BAC Information

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BAC

Clone NameB6Ng01-144I24
Chromosome13 (Build37)
Map Location 83,857,143 - 83,858,285
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667018, Mef2c, LOC100043111
Downstream geneLOC623241, LOC432789, 2810049E08Rik, LOC100043119, LOC667081, LOC667101, Tmem161b, LOC666795, LOC667111, LOC382786
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144I24.bB6Ng01-144I24.g
ACCDH942210DH942211
length1,1181,182
definitionDH942210|Mus musculus domesticus DNA, BAC clone: B6Ng01-144I24, 5' end.DH942211|Mus musculus domesticus DNA, BAC clone: B6Ng01-144I24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttcaccagttttggtagctgtagaagaggacttcaagcaggg
ttagccatgtttctttaggcaggaaagtaagagacttgaggactaatgac
cccactcaacaatgtccttgctgacatcactttcttggcattctgaaatt
tgccacccacagatatttgaaaccttagataaccaaaggaattatgtgag
ccttaaaaagtcacatgctgaatttggggagtggccttcattttttatga
taaaacagaatagctttaaactggtgaatatgaagtctaaattgaacttc
cccattgatttctgaaaggaacaatcattcaaggtaaccaaaagggcagg
ttaaaaaatgggcactatgagacttgtagcagaagctccacatggtgacc
atcggacacacagggcacagagttaggtatgtagtggtagttcgctaatg
ggctgtgcatcctggctccttaattcagattggcgaatttagacaaaagc
ttgcaggttagcaaggcttgggtccatcatacaaacgaagttccatcttt
gtagatactgttctctcactggctgctgctggaaacctggcaatgtctct
ctctattgatatttatatgaccctagaatgccattgagctgtgttaatca
ttgtgaggactatcagcagtgactacctgtaaataattttttttttacaa
gtctctgaaagataagcaggaaaaatgtttcttgtggtggtaaaggttca
actggagccattaatatgtcctaatcagcgctgcttgatagtgaaggttc
tggccctcctggctgttgcaaaagcctttgtttgtttgtctgcttgtttg
tttaatcaggatggaccagtgaagacaatcagacagcacccccacagaca
ccactattttcggggcagtataactctctacatgaatctcaattttagtc
tctcaggccagctgaatactggtagcaacagtggagaagagtctaacata
aacctttctcctcagtgagaggattggagagagaacttttctctcttctt
ctccagacaggtcaatttcagtctctcttgagctacctccagtgcagctg
caactgccagacatacct
gaattcctacagctagaaaacactttcagcaaagcagatggatgtaggat
taacataaaaaaatcagtagtcatcctatatagaaatggtatgagaaaga
aatgaggaaaacaaaaccacaatagttttcaaataatataaaatatcttg
gggtaactataactaagcaggtaaaagaatagcattattaaaaagttcaa
atctttgaagaaagaaattgaagaagataccagaagttggaaagctcttg
cataattatacttaagtagaattaacatagtaaaaatggccatcctacta
aaagcaatctacagattcaatgccatccccatcaaaatcccaacacaatt
cttctaaggcctaaagaggacaattctcaacttaatatggaaaaacaaaa
atcccacgaataactaaaacaatcctgaacaataaaagaactgctggagg
tttcttccttttctatttcaagttgtactacagatatatagtaataaaaa
tggtgtattgtgggcttgaaaaataggtatgttgatcaacggaattgaat
tgaagacccagacataaatccacacacccatggatacctgattttttatt
aaaaaaaaaaaaacagaaatgaacactagagaaaaatcagcttcttcaat
aaacagtactggtcaaactggatgtctgcacgaagtggaacacaaacaga
tccatacttatcaccttgcacaaagctcaactaaaagtgaataaaaggcc
tcaacataaagctagatacacagaacctgatagaagataaagtaaagaat
agacctgaatgcactgacacacgtgaagactcttttatcagaacatcatt
agcacaggcattaagatcaatgattaacaaatgggactttatgaaattga
aaaggtttgtaaggcaaagaaaaccatcatttggacaagcagcagccgac
aaattacaaaagcatttttacactcctatcagtagagagtataacaaaat
atataagactcagaactagatattcaaaatcggatatctattaaaatgaa
ttagatctatacaaggaatactcacgagaaactgtatgtcttgaaagcac
tcaagcaaattccaatctagcccatgtaatggatcaactgtgcatcatct
gtaaccgtcagaaatgcctagaataaaactta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_83857143_83858285
seq2: B6Ng01-144I24.b_47_1164

seq1  GAATTCATTTCACCAGTTTTGGTAGCTGTAGAAGAGGACTTCAAGCAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCACCAGTTTTGGTAGCTGTAGAAGAGGACTTCAAGCAGGG  50

seq1  TTAGCCATGTTTCTTTAGGCAGGAAAGTAAGAGACTTGAGGACTAATGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCATGTTTCTTTAGGCAGGAAAGTAAGAGACTTGAGGACTAATGAC  100

seq1  CCCACTCAACAATGTCCTTGCTGACATCACTTTCTTGGCATTCTGAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCAACAATGTCCTTGCTGACATCACTTTCTTGGCATTCTGAAATT  150

seq1  TGCCACCCACAGATATTTGAAACCTTAGATAACCAAAGGAATTATGTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACCCACAGATATTTGAAACCTTAGATAACCAAAGGAATTATGTGAG  200

seq1  CCTTAAAAAGTCACATGCTGAATTTGGGGAGTGGCCTTCATTTTTTATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAAAAGTCACATGCTGAATTTGGGGAGTGGCCTTCATTTTTTATGA  250

seq1  TAAAACAGAATAGCTTTAAACTGGTGAATATGAAGTCTAAATTGAACTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAGAATAGCTTTAAACTGGTGAATATGAAGTCTAAATTGAACTTC  300

seq1  CCCATTGATTTCTGAAAGGAACAATCATTCAAGGTAACCAAAAGGGCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTGATTTCTGAAAGGAACAATCATTCAAGGTAACCAAAAGGGCAGG  350

seq1  TTAAAAAATGGGCACTATGAGACTTGTAGCAGAAGCTCCACATGGTGACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAATGGGCACTATGAGACTTGTAGCAGAAGCTCCACATGGTGACC  400

seq1  ATCGGACACACAGGGCACAGAGTTAGGTATGTAGTGGTAGTTCGCTAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGACACACAGGGCACAGAGTTAGGTATGTAGTGGTAGTTCGCTAATG  450

seq1  GGCTGTGCATCCTGGCTCCTTAATTCAGATTGGCGAATTTAGACAAAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTGCATCCTGGCTCCTTAATTCAGATTGGCGAATTTAGACAAAAGC  500

seq1  TTGCAGGTTAGCAAGGCTTGGGTCCATCATACAAACGAAGTTCCATCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGGTTAGCAAGGCTTGGGTCCATCATACAAACGAAGTTCCATCTTT  550

seq1  GTAGATACTGTTCTCTCACTGGCTGCTGCTGGAAACCTGGCAATGTCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATACTGTTCTCTCACTGGCTGCTGCTGGAAACCTGGCAATGTCTCT  600

seq1  CTCTATTGATATTTATATGACCCTAGAATGCCATTGAGCTGTGTTAATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATTGATATTTATATGACCCTAGAATGCCATTGAGCTGTGTTAATCA  650

seq1  TTGTGAGGACTATCAGCAGTGACTACCTGTAAATAATTTTTTTTTTACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAGGACTATCAGCAGTGACTACCTGTAAATAATTTTTTTTTTACAA  700

seq1  GTCTCTGAAAGATAAGCAGGAAAAATGTTTCTTGTGGTGGTAAAGGTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGAAAGATAAGCAGGAAAAATGTTTCTTGTGGTGGTAAAGGTTCA  750

seq1  ACTGGAGCCATTAATATGTCCTAATCAGCGCTGCTTGATAGTGAAGGTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAGCCATTAATATGTCCTAATCAGCGCTGCTTGATAGTGAAGGTTC  800

seq1  TGGCCCTCCTGGCTGTTGCAAAAGCCTTTGTTTGTTTGTCTGCTTGTTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCTCCTGGCTGTTGCAAAAGCCTTTGTTTGTTTGTCTGCTTGTTTG  850

seq1  TTTTAATCAGGATGGACCAGTGAAGACAATCAGACAGCACCCCCACAGAC  900
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTTAATCAGGATGGACCAGTGAAGACAATCAGACAGCACCCCCACAGAC  899

seq1  ACCACTATTTTCGGGGCAGGTATAACTCTCTACATGAATCTCAATTTTAG  950
      |||||||||||||||||| |||||||||||||||||||||||||||||| 
seq2  ACCACTATTTTCGGGGCA-GTATAACTCTCTACATGAATCTCAATTTTA-  947

seq1  GTCTCTCAGGCCAGCTGAATACTGGTAGCAACAGTGGAGAAGAGTCTAAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTCAGGCCAGCTGAATACTGGTAGCAACAGTGGAGAAGAGTCTAAC  997

seq1  ATAAACCTTTCTCCTCAGTGAGAGGATTTGGAGAGAGAAACCTTTTTCCT  1050
      |||||||||||||||||||||||||| ||||||||||||  |||||  ||
seq2  ATAAACCTTTCTCCTCAGTGAGAGGA-TTGGAGAGAGAA--CTTTTCTCT  1044

seq1  CTTCCTTCTCTTCCTCCCAGAACCAGGTCACATTTCCAAGTCTCTCCTGG  1100
      ||| |||||       |||||  ||||||| |||||  |||||||| || 
seq2  CTT-CTTCT-------CCAGA--CAGGTCA-ATTTC--AGTCTCTCTTG-  1080

seq1  AAGCCACACTCCCAGTGCCAGCTGCACACTGCCAGACATACCT  1143
       ||| || || |||||| |||||||| ||||||||||||||||
seq2  -AGCTAC-CT-CCAGTG-CAGCTGCA-ACTGCCAGACATACCT  1118