6Ng01-137C12.b_151_193 (reverse)

seq1  AGAAGAAGAA---GAAGAAGAAGAGGAAGAGGAAGAAGAAGAA  40
      |||| |||||   ||||| ||||||||||||||||||||||||
seq2  AGAAAAAGAAAAGGAAGAGGAAGAGGAAGAGGAAGAAGAAGAA  43

seq1: chr13_60423563_60424751
seq2: B6Ng01-137C12.g_69_1249

seq1  GAATTCCACTAGACCCATGGCTCCTAACGAGAGCTCCCTGAAGCGGCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTAGACCCATGGCTCCTAACGAGAGCTCCCTGAAGCGGCTTC  50

seq1  AGCAGCAGCCAGAGCCATGTTAGAAATGAAGAGTCTCAGGCCCTTCCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCAGCCAGAGCCATGTTAGAAATGAAGAGTCTCAGGCCCTTCCCAA  100

seq1  ACTGGGTGTGGGCCCCAGGACCTGCCATCTCCAGTGGAGTGAGTGCAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGTGTGGGCCCCAGGACCTGCCATCTCCAGTGGAGTGAGTGCAGCC  150

seq1  TCACTCCTGCCTGGACACACATTGCTGTGTGAAAACCACTATGGGCAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCCTGCCTGGACACACATTGCTGTGTGAAAACCACTATGGGCAGTA  200

seq1  CTGTCTTTCAGCATTTTAATTAAGAAGCATTTCATACATGAAAGCGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTTCAGCATTTTAATTAAGAAGCATTTCATACATGAAAGCGAAAA  250

seq1  CAAAAGACCATATAGCAAACAGCTGAGCCCAAATGTCCATTTAGAAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGACCATATAGCAAACAGCTGAGCCCAAATGTCCATTTAGAAAAAT  300

seq1  CTTTATACGGACTCACTTGTTTTAAACATTTATTGCAAACACGGTTGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATACGGACTCACTTGTTTTAAACATTTATTGCAAACACGGTTGGAG  350

seq1  CTTACTTGTCTGACTCCACTCTCTTCCCATTTTTTCTGGAGAAGTTACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTGTCTGACTCCACTCTCTTCCCATTTTTTCTGGAGAAGTTACTG  400

seq1  TAACTGCTTCGCTGCTCACAGCTCAGCTGCAGAGGACTTGTATAAATCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGCTTCGCTGCTCACAGCTCAGCTGCAGAGGACTTGTATAAATCTA  450

seq1  TATCTCCACTAACAAGACATGAAAACCTATCCATCAGCCACTTCCAATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCCACTAACAAGACATGAAAACCTATCCATCAGCCACTTCCAATAT  500

seq1  TACCTCATCCCCCAAAAGACACTTTAGGTTCCATCTTGATGAGCCCTGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCATCCCCCAAAAGACACTTTAGGTTCCATCTTGATGAGCCCTGCA  550

seq1  TGTATAAATCAAATGAAAACAGCTGCCCTTAAATTGCTCACAGGATGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAAATCAAATGAAAACAGCTGCCCTTAAATTGCTCACAGGATGGGA  600

seq1  AATTCTAGAGAAGATCTTTATGGGCTGTAGAGGAGACGAAGGCTTCTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTAGAGAAGATCTTTATGGGCTGTAGAGGAGACGAAGGCTTCTGGA  650

seq1  AAGGTCACTGGGCTGAGCGGTGCCAGATGACTACTCAGGGAACAGAGCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCACTGGGCTGAGCGGTGCCAGATGACTACTCAGGGAACAGAGCTC  700

seq1  ATTCAACATGCCAGGCTGGGTGTGCACAGGCAGGACCATGGAGCCTTCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAACATGCCAGGCTGGGTGTGCACAGGCAGGACCATGGAGCCTTCCT  750

seq1  GTCCTTCAGCTGGTTCAATGCTACACACTTCTCTTTCCGGCTCAGCCTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTCAGCTGGTTCAATGCTACACACTTCTCTTTCCGGCTCAGCCTGC  800

seq1  CCCTTCCCCAATCAAGTATTTTGCTCCTCTCTGAATATACATATCATATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCCCCAATCAAGTATTTTGCTCCTCTCTGAATATACATATCATATT  850

seq1  TTGGGGATGTGAACCCCTAAGCATACATGCTTGGAGATTTTTTTCAGCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGATGTGAACCCCTAAGCATACATGCTTGGAGATTTTTTTCAGCCC  900

seq1  TGGCTTGAAGAATACTGAGATGAGTTAGCTGTATTGTCCATAGTGATTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGAAGAATACTGAGATGAGTTAGCTGTATTGTCCATAGTGATTTC  950

seq1  AGTTCCTGGAAGGCTGGGATACAGACAGAACTGTGCTTGCACTGGGCTCA  1000
      |||||||||||||||||||||||||| ||||||||| |||||||||||||
seq2  AGTTCCTGGAAGGCTGGGATACAGAC-GAACTGTGC-TGCACTGGGCTCA  998

seq1  TGAGCTGAGCACCACAACTATCCCGCACTCCTTTGATGGGTAGTTTGGTG  1050
      ||||||||||||||||||||| ||||||||| ||||||||||||||||| 
seq2  TGAGCTGAGCACCACAACTATTCCGCACTCC-TTGATGGGTAGTTTGGTT  1047

seq1  TTAGGAG-CACCAGTGTGTATGGGCCAAT-ACAGACAGTTGATTATAACT  1098
       |||||| ||||||||||||||||| | | | ||||||||||||| | ||
seq2  GTAGGAGCCACCAGTGTGTATGGGCAATTCAGAGACAGTTGATTAAACCT  1097

seq1  GATACAGGACCCCAGCAGCTTTCTCCATAGTTCTGCGCTATCAGAGCAGT  1148
      ||||||| ||||||||| |||||| ||||| ||||| ||||| |||| ||
seq2  GATACAGAACCCCAGCAACTTTCT-CATAG-TCTGC-CTATCCGAGC-GT  1143

seq1  GAAACATTCCTGAGTTAGGAACATCCTTCAGTAAGCCCACC  1189
      | ||| |||||||  ||||||| ||||   ||| |||||||
seq2  G-AACGTTCCTGA--TAGGAACTTCCTCACGTAGGCCCACC  1181