BAC Information

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BAC

Clone NameB6Ng01-140H19
Chromosome13 (Build37)
Map Location 115,285,691 - 115,286,251
singlet/doubletsinglet
Overlap genenone
Upstream geneSnag1, Hspb3, EG632832, LOC622701, LOC100040927, Arl15, A430090L17Rik, Ndufs4, LOC100040958, Fst
Downstream gene4930467J12Rik, Mocs2, Itga2, LOC100040975, Itga1, Pelo, LOC100041023
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140H19.bB6Ng01-140H19.g
ACCDH939205DH939206
length1,233818
definitionDH939205|Mus musculus domesticus DNA, BAC clone: B6Ng01-140H19, 5' end.DH939206|Mus musculus domesticus DNA, BAC clone: B6Ng01-140H19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacataataaaagcagtatacagcaaacta
gtagccaacatcaaactaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaaactgcccactttcttcctacctatctaatatag
tacttgaagtcctagccagagcaattagacaacaaaaggagatcaagggg
atacaaattggaaaggaagaagtcaaaatatcactatttgcagatgatat
gatagtatatataagtgaccccaaaagttccaccagagaactcctaaacc
tgataaacagcttcagtgagtagctggatataaaattaactcaaacaagt
caatggcctttctctacacaaagaataaacaggctgagaaagaaattagg
gaaacaacacccttctcaaaagtcacaaataatataaaataccttggcgt
gactctaactaaggaagtgaaagatctgtacgataagaacttcaagtctc
tgaagaaagaaatcgaagaagatctcagaagatggaaagatctcccatgc
tcatggattggcaggatcattatagtaaaaatggctatcttgcctaaagc
aatctatacagattcaatgcaatccccataaaaattccaactcaattctt
cactgagttagaaagggcaatttgcaaattcatctggaataacaaaaaac
ctagcatagcaaaaactcttctcaatgataaaagaacctctgatggaatc
accacgcctgacctaaagctgtactacagagcaattgtgataaaaactgc
atggtactggtacagtgacagacaggtagatcaatggaatagaattgaag
actcaaaaatgaacccacacacctatggtcacttgatctttgacagggag
ctaaaaccatccagtggaaaaaagacagcattttcaacaaatggtgctgg
cacaactggtggttatcatgtagaagaatgcaaattgatccattcttatc
tctcgtacaagctcaaatctaagtggatcagaactccacataaaacaaag
aaactgaacttatagaggagagagtaggaaaggctcaagaaattgccaca
gggcaaaactctgaacgaatagcatgctgtctgtagatcaagaatggaca
atggaactctgatgcaagctctagcagaacgtcatgaaacaaagcactac
gattggaaggattttttacactcctgatctacg
gaattcttcctttactttcaactatgctctactatccctcctcccctaag
gttatccacccactacatcattttccttgtttcctggaacttactgatgt
tgaactaatttggcatagcatcatactgacttctgaaactctatgtttat
accaatagacaaaaaacactctcaggcttaatccaagaagcctctatttg
tagtgaatgttggtaatctgagactagtgactgcccaagatgttacagta
agtagcagttgagggctcaggcctaaacaaggtatttgcaccacctcctt
taaggctcagaagtactgaggaaaagggagtgtggaatatgtaatgttag
aagataaagtgaagggatgtggaattaccattctctaggcttgctacaac
cattaagtgctgactaagtttatgtcaacttaacaccactagtcattttg
gaagagataatctcaactgagaaaatgcccacacaagactggcttgtagt
taagtctgtgatacattttcttgattgatgattgatgtgggagggtgatg
ctcactattcatggtgctaaccctgggttggtggtcctaggtactatgaa
aaggccataggtaaaaaaaaaaaaaaaaagccatgaagaagcacttctca
gtggcctatgtatcagttcctatctgtcgtttcctgccctgagttccctc
agtgatggactgctacctggaaatataacccaaataaagtctttcctccc
aaagcatttgtttgtttgtttgtttgttgttgtttatcacagtaaaaccc
taacctagacttattgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_115285691_115286251
seq2: B6Ng01-140H19.g_68_628 (reverse)

seq1  TGAATAGTGAGCATCACCCTCCCACATCAATCATCAATCAAGAAAATGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAGTGAGCATCACCCTCCCACATCAATCATCAATCAAGAAAATGTA  50

seq1  TCACAGACTTAACTACAAGCCAGTCTTGTGTGGGCATTTTCTCAGTTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGACTTAACTACAAGCCAGTCTTGTGTGGGCATTTTCTCAGTTGAG  100

seq1  ATTATCTCTTCCAAAATGACTAGTGGTGTTAAGTTGACATAAACTTAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTCTTCCAAAATGACTAGTGGTGTTAAGTTGACATAAACTTAGTC  150

seq1  AGCACTTAATGGTTGTAGCAAGCCTAGAGAATGGTAATTCCACATCCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTTAATGGTTGTAGCAAGCCTAGAGAATGGTAATTCCACATCCCTT  200

seq1  CACTTTATCTTCTAACATTACATATTCCACACTCCCTTTTCCTCAGTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTATCTTCTAACATTACATATTCCACACTCCCTTTTCCTCAGTACT  250

seq1  TCTGAGCCTTAAAGGAGGTGGTGCAAATACCTTGTTTAGGCCTGAGCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGCCTTAAAGGAGGTGGTGCAAATACCTTGTTTAGGCCTGAGCCCT  300

seq1  CAACTGCTACTTACTGTAACATCTTGGGCAGTCACTAGTCTCAGATTACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGCTACTTACTGTAACATCTTGGGCAGTCACTAGTCTCAGATTACC  350

seq1  AACATTCACTACAAATAGAGGCTTCTTGGATTAAGCCTGAGAGTGTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCACTACAAATAGAGGCTTCTTGGATTAAGCCTGAGAGTGTTTTT  400

seq1  TGTCTATTGGTATAAACATAGAGTTTCAGAAGTCAGTATGATGCTATGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATTGGTATAAACATAGAGTTTCAGAAGTCAGTATGATGCTATGCC  450

seq1  AAATTAGTTCAACATCAGTAAGTTCCAGGAAACAAGGAAAATGATGTAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGTTCAACATCAGTAAGTTCCAGGAAACAAGGAAAATGATGTAGT  500

seq1  GGGTGGATAACCTTAGGGGAGGAGGGATAGTAGAGCATAGTTGAAAGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGATAACCTTAGGGGAGGAGGGATAGTAGAGCATAGTTGAAAGTAA  550

seq1  AGGAAGAATTC  561
      |||||||||||
seq2  AGGAAGAATTC  561