BAC Information

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BAC

Clone NameB6Ng01-148E04
Chromosome13 (Build37)
Map Location 77,966,930 - 77,967,743
singlet/doubletsinglet
Overlap gene1110033M05Rik
Upstream geneMctp1, EG666607, Ankrd32, 2210408I21Rik, LOC631139, LOC675063, D13Mgi7
Downstream gene1700013G10Rik, Nr2f1, EG666856, LOC268676, LOC100042683, LOC622365, LOC100043052
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148E04.bB6Ng01-148E04.g
ACCDH944921DH944922
length1,241965
definitionDH944921|Mus musculus domesticus DNA, BAC clone: B6Ng01-148E04, 5' end.DH944922|Mus musculus domesticus DNA, BAC clone: B6Ng01-148E04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggatggttcactatatggaattccatcaacgtaatccactat
ataaacaaactcaaagacaaaaaccacaagatcatctcattagatgctga
gaaagcatttgacaaaatccaacaccccttcatgaaaaaagtcttggaaa
gatcaggaattcaaggcccatacctaaacatgataaaagcaatctacagc
aaaccagtaaccaacatcaaagtaaatggagagaagctggaagcaatccc
actaaaatcagggactagacaaggctgcccacttttccatacctattcaa
tgtagtactagaagtcctagcaagagcaattagaaaaaaaaaaaaaagat
caaaggaatacaaattggacaggaagaactcaaaatatcactatgatatg
atagtatacagaagtgactccattccaccagagaactcctaaacctgata
aacaactcagcaaagtagctggatacaaaattaactctaatcaatggcct
ttctctacacaaaggataaacaggctgagaaagaaattagggaaacaaca
cccttcacaatagtcacaaataatataaaataccttggtgtgattataac
taagcaagtgaaagatctgtatgataagaacttcaagtctctaagaaaga
atacgaagatctcagaagatggaaagatctcccatgctcatagatgtcag
gattaatatagttaaaatgggcatcttgctgaaagcaatctacagattca
atgcaatccccaacaaaattccaactcagttcttcacagaattagaaagg
gtaatttgaaaattctctggaataacaaaaaacctaggatagcaaaaact
attctcaacaataaaagaacctctggtggaatcaccatgcaggacctcaa
cctgtactacagaacaattgtaataaaattgcatggtactgatacagtga
cagacaggtagatcaatggaacagattgaaaacttagaaatgaacccaca
cacctatggacacttgatctttgataaaggagctaaaccattcagtgtaa
gaagacagttatttcaccaatgtgctaggtgactgagttagcatgtagac
aatgtgaattgatcatctttctcctgtactaggtccaaatccaagttgaa
tccaagaactccaataaacgagaaacctgaactttcggagaaatgcaaag
cctagatggccaggatgattccgtacagaccacccgatgtg
gaattccatgaagacccactttcttattctgtaaacaatgtgtattaaag
ctgggtattgtggcacatgtccttaatcccagaacttagttgggaaatgc
cagcagatctgtgtgaggttgaggacagcctggttctattgatttccagg
ccagcttgcgggctctatagtgagatggaatctcaaagtaaggaagcaag
caaacgacctatataaatttgtttattcggtctctaaagaagaacactta
aagactcttgagactatccatatcctgtcccttgttgactataacatttc
tgcctctttggaagtcttttctttttttaaaattttatttaaaaaataaa
tttcagtttatttttaatttatttcttacactccatattccattaacctt
ctcccccatctaccctctgactgctccacatcccacacctcctccccgac
ccacttcacctccacgtgaatgcccccacccccccaccccacctgacctc
taaactccctggggcctccagtctcttgagggttaggttcatcatctctg
aatgaatacaggcccagaagtcctctgctgtatgtgtgttaggggtctca
tatcagctggtgtatgttgtatgtttggtggtccagtgtttgagagatat
tggggggtccagattaattgagactgctggtcctagtacaggatcaccct
tctcctcagcttcctttagccttccctaattcaacaacaggggtcagctg
cttctctccattggttgggtgcaaatatctgcctttcactctttcagcct
tttgttggggtttttcgagggacagtccctttctgtgagatctccatagc
ctcagaatagtgtcagatcttgggatctccccttgagctgaatgccactt
tggtctgttgctggactcctttcctcagctcctctccatttccatccctg
tattctttcagacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_77966930_77967743
seq2: B6Ng01-148E04.g_67_880

seq1  GAATTCCATGAAGACCCACTTTCTTATTCTGTAAACAATGTGTATTAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGAAGACCCACTTTCTTATTCTGTAAACAATGTGTATTAAAG  50

seq1  CTGGGTATTGTGGCACATGTCCTTAATCCCAGAACTTAGTTGGGAAATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTATTGTGGCACATGTCCTTAATCCCAGAACTTAGTTGGGAAATGC  100

seq1  CAGCAGATCTGTGTGAGGTTGAGGACAGCCTGGTTCTATTGATTTCCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGATCTGTGTGAGGTTGAGGACAGCCTGGTTCTATTGATTTCCAGG  150

seq1  CCAGCTTGCGGGCTCTATAGTGAGATGGAATCTCAAAGTAAGGAAGCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTGCGGGCTCTATAGTGAGATGGAATCTCAAAGTAAGGAAGCAAG  200

seq1  CAAACGACCTATATAAATTTGTTTATTCGGTCTCTAAAGAAGAACACTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACGACCTATATAAATTTGTTTATTCGGTCTCTAAAGAAGAACACTTA  250

seq1  AAGACTCTTGAGACTATCCATATCCTGTCCCTTGTTGACTATAACATTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTCTTGAGACTATCCATATCCTGTCCCTTGTTGACTATAACATTTC  300

seq1  TGCCTCTTTGGAAGTCTTTTCTTTTTTTAAAATTTTATTTAAAAAATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTTTGGAAGTCTTTTCTTTTTTTAAAATTTTATTTAAAAAATAAA  350

seq1  TTTCAGTTTATTTTTAATTTATTTCTTACACTCCATATTCCATTAACCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTTTATTTTTAATTTATTTCTTACACTCCATATTCCATTAACCTT  400

seq1  CTCCCCCATCTACCCTCTGACTGCTCCACATCCCACACCTCCTCCCCGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCATCTACCCTCTGACTGCTCCACATCCCACACCTCCTCCCCGAC  450

seq1  CCACTTCACCTCCACGTGAATGCCCCCACCCCCCCACCCCACCTGACCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTCACCTCCACGTGAATGCCCCCACCCCCCCACCCCACCTGACCTC  500

seq1  TAAACTCCCTGGGGCCTCCAGTCTCTTGAGGGTTAGGTTCATCATCTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTCCCTGGGGCCTCCAGTCTCTTGAGGGTTAGGTTCATCATCTCTG  550

seq1  AATGAATACAGGCCCAGAAGTCCTCTGCTGTATGTGTGTTAGGGGTCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATACAGGCCCAGAAGTCCTCTGCTGTATGTGTGTTAGGGGTCTCA  600

seq1  TATCAGCTGGTGTATGTTGTATGTTTGGTGGTCCAGTGTTTGAGAGATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGCTGGTGTATGTTGTATGTTTGGTGGTCCAGTGTTTGAGAGATAT  650

seq1  TGGGGGGTCCAGATTAATTGAGACTGCTGGTCCTAGTACAGGATCACCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGGTCCAGATTAATTGAGACTGCTGGTCCTAGTACAGGATCACCCT  700

seq1  TCTCCTCAGCTTCCTTTAGCCTTCCCTAATTCAACAACAGGGGTCAGCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCAGCTTCCTTTAGCCTTCCCTAATTCAACAACAGGGGTCAGCTG  750

seq1  CTTCTCTCCATTGGTTGGGTGCAAATATCTGCCTTTCACTCTTTCAGCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTCCATTGGTTGGGTGCAAATATCTGCCTTTCACTCTTTCAGCCT  800

seq1  TTTGTTGGGTTTTT  814
      ||||||||| ||||
seq2  TTTGTTGGGGTTTT  814