BAC Information

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BAC

Clone NameB6Ng01-151E15
Chromosome13 (Build37)
Map Location 30,369,920 - 30,371,012
singlet/doubletsinglet
Overlap genenone
Upstream geneCdkal1, E2f3, Mboat1
Downstream geneAgtr1a, Uqcrfs1, Dusp22, LOC666443, Irf4, Exoc2, Hus1b, EG432743, LOC100041257, LOC100041266
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151E15.bB6Ng01-151E15.g
ACCDH947148DH947149
length1,0811,227
definitionDH947148|Mus musculus domesticus DNA, BAC clone: B6Ng01-151E15, 5' end.DH947149|Mus musculus domesticus DNA, BAC clone: B6Ng01-151E15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaggcgccccccacccccacgcccaggggcttagcatcaattt
aattcacatcagcaaatattctgaactctgatgatatgtccagcttgtgt
tagcaactccaacatagactctggtttcaaaggctcttctgccgcagaat
accactcactatgaggagctttgtagttgcaacttaggggtcaaccaggc
agcactgacatcttacaggtgtgaaggcagacattctgaggactgtaggt
gggagtagaagatccagattccaaccttgtctggctccaaagttcacccc
atgacccccaatatctatgattagattttgccgtccctttttatctttga
gcatacatgtttttatttgcattgataaggaggaagttaaagcatttgac
gttggactatttttaaagcaagtgtcaaataataattacccccctctctc
tttgaatacattttaatgaattgaatcttagtgtcttaaattataaacca
caggttcacctcatcaaagctccaaatcaaatctgtgtgaagtggccaag
gggcttcctacagacttgcatagctgtgtagacgtcttatttaacttaaa
atttaattatttgtatgggtgcatacctggaacctgcagaagttagaaga
ggctggcgatttcctaggtttggagtcacggacagttgtgaactgccatt
tgggtgctaggatttgaacccaggtcctctggaagagtagcaagtgcttt
ttaactcctcagtcatctctctagacctcgtatccttttgacattgtgaa
gccacattacaatctacaaagctcgtgcttaaaaactgagcaattgggct
ggagagatgactcagatgttaagaacactgactgctcttccagaggtcct
gagttcaattcccagtaactacatggtggctcgtagccatctgtaatggg
atctgatgccctctcctggtgtgtctgagacagctacagtatactcacat
acataaaaaaaaaatagtaataatcttaaaaaaaacctgagccatgaact
tttaaaataaaagaaatctcatacgatgttt
gaattctttaaggacttctacctgtttagctgtgttctcctgcatttctt
taagtgagttattaatgcccttcttaaggtcctctacgagcatcatgaga
tatgattttgaatccaaatcttgcttttaggatgtgttgcggtatccagg
actggctgagttgggagtgctgggttctgatgatggtgagcggtcttggt
ttctgttggtaagattcttatgtttgcctttcgccatctggtaatctttg
gtgttagttgttatagttgtctctggctggagcctgttcctcctgtgatt
ctgttagcctctgtcagcagtcctgagagtccagctctctcctgaatctc
agtggtcagagtactctctgcaggcaagctctcctcttgcggggaaggtt
tgcagaagtctggcattcagacctgcctcctggctgaagatgaaagcccg
aaacaggccttgtcccagaagatgtgttgcctctgcagtctgggcgctca
cctgcacagactggtctccaacggacccaggacacaaaatggctccctca
cctgctccagtggtcagagccctcccaggtggtcacctctcctctggcgg
ggaaggtgcccggatgtctggagccctaaatgggggtctgtcccagaagc
tgtgttgcttctgcctgtcccagaagctgtcataatgatcttttaagaaa
ggagagtacttaaaatccatgtctgtatttattacattcaaatagaatat
ctataaagttttgtgttgagtaaataatttcattactttctcttcttcct
attcttttttaatattttcagttattatttcccaataattataaaaatga
aacaaaaagaatgaatttaaaatcacttcccatggtaatttcttccatca
cttcccatgttaatttcttctaagtgcattttggtgatgtttagtttgta
tctagggctaacagctgtcacacaccatttacttatgtcttcagaaagag
cattaactgggcagccaaggccttccacctggcctccatcagatatttca
gaagaactcaaggaacaaggagactgccatgttcttagagacctgtttgg
gaattcagctctcactgtccagtgtggttcaggtaatgtacttacttgta
ccgacggacaggaacttgatggaatatcagcagtctttctataaaccatt
acttgggaggagagacaccttctctag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_30369920_30371012
seq2: B6Ng01-151E15.b_46_1126

seq1  GAATTCACAGGCGCCCCCCACCCCCACGCCCAGGGGCTTAGCATCAATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGGCGCCCCCCACCCCCACGCCCAGGGGCTTAGCATCAATTT  50

seq1  AATTCACATCAGCAAATATTCTGAACTCTGATGATATGTCCAGCTTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCACATCAGCAAATATTCTGAACTCTGATGATATGTCCAGCTTGTGT  100

seq1  TAGCAACTCCAACATAGACTCTGGTTTCAAAGGCTCTTCTGCCGCAGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAACTCCAACATAGACTCTGGTTTCAAAGGCTCTTCTGCCGCAGAAT  150

seq1  ACCACTCACTATGAGGAGCTTTGTAGTTGCAACTTAGGGGTCAACCAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTCACTATGAGGAGCTTTGTAGTTGCAACTTAGGGGTCAACCAGGC  200

seq1  AGCACTGACATCTTACAGGTGTGAAGGCAGACATTCTGAGGACTGTAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGACATCTTACAGGTGTGAAGGCAGACATTCTGAGGACTGTAGGT  250

seq1  GGGAGTAGAAGATCCAGATTCCAACCTTGTCTGGCTCCAAAGTTCACCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTAGAAGATCCAGATTCCAACCTTGTCTGGCTCCAAAGTTCACCCC  300

seq1  ATGACCCCCAATATCTATGATTAGATTTTGCCGTCCCTTTTTATCTTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCCCCAATATCTATGATTAGATTTTGCCGTCCCTTTTTATCTTTGA  350

seq1  GCATACATGTTTTTATTTGCATTGATAAGGAGGAAGTTAAAGCATTTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACATGTTTTTATTTGCATTGATAAGGAGGAAGTTAAAGCATTTGAC  400

seq1  GTTGGACTATTTTTAAAGCAAGTGTCAAATAATAATTACCCCCCTCTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGACTATTTTTAAAGCAAGTGTCAAATAATAATTACCCCCCTCTCTC  450

seq1  TTTGAATACATTTTAATGAATTGAATCTTAGTGTCTTAAATTATAAACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATACATTTTAATGAATTGAATCTTAGTGTCTTAAATTATAAACCA  500

seq1  CAGGTTCACCTCATCAAAGCTCCAAATCAAATCTGTGTGAAGTGGCCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTCACCTCATCAAAGCTCCAAATCAAATCTGTGTGAAGTGGCCAAG  550

seq1  GGGCTTCCTACAGACTTGCATAGCTGTGTAGACGTCTTATTTAACTTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTCCTACAGACTTGCATAGCTGTGTAGACGTCTTATTTAACTTAAA  600

seq1  ATTTAATTATTTGTATGGGTGCATACCTGGAACCTGCAGAAGTTAGAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATTATTTGTATGGGTGCATACCTGGAACCTGCAGAAGTTAGAAGA  650

seq1  GGCTGGCGATTTCCTAGGTTTGGAGTCACGGACAGTTGTGAACTGCCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGCGATTTCCTAGGTTTGGAGTCACGGACAGTTGTGAACTGCCATT  700

seq1  TGGGTGCTAGGATTTGAACCCAGGTCCTCTGGAAGAGTAGCAAGTGCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGCTAGGATTTGAACCCAGGTCCTCTGGAAGAGTAGCAAGTGCTTT  750

seq1  TTAACTCCTCAGTCATCTCTCTAGACCTCGTATCCTTTTGACATTGTGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTCCTCAGTCATCTCTCTAGACCTCGTATCCTTTTGACATTGTGAA  800

seq1  GCCACATTACAATCTACAAAGCTCGTGCTTAAAAACTGAGCAATTGGGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACATTACAATCTACAAAGCTCGTGCTTAAAAACTGAGCAATTGGGCT  850

seq1  GGAGAGATGACTCAGATGTTAAGAACACTGACTGCTCTTCCAGAGGTCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGATGACTCAGATGTTAAGAACACTGACTGCTCTTCCAGAGGTCCT  900

seq1  GAGTTCAATTCCCAGTAACTACATGGTGGCTCGTAGCCATCTGTAATGGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCAATTCCCAGTAACTACATGGTGGCTCGTAGCCATCTGTAATGGG  950

seq1  ATCTGATGCCCTCTCCTGGTGTGTCTGAAGACAGCTACAGTATACTCACA  1000
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATCTGATGCCCTCTCCTGGTGTGTCTG-AGACAGCTACAGTATACTCACA  999

seq1  TACATAAAAAAAAAATAAGTAAATAAATCTTAAAAAAAAAACCTGAGCAA  1050
      |||||||||||||||| |||||   ||||||  ||||||||||||||| |
seq2  TACATAAAAAAAAAAT-AGTAA--TAATCTT--AAAAAAAACCTGAGCCA  1044

seq1  TTGAACTTTTTAAAAATTAAAAAGAAATCTCATAACGATGTTT  1093
       |||||||||  |||||  |||||||||||||| |||||||||
seq2  -TGAACTTTT--AAAAT--AAAAGAAATCTCAT-ACGATGTTT  1081