BAC Information

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BAC

Clone NameB6Ng01-144P19
Chromosome13 (Build37)
Map Location 48,335,276 - 48,458,768
singlet/doubletdoublet
Overlap geneId4, LOC667351
Upstream geneIbrdc2, 4931429P17Rik
Downstream geneZfp169, A830005F24Rik, AW456874, Barx1, Phf2, EG667415, BC010304, C030044B11Rik, Wnk2, Ninj1, 1110007C09Rik, Susd3, Fgd3, Bicd2
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144P19.bB6Ng01-144P19.g
ACCDH942520DH942521
length9881,072
definitionDH942520|Mus musculus domesticus DNA, BAC clone: B6Ng01-144P19, 5' end.DH942521|Mus musculus domesticus DNA, BAC clone: B6Ng01-144P19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(48,458,121 - 48,458,768)(48,335,276 - 48,336,370)
sequence
gaattcactcacgacgatggctctcttatgaactaaccacatcctgaagc
cgttactttacagtactgctgtagcagaaataatatttgagcctaagttt
tgaagaggatgctccagccttagtaatttacaagccaacatccataaaat
accaggagacaacaagccaacttcacagtccacacagtagatcttaagga
aataactaacacacttaaaaattaaagaaccagaaatgagaacagaatga
cgtaggaggggacagaagaaccgaggactgtgaacaacgctatcaaaagt
ttcaggcaatttctagacgtgaataatgtggtcattgaaattgatttaaa
aaaaaaaaaggtatgtgtataaagcttaagaagcaggccagccagacctg
gagactaggaaatatgaaattaaattttatattaagagtgatgtaaaaat
aagatactggaagaagttgaaaatagaagttctctgtaatgtctaaataa
agttccagaaaagtgtaatgagaagcagaaaatatttaaaagttaaaaag
ctaagaatcttctagaattaaacaccgatataaatcatcacattgagaaa
gcacaagaagctccaagcagtagcagtaaaacgaaaatatagtcaaaata
tagtcatattttctactgttgaacagcagaacacgagagacaaagagttc
ttaaaagcaattaggagggaaaggaacgcttccttaattagaccccaatt
agactccctgacagcaaaaactgaagccaaaagacagtaggataattcca
aagtgctgtgataaaattattctttcaaattattattcaaaaaaatcttt
tttcaaggttaggggcaatttaatgttattgttggacaaatgactgagag
tctgtcactagtgacctcactaagatctacttaaatggggggtaccacag
tggagggcattcctgaggtattcaccatgtaggaagaa
gaattccagtactggggaggaagagactgggacccttggggcttgctggc
cagccagcttatcctaattgggagacttcaaggcaatgagagagcctgtc
tccaaagaagtgaattgtggtttgaaaattacaagggaggtagtcttctg
gccttcatgtgcaaacacacacatacacatgtatgcacacacatgcacac
acatgttctcaaacatagacacacacacacatttaatctttagtgttaat
gcagaaaatatcactcaaccccactacaagcttccccccccctgaaatta
acctggaggccaatcatgcttataagaaataattgttagagacaagacag
aaaaatacacagagatcaagaatatatgacatcagtagttgtaagtaaga
agactcagtttcttttcagatggaaaagggaacatgttagactcctgggc
tgctactgtttgaagagtgtagactaaaatctggaagagctcgtgtattt
cggctgtgaagcactgttcctgaatgttcatcttgtgaaagtcgcttggc
cacggacagtaaactctcacaggtgagggatatttgggatccattggtga
tatacacaccgcaacattcagatttcatatcaagtctctttgacatttgt
cttcaacatggcaagtcttacaaagatgtagacttttaaaaagaaaccct
agaaagaaaggaaaaacaaaataggtagataatcggtccagaagctatcc
tctgccagagcttcccctccgaggagctgggggagacgtcatcttgctaa
aggactggttttactgagctgttttgcacaccataaggaagattatcaac
ctcatgaatataaagccagaactctctctcctgagggggggcgggggggc
gggaaagcaaacccgaacaggtacgtttccctgaacagacatcgggctga
tgcttattcttgacgctgtgaggaagtatagcggtttctgccacatagag
acgttcgtcagcatgcttaaattcccacagttccatctcatgcgctatgg
tggatgattcattatcacttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_48458121_48458768
seq2: B6Ng01-144P19.b_50_697 (reverse)

seq1  TTTTGACTATATTTTCGTTTTACTGCTACTGCTTGGAGCTTCTTGTGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGACTATATTTTCGTTTTACTGCTACTGCTTGGAGCTTCTTGTGCTT  50

seq1  TCTCAATGTGATGATTTATATCGGTGTTTAATTCTAGAAGATTCTTAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAATGTGATGATTTATATCGGTGTTTAATTCTAGAAGATTCTTAGCT  100

seq1  TTTTAACTTTTAAATATTTTCTGCTTCTCATTACACTTTTCTGGAACTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACTTTTAAATATTTTCTGCTTCTCATTACACTTTTCTGGAACTTT  150

seq1  ATTTAGACATTACAGAGAACTTCTATTTTCAACTTCTTCCAGTATCTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGACATTACAGAGAACTTCTATTTTCAACTTCTTCCAGTATCTTAT  200

seq1  TTTTACATCACTCTTAATATAAAATTTAATTTCATATTTCCTAGTCTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACATCACTCTTAATATAAAATTTAATTTCATATTTCCTAGTCTCCA  250

seq1  GGTCTGGCTGGCCTGCTTCTTAAGCTTTATACACATACCTTTTTTTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGGCTGGCCTGCTTCTTAAGCTTTATACACATACCTTTTTTTTTTT  300

seq1  TAAATCAATTTCAATGACCACATTATTCACGTCTAGAAATTGCCTGAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCAATTTCAATGACCACATTATTCACGTCTAGAAATTGCCTGAAAC  350

seq1  TTTTGATAGCGTTGTTCACAGTCCTCGGTTCTTCTGTCCCCTCCTACGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATAGCGTTGTTCACAGTCCTCGGTTCTTCTGTCCCCTCCTACGTC  400

seq1  ATTCTGTTCTCATTTCTGGTTCTTTAATTTTTAAGTGTGTTAGTTATTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTTCTCATTTCTGGTTCTTTAATTTTTAAGTGTGTTAGTTATTTC  450

seq1  CTTAAGATCTACTGTGTGGACTGTGAAGTTGGCTTGTTGTCTCCTGGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGATCTACTGTGTGGACTGTGAAGTTGGCTTGTTGTCTCCTGGTAT  500

seq1  TTTATGGATGTTGGCTTGTAAATTACTAAGGCTGGAGCATCCTCTTCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGGATGTTGGCTTGTAAATTACTAAGGCTGGAGCATCCTCTTCAAA  550

seq1  ACTTAGGCTCAAATATTATTTCTGCTACAGCAGTACTGTAAAGTAACGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGGCTCAAATATTATTTCTGCTACAGCAGTACTGTAAAGTAACGGC  600

seq1  TTCAGGATGTGGTTAGTTCATAAGAGAGCCATCGTCGTGAGTGAATTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGATGTGGTTAGTTCATAAGAGAGCCATCGTCGTGAGTGAATTC  648

seq1: chr13_48335276_48336370
seq2: B6Ng01-144P19.g_69_1140

seq1  GAATTCCAGTACTGGGGAGGAAGAGACTGGGACCCTTGGGGCTTGCTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTACTGGGGAGGAAGAGACTGGGACCCTTGGGGCTTGCTGGC  50

seq1  CAGCCAGCTTATCCTAATTGGGAGACTTCAAGGCAATGAGAGAGCCTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGCTTATCCTAATTGGGAGACTTCAAGGCAATGAGAGAGCCTGTC  100

seq1  TCCAAAGAAGTGAATTGTGGTTTGAAAATTACAAGGGAGGTAGTCTTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGAAGTGAATTGTGGTTTGAAAATTACAAGGGAGGTAGTCTTCTG  150

seq1  GCCTTCATGTGCAAACACACACATACACATGTATGCACACACATGCACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCATGTGCAAACACACACATACACATGTATGCACACACATGCACAC  200

seq1  ACATGTTCTCAAACATAGACACACACACACATTTAATCTTTAGTGTTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTTCTCAAACATAGACACACACACACATTTAATCTTTAGTGTTAAT  250

seq1  GCAGAAAATATCACTCAACCCCACTACAAGCTTCCCCCCCCCTGAAATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAAATATCACTCAACCCCACTACAAGCTTCCCCCCCCCTGAAATTA  300

seq1  ACCTGGAGGCCAATCATGCTTATAAGAAATAATTGTTAGAGACAAGACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGAGGCCAATCATGCTTATAAGAAATAATTGTTAGAGACAAGACAG  350

seq1  AAAAATACACAGAGATCAAGAATATATGACATCAGTAGTTGTAAGTAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATACACAGAGATCAAGAATATATGACATCAGTAGTTGTAAGTAAGA  400

seq1  AGACTCAGTTTCTTTTCAGATGGAAAAGGGAACATGTTAGACTCCTGGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCAGTTTCTTTTCAGATGGAAAAGGGAACATGTTAGACTCCTGGGC  450

seq1  TGCTACTGTTTGAAGAGTGTAGACTAAAATCTGGAAGAGCTCGTGTATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACTGTTTGAAGAGTGTAGACTAAAATCTGGAAGAGCTCGTGTATTT  500

seq1  CGGCTGTGAAGCACTGTTCCTGAATGTTCATCTTGTGAAAGTCGCTTGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTGTGAAGCACTGTTCCTGAATGTTCATCTTGTGAAAGTCGCTTGGC  550

seq1  CACGGACAGTAAACTCTCACAGGTGAGGGATATTTGGGATCCATTGGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGACAGTAAACTCTCACAGGTGAGGGATATTTGGGATCCATTGGTGA  600

seq1  TATACACACCGCAACATTCAGATTTCATATCAAGTCTCTTTGACATTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACACACCGCAACATTCAGATTTCATATCAAGTCTCTTTGACATTTGT  650

seq1  CTTCAACATGGCAAGTCTTACAAAGATGTAGACTTTTAAAAAGAAACCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAACATGGCAAGTCTTACAAAGATGTAGACTTTTAAAAAGAAACCCT  700

seq1  AGAAAGAAAGGAAAAACAAAATAGGTAGATAATCGGTCCAGAAGCTATCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAGGAAAAACAAAATAGGTAGATAATCGGTCCAGAAGCTATCC  750

seq1  TCTGCCAGAGCTTCCCCTCCGAGGAGCTGGGGGAGACGTCATCTTGCT-A  799
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCTGCCAGAGCTTCCCCTCCGAGGAGCTGGGGGAGACGTCATCTTGCTAA  800

seq1  AGGACTGGTTTTACTGAGCTGTTTTGCACACCATAAGGAAGATTATCAAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGGTTTTACTGAGCTGTTTTGCACACCATAAGGAAGATTATCAAC  850

seq1  CTCATGAATATAAAGCCAGAACTCTCTCTCCTGAGGGGGGGC-GGGGGGC  898
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTCATGAATATAAAGCCAGAACTCTCTCTCCTGAGGGGGGGCGGGGGGGC  900

seq1  GGGAAGCAAAACCCGAACAGGTACGTTTCCTTGAACAGACAATCCGGGCT  948
      |||||   |||||||||||||||||||||| ||||||||||   ||||||
seq2  GGGAAAGCAAACCCGAACAGGTACGTTTCCCTGAACAGACA--TCGGGCT  948

seq1  GATGCTTTATTCTTGACGCCTTGTGAGGGAAGTTATAGCCGGGTTTCTGG  998
      ||||| |||||||||||||  ||||| ||||| ||||||  |||||||| 
seq2  GATGC-TTATTCTTGACGC--TGTGA-GGAAG-TATAGC--GGTTTCTGC  991

seq1  CACACATAGGAGACGTTCAGTCAGCAATGCTTTAAAATCCCCACAGTCCC  1048
      |||| |   ||||||||| |||||| ||||||  |||| |||||||| ||
seq2  CACATA---GAGACGTTC-GTCAGC-ATGCTT--AAATTCCCACAGTTCC  1034

seq1  ATCTCATGGCGTCTAATTGTGTGAGATAGATTCTATTTATCACTTAA  1095
      ||||||| ||| || || |||   ||| |||||   |||||||||||
seq2  ATCTCAT-GCG-CT-ATGGTG---GAT-GATTC--ATTATCACTTAA  1072