BAC Information

Click to search

BAC

Clone NameB6Ng01-151L03
Chromosome13 (Build37)
Map Location 12,383,627 - 12,518,474
singlet/doubletdoublet
Overlap geneActn2, EG432725, Heatr1, LOC546246
Upstream geneZp4, Ryr2, LOC100039678, Mtr, LOC100039826
Downstream geneLgals8, LOC100039900, Edaradd, Ero1lb, LOC664862, EG238507, LOC100039744, EG630757, Prl2c3, LOC100039999, LOC100039754, Prl2c2, LOC434483, LOC674723, Prl2c5, LOC630611, LOC100039786, LOC385049, LOC630663, LOC100040108, Gpr137b, LOC664960
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151L03.bB6Ng01-151L03.g
ACCDH947452DH947453
length1,136778
definitionDH947452|Mus musculus domesticus DNA, BAC clone: B6Ng01-151L03, 5' end.DH947453|Mus musculus domesticus DNA, BAC clone: B6Ng01-151L03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,517,321 - 12,518,474)(12,383,627 - 12,384,405)
sequence
gaattcacaacagactgaaatccagaactcagtatctgcctctaaaatag
catcctgtttggaaagaaggggaaaggtgacaacaaggcctaacaagtcc
atcagtaagcacaaactaaggacacgctcagaacacaccctgcagcagta
agtgcctttccctgtagctgtcagcagatgagaaagctatgaattccttc
agcagtagagattcaggagcgctggctcttccaaacaattggccagtcct
cccctcacatagtgcctccacaggcagcttgcagagaccctgtttcaatg
cccctctctgctgggcagagaaccaccagtgggacttcagactcgtttct
tagaaacagaaagtcaagggcccttagaagatgtttggttgctagagatg
ttctgggttgctgggcagtagtggcacacaattttaatcccagaaatcag
gaggcagtggcagatggatatctctgtggaggctagccaagtctacagag
tgagtcccaggacagtcaaggatacacagagaaatcctgtcttgaaaaac
aagcaaaccctttccttcccgatctgccattgtgggtggagccgctgcca
caatgcagatttttgtgaagacccttacagggaaaaccatcacgctcgag
gttgaaccctgggacactatagaaaatgtaaaggccacgacccaggataa
ggaaggaattcctcctcatcagcagaggctggtctttgctggtaagcagc
tggaagatggccggactttgtctgactacaacattcaaagggagtccacc
cttcatctggtgttgagacttcggggtggtgctaagagaaggaagaagaa
gtcttataccactcccaagaagaataagcataagaggaagaaggttaagt
tggctgtgctgaaatactataaggtggataaaaatggcaaaattagtcga
cttcgtcgacagtgtcctgatgaatgtgtgctggagtttcatgggaagcc
acttggacaggcattgctgtggcagtgtgtctgacttactgcttcacaaa
cagagacagtagttgtgtatgtgtaataaaggagggactcacacttaaaa
agaaggaaaacaaccaacaacaaagatgttctgtgt
gaattcaaggtcagcctggaaacatagtaagaccacgtctcaaaagaaaa
aaagaagaagaagaggaggaggaggaggaggaagaagaagaagaggaaaa
gagtggggaggtagctgagtggtggtaagcttatgtaatatgtgaaagcc
ctggggttcagcccccagtctctcaacccacaacaatggagtggttatgg
ggccatttgtgattacattcaataacgatccacactcaggaagccaaggc
ctcctcagcagaccaaggaaaatggggcaatggggaccgcagctactcac
cgacaccatcttgccctcggagggcatgaaggcgggccggttgctgatcc
gaagcttggtctgcagcgtgttgaagttgatctccagctggcacttctcc
tgcaccttggggggcttatgcttacgacggtaatcccggaagtcctccag
cttcttctgcatggcctgcatggtcttctcaggcgtcctgttctccagcc
aggggattgtgcgccgaatccactccaacagctaattttcaaacacgaga
gtggcactgaagatactagctaactgtttccagttcaagaacaaaggggc
tcgataactgggaccagctcccccaaggctcccaatgactgagcatggta
acaactgtactgacttttattggggactgcagctctatgcagggtgcatg
aatgacagtgtccacccagggccaggtgactaccccgatgagaccactca
ctggtttaattcgaactttaggttcagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_12517321_12518474
seq2: B6Ng01-151L03.b_44_1179 (reverse)

seq1  ACACAGAACATCTTTTGTTGTTTGTTTGTTTTTCTTTTTCTTTTTTAAGT  50
      |||||||||||| ||||||| ||| ||||||| |||     |||||||||
seq2  ACACAGAACATC-TTTGTTG-TTGGTTGTTTTCCTT----CTTTTTAAGT  44

seq1  GTGAGTTCCTTCTTTTTATTAACACATACACAACTACTTGTCTTCTGGTT  100
      |||||| ||| |  |||||| |||||||||||||||| |||| ||| |||
seq2  GTGAGTCCCTCC--TTTATT-ACACATACACAACTAC-TGTC-TCT-GTT  88

seq1  TGTTGAAGCAGTTAAGTCAGACAACACTTGCCACAGCAATGCCTGTCCAA  150
      || |||||||| |||||||||| |||| ||||||||||||||||||||||
seq2  TG-TGAAGCAG-TAAGTCAGAC-ACAC-TGCCACAGCAATGCCTGTCCAA  134

seq1  GTGGCTTCCCATGAAAACTCCAGCACCACATTCATCAGGACACTGTCGAC  200
      ||||||||||||| ||||||||||| ||||||||||||||||||||||||
seq2  GTGGCTTCCCATG-AAACTCCAGCA-CACATTCATCAGGACACTGTCGAC  182

seq1  GAAGTCGACTAATTTTGCCATTTTTATCCACCTTATAGTATTTCAGCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCGACTAATTTTGCCATTTTTATCCACCTTATAGTATTTCAGCACA  232

seq1  GCCAACTTAACCTTCTTCCTCTTATGCTTATTCTTCTTGGGAGTGGTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACTTAACCTTCTTCCTCTTATGCTTATTCTTCTTGGGAGTGGTATA  282

seq1  AGACTTCTTCTTCCTTCTCTTAGCACCACCCCGAAGTCTCAACACCAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTCTTCTTCCTTCTCTTAGCACCACCCCGAAGTCTCAACACCAGAT  332

seq1  GAAGGGTGGACTCCCTTTGAATGTTGTAGTCAGACAAAGTCCGGCCATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGTGGACTCCCTTTGAATGTTGTAGTCAGACAAAGTCCGGCCATCT  382

seq1  TCCAGCTGCTTACCAGCAAAGACCAGCCTCTGCTGATGAGGAGGAATTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTGCTTACCAGCAAAGACCAGCCTCTGCTGATGAGGAGGAATTCC  432

seq1  TTCCTTATCCTGGGTCGTGGCCTTTACATTTTCTATAGTGTCCCAGGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTATCCTGGGTCGTGGCCTTTACATTTTCTATAGTGTCCCAGGGTT  482

seq1  CAACCTCGAGCGTGATGGTTTTCCCTGTAAGGGTCTTCACAAAAATCTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTCGAGCGTGATGGTTTTCCCTGTAAGGGTCTTCACAAAAATCTGC  532

seq1  ATTGTGGCAGCGGCTCCACCCACAATGGCAGATCGGGAAGGAAAGGGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGGCAGCGGCTCCACCCACAATGGCAGATCGGGAAGGAAAGGGTTT  582

seq1  GCTTGTTTTTCAAGACAGGATTTCTCTGTGTATCCTTGACTGTCCTGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTTTTTCAAGACAGGATTTCTCTGTGTATCCTTGACTGTCCTGGGA  632

seq1  CTCACTCTGTAGACTTGGCTAGCCTCCACAGAGATATCCATCTGCCACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTCTGTAGACTTGGCTAGCCTCCACAGAGATATCCATCTGCCACTG  682

seq1  CCTCCTGATTTCTGGGATTAAAATTGTGTGCCACTACTGCCCAGCAACCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGATTTCTGGGATTAAAATTGTGTGCCACTACTGCCCAGCAACCC  732

seq1  AGAACATCTCTAGCAACCAAACATCTTCTAAGGGCCCTTGACTTTCTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATCTCTAGCAACCAAACATCTTCTAAGGGCCCTTGACTTTCTGTT  782

seq1  TCTAAGAAACGAGTCTGAAGTCCCACTGGTGGTTCTCTGCCCAGCAGAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGAAACGAGTCTGAAGTCCCACTGGTGGTTCTCTGCCCAGCAGAGA  832

seq1  GGGGCATTGAAACAGGGTCTCTGCAAGCTGCCTGTGGAGGCACTATGTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCATTGAAACAGGGTCTCTGCAAGCTGCCTGTGGAGGCACTATGTGA  882

seq1  GGGGAGGACTGGCCAATTGTTTGGAAGAGCCAGCGCTCCTGAATCTCTAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGACTGGCCAATTGTTTGGAAGAGCCAGCGCTCCTGAATCTCTAC  932

seq1  TGCTGAAGGAATTCATAGCTTTCTCATCTGCTGACAGCTACAGGGAAAGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAAGGAATTCATAGCTTTCTCATCTGCTGACAGCTACAGGGAAAGG  982

seq1  CACTTACTGCTGCAGGGTGTGTTCTGAGCGTGTCCTTAGTTTGTGCTTAC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTACTGCTGCAGGGTGTGTTCTGAGCGTGTCCTTAGTTTGTGCTTAC  1032

seq1  TGATGGACTTGTTAGGCCTTGTTGTCACCTTTCCCCTTCTTTCCAAACAG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGACTTGTTAGGCCTTGTTGTCACCTTTCCCCTTCTTTCCAAACAG  1082

seq1  GATGCTATTTTAGAGGCAGATACTGAGTTCTGGATTTCAGTCTGTTGTGA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTATTTTAGAGGCAGATACTGAGTTCTGGATTTCAGTCTGTTGTGA  1132

seq1  ATTC  1154
      ||||
seq2  ATTC  1136

seq1: chr13_12383627_12384405
seq2: B6Ng01-151L03.g_69_846

seq1  GAATTCAAGGTCAGCCTGGAAACATAGTAAGACCACGTCTCAAAAGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGTCAGCCTGGAAACATAGTAAGACCACGTCTCAAAAGAAAA  50

seq1  AAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAGGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAGGAAAA  100

seq1  GAGTGGGGAGGTAGCTGAGTGGTGGTAAGCTTATGTAATATGTGAAAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGGGAGGTAGCTGAGTGGTGGTAAGCTTATGTAATATGTGAAAGCC  150

seq1  CTGGGGTTCAGCCCCCAGTCTCTCAACCCACAACAATGGAGTGGTTATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGTTCAGCCCCCAGTCTCTCAACCCACAACAATGGAGTGGTTATGG  200

seq1  GGCCATTTGTGATTACATTCAATAACGATCCACACTCAGGAAGCCAAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATTTGTGATTACATTCAATAACGATCCACACTCAGGAAGCCAAGGC  250

seq1  CTCCTCAGCAGACCAAGGAAAATGGGGCAATGGGGACCGCAGCTACTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCAGCAGACCAAGGAAAATGGGGCAATGGGGACCGCAGCTACTCAC  300

seq1  CGACACCATCTTGCCCTCGGAGGGCATGAAGGCGGGCCGGTTGCTGATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACACCATCTTGCCCTCGGAGGGCATGAAGGCGGGCCGGTTGCTGATCC  350

seq1  GAAGCTTGGTCTGCAGCGTGTTGAAGTTGATCTCCAGCTGGCACTTCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTTGGTCTGCAGCGTGTTGAAGTTGATCTCCAGCTGGCACTTCTCC  400

seq1  TGCACCTTGGGGGGCTTATGCTTACGACGGTAATCCCGGAAGTCCTCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCTTGGGGGGCTTATGCTTACGACGGTAATCCCGGAAGTCCTCCAG  450

seq1  CTTCTTCTGCATGGCCTGCATGGTCTTCTCAGGCGTCCTGTTCTCCAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCTGCATGGCCTGCATGGTCTTCTCAGGCGTCCTGTTCTCCAGCC  500

seq1  AGGGGATTGTGCGCCGAATCCACTCCAACAGCTAATTTTCAAACACGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGATTGTGCGCCGAATCCACTCCAACAGCTAATTTTCAAACACGAGA  550

seq1  GTGGCACTGAAGATACTAGCTAACTGTTTCCAGTTCAAGAACAAAGGGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCACTGAAGATACTAGCTAACTGTTTCCAGTTCAAGAACAAAGGGGC  600

seq1  CCGATAACTGGGACCAGCTCCCCCAAGGCTCCCAATGACTGAGCATGGTA  650
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATAACTGGGACCAGCTCCCCCAAGGCTCCCAATGACTGAGCATGGTA  650

seq1  ACAACTGTACTGACTTAAATTGGGGACTGCAGCTCTATGCATGGTGCAAT  700
      ||||||||||||||||  ||||||||||||||||||||||| ||||| ||
seq2  ACAACTGTACTGACTTTTATTGGGGACTGCAGCTCTATGCAGGGTGC-AT  699

seq1  GAATGACAGTGTCCACCCAGGGCCACGGTGACCACCCCGATGAGACCACA  750
      ||||||||||||||||||||||||| |||||| |||||||||||||||| 
seq2  GAATGACAGTGTCCACCCAGGGCCA-GGTGACTACCCCGATGAGACCACT  748

seq1  CACAGGTTTAACTCGAACTTCAGG-TCAGC  779
      ||| ||||||| |||||||| ||| |||||
seq2  CACTGGTTTAATTCGAACTTTAGGTTCAGC  778