BAC Information

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BAC

Clone NameB6Ng01-141G23
Chromosome13 (Build37)
Map Location 4,228,928 - 4,416,767
singlet/doubletdoublet
Overlap geneAkr1c19, Akr1c12
Upstream geneLOC674228, LOC667411, LOC100039182, 2810429I04Rik, Gdi2, Asb13, Calml3, Calm4, Calm5, LOC100039279, Net1, Tubal3, Ucn3, Akr1c14, Akr1c18, LOC100039262, Akr1c13
Downstream geneAkr1c6, Akr1c20, Akr1c21, Akr1e1, EG432721, EG432723
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141G23.bB6Ng01-141G23.g
ACCDH939894DH939895
length1,0351,029
definitionDH939894|Mus musculus domesticus DNA, BAC clone: B6Ng01-141G23, 5' end.DH939895|Mus musculus domesticus DNA, BAC clone: B6Ng01-141G23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(4,228,928 - 4,229,969)(4,415,730 - 4,416,767)
sequence
gaattctggggatcaatctcaggttcccagtctttcatagaaagtggctt
taccaagcaagctgcatctgcatcacaggttcaaagaaagtgttttcttt
cttttttgcagtaatgggaattgaactcagagccctgtacatactaggca
tggactatgccactgagccatgctcccagcttgtgtgtattctttgaaaa
gcctattaaactcctaacccctaaacgaaacagggactctgttgtttgat
gacaaggtactatctaagtgagctggaaactggcaagctcaaacactagg
tttaatcacttgaagagaccataattttgaaggagaaacatttttattat
agagcttatgttagaataggctgatcaaagatagggaggatagtccaagc
atgatgggagagaattgagaatggttggtgtctggcaagatgatcaagag
actggtcagtgttcagtctcaagagaaaattccctggtgaacctaaagaa
atccagaacttccccctggaagctagactacacatagcaagtaagtggcc
ccaaccctagtcggaggattgcatgagtggacaggatcacttcgcctgag
gtgctgcctgtctttctaattcatttttcctctatctgtaagactgggaa
tcaggcccatctccatctcattggatggcctctaggatgcaccctaaaga
attggggcaagctcaacccaaacattttcaaaaggaagcaacttgctttc
ttttgcaataaagcctggctctattatgagctggggtgggaagacttgtc
tttgatgggagccaaaataaataccatactacagttgttgacttgttttt
cagacaatgaacaaaaatagcaacaaggtcccttatgtttaagcctctta
tgttaattacattgccatgctcctgcttgatctactttgaaagtgaaaaa
gaaaaagggagagttttgtgttttcttgctcacattttgtatgtagcctt
aaaggaaactccaacttctgaaaagctgctcaatc
gaattcaagaatgaatgagaaatcaaccaagaaaatgttaggaaatgaag
tgaagttgacagttttgatcaaaataatttaggtaaattggctcctttca
tgttttcccagctgcatggcatgactttccatgcctgggtgctctactgt
cctgttttcgattgatgctgacaagtagaatgacactgatctctggatgg
tatatactttgtgatgtcactagcttgtttctcattttggtgactgtaag
gaatgaatacttgatggtgtatgtcgtttcttgatttttttttttttcat
tttagagattagttttaatatccagatttgtttctggaatctgcaaagtt
ttctacatataagattatgctctttgtgacaaaatataatgctttttctc
cacaatgactaactttttttttttaaacagggacagacagtgaagggatt
gctccatctcatattgctgctgataatgtttcaggttcaactagaatttc
atctccttgatggaaaaatcccctggaaaattactcaactctcttctaag
aaccttagattaagatgccccagctaattttttgttaaaatacctgcttg
ttcaaacctcgaacttaagcaaactgcttatcttaactttgtaaaatctc
ctcctgcaatggccaagtgaggtatcagggtgtggattttgctttttaaa
aaatctctttatcttaatgttcagtgctacacttgagtccaaaatatcca
agtagagtcccagatggcttaataaagacattttcaattgtatgtctgag
tgttcttttcttgtgggcatctgatagcacgttaatatattttttgttac
ctaagagttctgtctagaacacactatatcatgttgattacttgtggaaa
tatcaacatgaattcaatgtgcataatggccattgtgggttttcatccgg
tgatgttaatttcagaaaagctctgccactcctgcactctggatggtttt
attgcattagagagaagagaaattttata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_4228928_4229969
seq2: B6Ng01-141G23.b_48_1082

seq1  GAATTCTGGGGATCAATCTCAGGTTCCCAGTCTTTCATAGAAAGTGGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGGATCAATCTCAGGTTCCCAGTCTTTCATAGAAAGTGGCTT  50

seq1  TACCAAGCAAGCTGCATCTGCATCACAGGTTCAAAGAAAGTGTTTTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAGCAAGCTGCATCTGCATCACAGGTTCAAAGAAAGTGTTTTCTTT  100

seq1  CTTTTTTGCAGTAATGGGAATTGAACTCAGAGCCCTGTACATACTAGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTGCAGTAATGGGAATTGAACTCAGAGCCCTGTACATACTAGGCA  150

seq1  TGGACTATGCCACTGAGCCATGCTCCCAGCTTGTGTGTATTCTTTGAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTATGCCACTGAGCCATGCTCCCAGCTTGTGTGTATTCTTTGAAAA  200

seq1  GCCTATTAAACTCCTAACCCCTAAACGAAACAGGGACTCTGTTGTTTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATTAAACTCCTAACCCCTAAACGAAACAGGGACTCTGTTGTTTGAT  250

seq1  GACAAGGTACTATCTAAGTGAGCTGGAAACTGGCAAGCTCAAACACTAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGGTACTATCTAAGTGAGCTGGAAACTGGCAAGCTCAAACACTAGG  300

seq1  TTTAATCACTTGAAGAGACCATAATTTTGAAGGAGAAACATTTTTATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCACTTGAAGAGACCATAATTTTGAAGGAGAAACATTTTTATTAT  350

seq1  AGAGCTTATGTTAGAATAGGCTGATCAAAGATAGGGAGGATAGTCCAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTTATGTTAGAATAGGCTGATCAAAGATAGGGAGGATAGTCCAAGC  400

seq1  ATGATGGGAGAGAATTGAGAATGGTTGGTGTCTGGCAAGATGATCAAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGGAGAGAATTGAGAATGGTTGGTGTCTGGCAAGATGATCAAGAG  450

seq1  ACTGGTCAGTGTTCAGTCTCAAGAGAAAATTCCCTGGTGAACCTAAAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTCAGTGTTCAGTCTCAAGAGAAAATTCCCTGGTGAACCTAAAGAA  500

seq1  ATCCAGAACTTCCCCCTGGAAGCTAGACTACACATAGCAAGTAAGTGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGAACTTCCCCCTGGAAGCTAGACTACACATAGCAAGTAAGTGGCC  550

seq1  CCAACCCTAGTCGGAGGATTGCATGAGTGGACAGGATCACTTCGCCTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCCTAGTCGGAGGATTGCATGAGTGGACAGGATCACTTCGCCTGAG  600

seq1  GTGCTGCCTGTCTTTCTAATTCATTTTTCCTCTATCTGTAAGACTGGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGCCTGTCTTTCTAATTCATTTTTCCTCTATCTGTAAGACTGGGAA  650

seq1  TCAGGCCCATCTCCATCTCATTGGATGGCCTCTAGGATGCACCCTAAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCCCATCTCCATCTCATTGGATGGCCTCTAGGATGCACCCTAAAGA  700

seq1  ATTGGGGCAAGCTCAACCCAAACATTTTCAAAAGGAAGCAACTTGCTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGGCAAGCTCAACCCAAACATTTTCAAAAGGAAGCAACTTGCTTTC  750

seq1  TTTTGCAATAAAGCCTGGCTCTATTATGAGCTGGGGT-GGAAGACTTGTC  799
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTTTGCAATAAAGCCTGGCTCTATTATGAGCTGGGGTGGGAAGACTTGTC  800

seq1  TTTGAATGGGAGCCAAAATAAATACCATACTACAGTTGTTGACTTGTTTT  849
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTG-ATGGGAGCCAAAATAAATACCATACTACAGTTGTTGACTTGTTTT  849

seq1  TCAGACAATGAACAAAAAATAGCAACAAGGTCCCTTATGTTTAAGCCTCT  899
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TCAGACAATGAAC-AAAAATAGCAACAAGGTCCCTTATGTTTAAGCCTCT  898

seq1  TATGTTAATTACATTGCCATGCTCCTGCTTGATCTACTTTGAAGGTGAAA  949
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TATGTTAATTACATTGCCATGCTCCTGCTTGATCTACTTTGAAAGTGAAA  948

seq1  AAGAAAAAGGGAGAAGTTTTGTGGTTTTCTTGCTCACA-TTTGTATGTAG  998
      ||||||||||||| |||||||| ||||||||||||||| |||||||||||
seq2  AAGAAAAAGGGAG-AGTTTTGT-GTTTTCTTGCTCACATTTTGTATGTAG  996

seq1  CCTTAAAGGAAACTCCAACTTCTGAAAAAGCTGCAAATTCAATC  1042
      |||||||||||||||||||||||| |||||||||    ||||||
seq2  CCTTAAAGGAAACTCCAACTTCTG-AAAAGCTGC----TCAATC  1035

seq1: chr13_4415730_4416767
seq2: B6Ng01-141G23.g_67_1095 (reverse)

seq1  TATAAAATTTATCATTCTCTCATAATGCAATAAAA-CATTCAGAGTGCAG  49
      |||||||||| || ||||||| ||||||||||||| ||| ||||||||||
seq2  TATAAAATTTCTC-TTCTCTC-TAATGCAATAAAACCATCCAGAGTGCAG  48

seq1  GAGTAGCCAGAGCTTATCTGAATATAAACATCTACACGAATGGAAAACCC  99
      |||| | |||||||| |||||| || |||||| || || || ||||||||
seq2  GAGT-GGCAGAGCTTTTCTGAA-ATTAACATC-AC-CGGAT-GAAAACCC  93

seq1  ACAATTGCCATTATGCACATTGAATTCATGTTTGATATTTCCACAAGTAA  149
      ||||| |||||||||||||||||||||||| |||||||||||||||||||
seq2  ACAATGGCCATTATGCACATTGAATTCATG-TTGATATTTCCACAAGTAA  142

seq1  TCAACATGATATAGTGTGTTCTAGACAGAACTCTTAGGTAACAAAAAATA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATGATATAGTGTGTTCTAGACAGAACTCTTAGGTAACAAAAAATA  192

seq1  TATTAAACGTGCTATCAGATGCCCACAAGAAAAGAACACTCAGACATACA  249
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TATT-AACGTGCTATCAGATGCCCACAAGAAAAGAACACTCAGACATACA  241

seq1  ATTGAAAATGTCTTTATTAAGCCATCTGGGACTCTACTTGGGTATTTTGG  299
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATTGAAAATGTCTTTATTAAGCCATCTGGGACTCTACTTGGATATTTTGG  291

seq1  ACTCAAGTGTAGCACTGAACATTTAAGGTAAAGAGATTTTTTAAAAAGCA  349
      ||||||||||||||||||||| ||||| ||||||||||||||||||||||
seq2  ACTCAAGTGTAGCACTGAACA-TTAAGATAAAGAGATTTTTTAAAAAGCA  340

seq1  AAATCCACACCCTGATACCTCACTTGGCCATTGCAGGAGGAGATTTTACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCACACCCTGATACCTCACTTGGCCATTGCAGGAGGAGATTTTACA  390

seq1  AAGTTAAGATAAGCAGTTTGCTTAAGTTCGAGGTTTGAACAAGCAGGTAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAAGATAAGCAGTTTGCTTAAGTTCGAGGTTTGAACAAGCAGGTAT  440

seq1  TTTAACAAAAAATTAGCTGGGGCATCTTAATCTAAGGTTCTTAGAAGAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACAAAAAATTAGCTGGGGCATCTTAATCTAAGGTTCTTAGAAGAGA  490

seq1  GTTGAGTAATTTTCCAGGGGATTTTTCCATCAAGGAGATGAAATTCTAGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGTAATTTTCCAGGGGATTTTTCCATCAAGGAGATGAAATTCTAGT  540

seq1  TGAACCTGAAACATTATCAGCAGCAATATGAGATGGAGCAATCCCTTCAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCTGAAACATTATCAGCAGCAATATGAGATGGAGCAATCCCTTCAC  590

seq1  TGTCTGTCCCTGTTTAAAAAAAAAAAGTTAGTCATTGTGGAGAAAAAGCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTCCCTGTTTAAAAAAAAAAAGTTAGTCATTGTGGAGAAAAAGCA  640

seq1  TTATATTTTGTCACAAAGAGCATAATCTTATATGTAGAAAACTTTGCAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTTGTCACAAAGAGCATAATCTTATATGTAGAAAACTTTGCAGA  690

seq1  TTCCAGAAACAAATCTGGATATTAAAACTAATCTCTAAAATGAAAAAAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGAAACAAATCTGGATATTAAAACTAATCTCTAAAATGAAAAAAAA  740

seq1  AAAAATCAAGAAACGACATACACCATCAAGTATTCATTCCTTACAGTCAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCAAGAAACGACATACACCATCAAGTATTCATTCCTTACAGTCAC  790

seq1  CAAAATGAGAAACAAGCTAGTGACATCACAAAGTATATACCATCCAGAGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGAGAAACAAGCTAGTGACATCACAAAGTATATACCATCCAGAGA  840

seq1  TCAGTGTCATTCTACTTGTCAGCATCAATCGAAAACAGGACAGTAGAGCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTCATTCTACTTGTCAGCATCAATCGAAAACAGGACAGTAGAGCA  890

seq1  CCCAGGCATGGAAAGTCATGCCATGCAGCTGGGAAAACATGAAAGGAGCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGCATGGAAAGTCATGCCATGCAGCTGGGAAAACATGAAAGGAGCC  940

seq1  AATTTACCTAAATTATTTTGATCAAAACTGTCAACTTCACTTCATTTCCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACCTAAATTATTTTGATCAAAACTGTCAACTTCACTTCATTTCCT  990

seq1  AACATTTTCTTGGTTGATTTCTCATTCATTCTTGAATTC  1038
      |||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTCTTGGTTGATTTCTCATTCATTCTTGAATTC  1029