BAC Information

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BAC

Clone NameB6Ng01-149H18
Chromosome13 (Build37)
Map Location 67,491,671 - 67,535,281
singlet/doubletdoublet
Overlap gene2810487A22Rik, Zfp459
Upstream gene2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456
Downstream geneC330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149H18.bB6Ng01-149H18.g
ACCDH945811DH945812
length9261,140
definitionDH945811|Mus musculus domesticus DNA, BAC clone: B6Ng01-149H18, 5' end.DH945812|Mus musculus domesticus DNA, BAC clone: B6Ng01-149H18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,534,356 - 67,535,281)(67,491,671 - 67,492,821)
sequence
gaattctgcaaaactcctagacagtcacaagctgattcctctgttgcttt
ttctagagcttatcactgtaagaccccccaactcatgatgtgtttctttg
gcccctagaaatgaagcccagcatggggttctttgttcttttcccctcac
cccaaaagaaaggtgactgctgggtgacccacccaggcatttgacccttt
gtgtaaagggatcaagaatgtcttacacaacttccccagtctttgttatc
taatcttcccctcactttttgggagcgatgagctgtaattcaccatcccc
gtttttttttgttgttgttgttgttgttgtttgtttgtttggttttttgt
tttttgtttttttttatgatgcttatcctatccttccctcactttatggt
tcattctttaaaaaccctcaactgcaattgctgggggtcgatctcctctg
cccctgtgtgggttataaactcggcctcagcatgctgataatatttgaat
aaacctcatgcgatattgcatcaagaacggtttctctctagttattggga
catcagctcatcccaggacttgagcgagggtctccccagaaatgggggtc
tttcaatcacatcttgcagtgtctttttctcttaccatcttggtaactca
gtacactgacaactatttcacagggtgtcagtacaggagaacaaggctcc
cttatgcatgtgcagtactggatattaagccaaatcctccttctttctag
gctagtgccttgcccctaaggaagccctcgtctgtttttccacttttgat
ttagaaactgccttcaaggtttcccctaccttgatttggactgaagaaac
ttgtgcgattacctcagagcagcttggagcatatggaggttaccaagggg
gtttccaagttattccttaaacagat
gaattctctgatgttgcttcagcattgaaagatagtaaaatgttctgcca
cagtcttcacacttgtagattttttcatcagtatgatttttcatgtgtat
aaaaagtgatgagcgagtactgaaggccttatgacactctttacacttgt
aaggtttgtctccagtgtgaagtctctgatgtatagaaagtgttttatga
gaactaagggccttaccaaattctccacacttgtagggtttctcccctat
atgatttcttctttgtgtaataaggagcgatttacaattagtcagtttgc
tgtaattgttaggatcattgggtgttattcctgttgagccaaagatgaga
tatgaacaaaagttaagcaatattcttttttattagaaggcctatttttt
aagaatgaagacattaactcatatatattaaagcataaataaaaatccac
agtatatttcaatgcgtgtggcactgaggaaaattcacaaatatagtagg
ttgaaacaatgtgtattttgactggagcaagagtataatcaaagagaaca
tagaaataatggcatattattcaaaggtaaatgcctaaataagttgtaag
gtcatttttactaccagaagtaagcctttcaagcaatatagatattatga
ggccacacatccatgaaattttaaagtagccaagcctaaacaaagaaaaa
gttaattatgattgtgtgagataggatgaacacacttttatcttaagtaa
aagatttattatgggagggtataaaagatatgttgcataacaagtacact
gtccacatcaagattaaatcatatagcctaaggatttgggacagtatttt
atgatttatactgatgaatggaaaatatatacttgagaaatattcaggca
gatataatatcaagctcacccatgagtaacagaaaatttgctggagcacg
tatgtgtcaatgaatagaatatctcaattatctatttagttaatttgttt
gggtggtcctcagattttgaagacaggttcttgagactgcctgtcctgga
aatggtacatatatgaggcttgctgtgaactctagagatctactgctaca
tgatccagtgtcgggtattatggcagccaggacaccagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67534356_67535281
seq2: B6Ng01-149H18.b_47_972 (reverse)

seq1  ATCTGTTTAA-GAATAACTTGGAAACCCCCTTGGGTAACCTTCCTTATGC  49
      |||||||||| ||||||||||||||||||||| ||||||| ||| |||||
seq2  ATCTGTTTAAGGAATAACTTGGAAACCCCCTT-GGTAACC-TCCATATGC  48

seq1  TTCCAGCTGCTCTGGAGGTAATCGCACAAGGTTCCTCAGTCCAAATC-AG  98
      | | ||||||||| |||||||||||||||| ||| |||||||||||| ||
seq2  TCCAAGCTGCTCT-GAGGTAATCGCACAAGTTTCTTCAGTCCAAATCAAG  97

seq1  GTAGGGGAAACCTTGAAGGCTGTTTCTAAATCAAAAGTGGAAAAACAGAC  148
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GTAGGGGAAACCTTGAAGGCAGTTTCTAAATCAAAAGTGGAAAAACAGAC  147

seq1  GAGGGCTTCCTTAGGGGCAAGGCACTAGCCTAGAAAGAAGGAGGCTTTGG  198
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GAGGGCTTCCTTAGGGGCAAGGCACTAGCCTAGAAAGAAGGAGGATTTGG  197

seq1  CTTAATATCCAGTACTGCACATGCATAAGGGAGCCTTGTTCTCCTGTACT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATATCCAGTACTGCACATGCATAAGGGAGCCTTGTTCTCCTGTACT  247

seq1  GACACCCTGTG-AATAGTTGTCAGTGTACTGAGTTACCAAGATGGTAAGA  297
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GACACCCTGTGAAATAGTTGTCAGTGTACTGAGTTACCAAGATGGTAAGA  297

seq1  GAAAAAGACACTGCAAGATGTGATTGAAAGACCCCCATTTCTGGGGAGAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGACACTGCAAGATGTGATTGAAAGACCCCCATTTCTGGGGAGAC  347

seq1  CCTCGCTCAAGTCCTGGGATGAGCTGATGTCCCAATAACTAGAGAGAAAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGCTCAAGTCCTGGGATGAGCTGATGTCCCAATAACTAGAGAGAAAC  397

seq1  CGTTCTTGATGCAATATCGCATGAGGTTTATTCAAATATTATCAGCATGC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCTTGATGCAATATCGCATGAGGTTTATTCAAATATTATCAGCATGC  447

seq1  TGAGGCCGAGTTTATAACCCACACAGGGGCAGAGGAGATCGACCCCCAGC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCCGAGTTTATAACCCACACAGGGGCAGAGGAGATCGACCCCCAGC  497

seq1  AATTGCAGTTGAGGGTTTTTAAAGAATGAACCATAAAGTGAGGGAAGGAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCAGTTGAGGGTTTTTAAAGAATGAACCATAAAGTGAGGGAAGGAT  547

seq1  AGGATAAGCATCATAAAAAAAAACAAAAAACAAAAAACCAAACAAACAAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAAGCATCATAAAAAAAAACAAAAAACAAAAAACCAAACAAACAAA  597

seq1  CAACAACAACAACAACAACAAAAAAAAACGGGGATGGTGAATTACAGCTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACAACAACAACAACAAAAAAAAACGGGGATGGTGAATTACAGCTC  647

seq1  ATCGCTCCCAAAAAGTGAGGGGAAGATTAGATAACAAAGACTGGGGAAGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGCTCCCAAAAAGTGAGGGGAAGATTAGATAACAAAGACTGGGGAAGT  697

seq1  TGTGTAAGACATTCTTGATCCCTTTACACAAAGGGTCAAATGCCTGGGTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAAGACATTCTTGATCCCTTTACACAAAGGGTCAAATGCCTGGGTG  747

seq1  GGTCACCCAGCAGTCACCTTTCTTTTGGGGTGAGGGGAAAAGAACAAAGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACCCAGCAGTCACCTTTCTTTTGGGGTGAGGGGAAAAGAACAAAGA  797

seq1  ACCCCATGCTGGGCTTCATTTCTAGGGGCCAAAGAAACACATCATGAGTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCATGCTGGGCTTCATTTCTAGGGGCCAAAGAAACACATCATGAGTT  847

seq1  GGGGGGTCTTACAGTGATAAGCTCTAGAAAAAGCAACAGAGGAATCAGCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGTCTTACAGTGATAAGCTCTAGAAAAAGCAACAGAGGAATCAGCT  897

seq1  TGTGACTGTCTAGGAGTTTTGCAGAATTC  926
      |||||||||||||||||||||||||||||
seq2  TGTGACTGTCTAGGAGTTTTGCAGAATTC  926

seq1: chr13_67491671_67492821
seq2: B6Ng01-149H18.g_71_1210

seq1  GAATTCTCTGATGTTGCTTCAGCATTGAAAGATAGTAAAATGTTCTGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGATGTTGCTTCAGCATTGAAAGATAGTAAAATGTTCTGCCA  50

seq1  CAGTCTTCACACTTGTAGATTTTTTCATCAGTATGATTTTTCATGTGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTCACACTTGTAGATTTTTTCATCAGTATGATTTTTCATGTGTAT  100

seq1  AAAAAGTGATGAGCGAGTACTGAAGGCCTTATGACACTCTTTACACTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTGATGAGCGAGTACTGAAGGCCTTATGACACTCTTTACACTTGT  150

seq1  AAGGTTTGTCTCCAGTGTGAAGTCTCTGATGTATAGAAAGTGTTTTATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTGTCTCCAGTGTGAAGTCTCTGATGTATAGAAAGTGTTTTATGA  200

seq1  GAACTAAGGGCCTTACCAAATTCTCCACACTTGTAGGGTTTCTCCCCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAAGGGCCTTACCAAATTCTCCACACTTGTAGGGTTTCTCCCCTAT  250

seq1  ATGATTTCTTCTTTGTGTAATAAGGAGCGATTTACAATTAGTCAGTTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTCTTCTTTGTGTAATAAGGAGCGATTTACAATTAGTCAGTTTGC  300

seq1  TGTAATTGTTAGGATCATTGGGTGTTATTCCTGTTGAGCCAAAGATGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTGTTAGGATCATTGGGTGTTATTCCTGTTGAGCCAAAGATGAGA  350

seq1  TATGAACAAAAGTTAAGCAATATTCTTTTTTATTAGAAGGCCTATTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAACAAAAGTTAAGCAATATTCTTTTTTATTAGAAGGCCTATTTTTT  400

seq1  AAGAATGAAGACATTAACTCATATATATTAAAGCATAAATAAAAATCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGAAGACATTAACTCATATATATTAAAGCATAAATAAAAATCCAC  450

seq1  AGTATATTTCAATGCGTGTGGCACTGAGGAAAATTCACAAATATAGTAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATATTTCAATGCGTGTGGCACTGAGGAAAATTCACAAATATAGTAGG  500

seq1  TTGAAACAATGTGTATTTTGACTGGAGCAAGAGTATAATCAAAGAGAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAACAATGTGTATTTTGACTGGAGCAAGAGTATAATCAAAGAGAACA  550

seq1  TAGAAATAATGGCATATTATTCAAAGGTAAATGCCTAAATAAGTTGTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATAATGGCATATTATTCAAAGGTAAATGCCTAAATAAGTTGTAAG  600

seq1  GTCA-TTTTACTACCAGAAGTAAGCCTTTCAAGCAATATAGATATTATGA  649
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTTTACTACCAGAAGTAAGCCTTTCAAGCAATATAGATATTATGA  650

seq1  GGCCACACATCCATGAAATTTTAAAGTAGCCAAGCCTAAACAAAGAAAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACACATCCATGAAATTTTAAAGTAGCCAAGCCTAAACAAAGAAAAA  700

seq1  GTTAATTATGATTGTGTGAGATAGGATGAACACACTTTTATCTTAAGTAA  749
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GTTAATTATGATTGTGTGAGATAGGATGAACACACTTTTATCTTAAGT-A  749

seq1  AAAGATTTATTAT-GGAAGGTATAAAAGATATGTTGCATAACAAGTACAC  798
      ||||||||||||| ||| ||||||||||||||||||||||||||||||||
seq2  AAAGATTTATTATGGGAGGGTATAAAAGATATGTTGCATAACAAGTACAC  799

seq1  TGTCCACATCAAGATTAAATCATATAGCCTAAGGATTTGGGACAGTATTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCACATCAAGATTAAATCATATAGCCTAAGGATTTGGGACAGTATTT  849

seq1  TATGATTTATACTGATGAATGGAAAATATATACTTGAGAAATATCAAGGC  898
      ||||||||||||||||||||||||||||||||||||||||||||  ||||
seq2  TATGATTTATACTGATGAATGGAAAATATATACTTGAGAAATATTCAGGC  899

seq1  AGAATAATAAATATCAAGCTCACCCATGAGTAACAGAAATTTTGCTGGAG  948
      || |||   |||||||||||||||||||||||||||||| ||||||||||
seq2  AG-ATA--TAATATCAAGCTCACCCATGAGTAACAGAAAATTTGCTGGAG  946

seq1  CAACGTATGTGTCAATGAATAG-ATATCTCAATTATCTA-TTAGTTATAT  996
      | |||||||||||||||||||| |||||||||||||||| |||||||  |
seq2  C-ACGTATGTGTCAATGAATAGAATATCTCAATTATCTATTTAGTTAATT  995

seq1  TGTTTGGGTGGT-CTCAGATTTTTTTGAGACAGGGTTTCTTTGTAGA-AC  1044
      |||||||||||| ||||||  ||||  |||||||  |||||    || ||
seq2  TGTTTGGGTGGTCCTCAGA--TTTTGAAGACAGG--TTCTT----GAGAC  1037

seq1  TGCCTGTCCTGGAAATTGGTACATATATGAGGCTGGCCTTGAACTC-AGA  1093
      ||||||||||||||| |||||||||||||||||| ||  ||||||| |||
seq2  TGCCTGTCCTGGAAA-TGGTACATATATGAGGCTTGCTGTGAACTCTAGA  1086

seq1  GATCTACCTGCTACCATGATTCAAGTG-CTGGTATTAATGGCAGCCAAGG  1142
      |||||| |||||| ||||| || |||| | |||||| ||||||||| |||
seq2  GATCTA-CTGCTA-CATGA-TCCAGTGTCGGGTATT-ATGGCAGCC-AGG  1131

seq1  ACACCAGTC  1151
      |||||||||
seq2  ACACCAGTC  1140