BAC Information

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BAC

Clone NameB6Ng01-147P12
Chromosome13 (Build37)
Map Location 31,515,081 - 31,650,991
singlet/doubletdoublet
Overlap geneFoxq1
Upstream geneUqcrfs1, Dusp22, LOC666443, Irf4, Exoc2, Hus1b, EG432743, LOC100041257, LOC100041266, G630018N14Rik, LOC100042491
Downstream geneLOC100041312, Foxf2, Foxc1, 4930548F15Rik, Gmds, LOC666212
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147P12.bB6Ng01-147P12.g
ACCDH944698DH944699
length4161,096
definitionDH944698|Mus musculus domesticus DNA, BAC clone: B6Ng01-147P12, 5' end.DH944699|Mus musculus domesticus DNA, BAC clone: B6Ng01-147P12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,650,576 - 31,650,991)(31,515,081 - 31,516,177)
sequence
gaattcctctcgccgccgccaccttccagatccccggcgccgctgcccgc
cgccgggctgttggctgcacagtccccgtctgagcctaaggagtcgtcac
cagccgcggacagtggagatggcacgtcgctgctgccggccccctccaga
tcgctgcccattttgtccccgtgggctgcgcgtgggacgaacacctccaa
tttcatgccggcgctggtgcttccagtccggcacagttacccctttcctg
cgaggtcgtaggaagcgagtggcgcccggagtggcgatcccgtggcccgc
tgagtctgtcttctcctgggagggaccgctcctgcgtctttccgagagag
acgcttttccgaaaggttctcctccgctgggattttttttgggaggggtt
ttgattgttgggtgaa
gaattcaccatttaatgatggaagagccacttaacttggttgtgtgttgc
tgtcctgcttggttattttaaacataagaactcagagaaattgaagaaag
cttaacatgaacccacaccacagctctctggacaatttgccccgcagaca
aagacatagcaaagacccctagatccatatggggcccctaggcccaggac
attatgacccttttccctatgtcaagtggggagcaatggtgtctgtgttg
aggaacgctgacacaactcatgatccagctttcaggtgcttcacacagtg
cttgcagaacaagcacctccagcgccagtttctattaggcatatgtcgaa
gcaacttttactaacatcttctattttttaatgccatacaggaaagaact
tcacatttttttctgctttcatatactaaccaacagaaggaaaattccac
ctggaaatatgtgtccaaatgccaagaaacagaagtacctgagtgcttaa
tgacccagcataaatcaccaggcagggttatgaaagccacgggtttatca
gagggagcggcagatgaagggcctggatggttggtgcatgtctggaacag
ggaacaagtcatgattttcatgtcctaccttgccaagctaaggctggtaa
gtgggccagcctaaatatttcccagtgtcaagcagtaaggaggaaaggcg
aagctcacagtgggagcagagcactttcctgcacagagaattaacctggt
ctccagcctgctcttgagcaggaggttttcctggaagggactccttagac
cttctgactaacttgtgtgtgtacctgggcaggctctgggcagacacgca
tgtttgcagaacacgtattcctagcacaaaaagaggagcacgtgtcaaag
tcagcaacaggcctcacatacgttgatggtagtgattggctcactttaat
aatctgagagagtgcatctttttagcgaggcagttagctacaagaacagc
aaaagctacctatgtggcctcaaaagcttaggtggacctgaagtctcagt
gcttggggggtatgcaggaagggcagaaagtttcaaggccagcctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_31650576_31650991
seq2: B6Ng01-147P12.b_44_459 (reverse)

seq1  TTCACCCAACAATCAAAACCCCTCCCAAAAAAAATCCCAGCGGAGGAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCCAACAATCAAAACCCCTCCCAAAAAAAATCCCAGCGGAGGAGAA  50

seq1  CCTTTCGGAAAAGCGTCTCTCTCGGAAAGACGCAGGAGCGGTCCCTCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCGGAAAAGCGTCTCTCTCGGAAAGACGCAGGAGCGGTCCCTCCCA  100

seq1  GGAGAAGACAGACTCAGCGGGCCACGGGATCGCCACTCCGGGCGCCACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAGACAGACTCAGCGGGCCACGGGATCGCCACTCCGGGCGCCACTC  150

seq1  GCTTCCTACGACCTCGCAGGAAAGGGGTAACTGTGCCGGACTGGAAGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTACGACCTCGCAGGAAAGGGGTAACTGTGCCGGACTGGAAGCAC  200

seq1  CAGCGCCGGCATGAAATTGGAGGTGTTCGTCCCACGCGCAGCCCACGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGCCGGCATGAAATTGGAGGTGTTCGTCCCACGCGCAGCCCACGGGG  250

seq1  ACAAAATGGGCAGCGATCTGGAGGGGGCCGGCAGCAGCGACGTGCCATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATGGGCAGCGATCTGGAGGGGGCCGGCAGCAGCGACGTGCCATCT  300

seq1  CCACTGTCCGCGGCTGGTGACGACTCCTTAGGCTCAGACGGGGACTGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGTCCGCGGCTGGTGACGACTCCTTAGGCTCAGACGGGGACTGTGC  350

seq1  AGCCAACAGCCCGGCGGCGGGCAGCGGCGCCGGGGATCTGGAAGGTGGCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAACAGCCCGGCGGCGGGCAGCGGCGCCGGGGATCTGGAAGGTGGCG  400

seq1  GCGGCGAGAGGAATTC  416
      ||||||||||||||||
seq2  GCGGCGAGAGGAATTC  416

seq1: chr13_31515081_31516177
seq2: B6Ng01-147P12.g_68_1163

seq1  GAATTCACCATTTAATGATGGAAGAGCCACTTAACTTGGTTGTGTGTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCATTTAATGATGGAAGAGCCACTTAACTTGGTTGTGTGTTGC  50

seq1  TGTCCTGCTTGGTTATTTTAAACATAAGAACTCAGAGAAATTGAAGAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGCTTGGTTATTTTAAACATAAGAACTCAGAGAAATTGAAGAAAG  100

seq1  CTTAACATGAACCCACACCACAGCTCTCTGGACAATTTGCCCCGCAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACATGAACCCACACCACAGCTCTCTGGACAATTTGCCCCGCAGACA  150

seq1  AAGACATAGCAAAGACCCCTAGATCCATATGGGGCCCCTAGGCCCAGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATAGCAAAGACCCCTAGATCCATATGGGGCCCCTAGGCCCAGGAC  200

seq1  ATTATGACCCTTTTCCCTATGTCAAGTGGGGAGCAATGGTGTCTGTGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGACCCTTTTCCCTATGTCAAGTGGGGAGCAATGGTGTCTGTGTTG  250

seq1  AGGAACGCTGACACAACTCATGATCCAGCTTTCAGGTGCTTCACACAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACGCTGACACAACTCATGATCCAGCTTTCAGGTGCTTCACACAGTG  300

seq1  CTTGCAGAACAAGCACCTCCAGCGCCAGTTTCTATTAGGCATATGTCGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGAACAAGCACCTCCAGCGCCAGTTTCTATTAGGCATATGTCGAA  350

seq1  GCAACTTTTACTAACATCTTCTATTTTTTAATGCCATACAGGAAAGAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTTTTACTAACATCTTCTATTTTTTAATGCCATACAGGAAAGAACT  400

seq1  TCACATTTTTTTCTGCTTTCATATACTAACCAACAGAAGGAAAATTCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTTTTTTCTGCTTTCATATACTAACCAACAGAAGGAAAATTCCAC  450

seq1  CTGGAAATATGTGTCCAAATGCCAAGAAACAGAAGTACCTGAGTGCTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAATATGTGTCCAAATGCCAAGAAACAGAAGTACCTGAGTGCTTAA  500

seq1  TGACCCAGCATAAATCACCAGGCAGGGTTATGAAAGCCACGGGTTTATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCAGCATAAATCACCAGGCAGGGTTATGAAAGCCACGGGTTTATCA  550

seq1  GAGGGAGCGGCAGATGAAGGGCCTGGATGGTTGGTGCATGTCTGGAACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGCGGCAGATGAAGGGCCTGGATGGTTGGTGCATGTCTGGAACAG  600

seq1  GGAACAAGTCATGATTTTCATGTCCTACCTTGCCAAGCTAAGGCTGGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAAGTCATGATTTTCATGTCCTACCTTGCCAAGCTAAGGCTGGTAA  650

seq1  GTGGGCCAGCCTAAATATTTCCCAGTGTCAAGCAGTAAGGAGGAAAGGCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCCAGCCTAAATATTTCCCAGTGTCAAGCAGTAAGGAGGAAAGGCG  700

seq1  AAGCTCACAGTGGGAGCAGAGCACTTTCCTGCACAGAGAATTAACCTGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCACAGTGGGAGCAGAGCACTTTCCTGCACAGAGAATTAACCTGGT  750

seq1  CTCCAGCCTGCTCTTGAGCAGGAGGTTTTCCTGGAAGGGACTCCTTAGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCCTGCTCTTGAGCAGGAGGTTTTCCTGGAAGGGACTCCTTAGAC  800

seq1  CTTCTGACTAACTTGTGTGTGTACCTGGGCAGGCTCTGGGCAGACACGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGACTAACTTGTGTGTGTACCTGGGCAGGCTCTGGGCAGACACGCA  850

seq1  TGTTTGCAGAACACGTATTCCTAGCACAAAAAGAGGAGCACGTGTCAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGCAGAACACGTATTCCTAGCACAAAAAGAGGAGCACGTGTCAAAG  900

seq1  TCAGCAACAGGCCTCACATACGTTGATGGTAGTGATTGGCTCACTTTTAA  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCAGCAACAGGCCTCACATACGTTGATGGTAGTGATTGGCTCAC-TTTAA  949

seq1  TAATCTGAGAGAGTGCATC-TCTTAGCGAGGCAGTTAGCTACAAAGAACA  999
      ||||||||||||||||||| | |||||||||||||||||||| |||||||
seq2  TAATCTGAGAGAGTGCATCTTTTTAGCGAGGCAGTTAGCTAC-AAGAACA  998

seq1  GCAAAAGCTACCTATGTGGCCTCAAAAGCTTAGGTGGACCTGAAGTCTCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAGCTACCTATGTGGCCTCAAAAGCTTAGGTGGACCTGAAGTCTCA  1048

seq1  GTGCTTGGGGGGTAATGCAGGAAGGGCAG-AAGTTTCCAGGCCAGCCTG  1097
      ||||||||||||| ||||||||||||||| ||||||| |||||||||||
seq2  GTGCTTGGGGGGT-ATGCAGGAAGGGCAGAAAGTTTCAAGGCCAGCCTG  1096