BAC Information

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BAC

Clone NameB6Ng01-151M04
Chromosome13 (Build37)
Map Location 118,926,493 - 119,029,437
singlet/doubletdoublet
Overlap genenone
Upstream geneEmb, EG623365, LOC382807, Hcn1, LOC100041695, LOC674926
Downstream geneMrps30, LOC668309, LOC100041278, Fgf10, LOC100041298
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151M04.bB6Ng01-151M04.g
ACCDH947499DH947500
length1,186655
definitionDH947499|Mus musculus domesticus DNA, BAC clone: B6Ng01-151M04, 5' end.DH947500|Mus musculus domesticus DNA, BAC clone: B6Ng01-151M04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,028,258 - 119,029,437)(118,926,493 - 118,927,041)
sequence
gaattccagtgaatatatgttatcttatgtatattatatacattacagag
acatattcccatatgctgaatacatttcaaacatgaatgataattgggtt
tactaatgactgtggaaatcacactccctgtatacttcaagcctttgttt
acttccttttaacgaagtagttattctagggatagagaggagtaaattag
ggaagaatgccatgcagagaataatgactgagagataaggccaaaatgaa
caaaaggcggaacctagtcactccatccttttccctttctctctttccct
ctaacctactccagcccctctctgtacatgctggacacaaagtctttgta
tgtacttctttctcccccaggaagcttctcattaccctctgtgtcccaca
taaagctgctttctcattttcctctaaagaaagagccattcttgagtttt
ctgactgataagctctcaacaataaaccgcatatatccttcaaaggaccc
tatgcctctctttggggatttactaagagtctagttctccttgtgatggt
atgataacttatcatccctgaatggtgtccactcagcacatgctatctga
gtgcaggcagagtatctgatggttagtgtttgcccagtagattcatcaaa
atgccagatgaaatttgcctacattgagatgctatgcacattttctcatt
tttcagtccttccataatttattgcatcagctgtccttggcctgggcccc
tgcttctagtggcattttgattgtgattttgaaaagaaaaagaaataaat
tgattgaaatgaccctatattgtgttttcatattagttttagagagacaa
ccaaaacttgttactcttagtgattaatgatcacaatggactatatccta
gtgcttttattagtaaaattattattaaatgcttgacttataaaaaatta
atattacaaataatagatatgaacttgaaaatacaaatcctgcttcagtg
atgaaaagtgcaacctttccttagcaaccgatgtcccatttatacacttt
cctgtgggggattcttcactgttctccaaggtaaccgtattttaaaccta
atggataatatcccctataatctaagatatatttgcctttcacaagaata
tatctcacttgcctagaggtttagtttagtatctaa
gaattcaaatatgaggtagcatcatggaggaatgatccctttcgagggct
gccatgcactccagtcaagtctgcttgacaggctgaaaagtctggaagca
ctcatgaggaaaagagtttcaaggaaactcacctcctggagctttggcgt
tctcattaacccatatactcataccctattcctgcgttagtctggtgtat
agatccacgtgctctcttttagtattattttattataagtgttttttaag
attaaattctgatatggttaagtctccccagtgttccaaggtcccagaag
ccaaggagcttggaatctggcaggaatgcagtaagaaagttacctattca
gtaactaattaagcattacaaaagatgaagccagtatctcagagctggtc
tgcaaagtatttaccaaagacagtagcaaatctcacccaaacaagggaat
aagagagctagggaatcccactgagacagagatcttctctacagctaggt
atagcaagcttcatattagaagcaagttggtagattcttctgtagaccca
ggaaatagaggggttggggtattgcagtattaatgaaaaggtctgccagt
gcagaacccctggtggtgggcttaacaataaactagctttacacctggct
ccctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_119028258_119029437
seq2: B6Ng01-151M04.b_43_1228 (reverse)

seq1  TTAGATACTAAACTAAACCCTCATGCAAGTGAGATATAT--CTGTGAAAA  48
      |||||||||||||||||||   | |||||||||||||||   |||| |||
seq2  TTAGATACTAAACTAAACCTCTAGGCAAGTGAGATATATTCTTGTG-AAA  49

seq1  GGCAAATATA-CTAAAAATATAGAGAATAATATACAATAAGTTTAAGATA  97
      |||||||||| || | | ||||| | ||| ||| || || |||||| |||
seq2  GGCAAATATATCTTAGATTATAGGGGATATTATCCATTAGGTTTAAAATA  99

seq1  CGGTTACCTTGGAG-ACAGTG-AGAAT-CACCACAGG-AAGTGTATAGAT  143
      |||||||||||||| |||||| ||||| | ||||||| ||||||||| ||
seq2  CGGTTACCTTGGAGAACAGTGAAGAATCCCCCACAGGAAAGTGTATAAAT  149

seq1  GGGACATCGGTTGCTAAGGAAAGGTTGCACTTTTCATCACTGAAGCAGGA  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACATCGGTTGCTAAGGAAAGGTTGCACTTTTCATCACTGAAGCAGGA  199

seq1  TTTGTATTTTCAAGTTCATATCTATTATTTGTAATATTAATTTTTTATAA  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATTTTCAAGTTCATATCTATTATTTGTAATATTAATTTTTTATAA  249

seq1  GTCAAGCATTTAATAATAATTTTACTAATAAAAGCACTAGGATATAGTCC  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGCATTTAATAATAATTTTACTAATAAAAGCACTAGGATATAGTCC  299

seq1  ATTGTGATCATTAATCACTAAGAGTAACAAGTTTTGGTTGTCTCTCTAAA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGATCATTAATCACTAAGAGTAACAAGTTTTGGTTGTCTCTCTAAA  349

seq1  ACTAATATGAAAACACAATATAGGGTCATTTCAATCAATTTATTTCTTTT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATATGAAAACACAATATAGGGTCATTTCAATCAATTTATTTCTTTT  399

seq1  TCTTTTCAAAATCACAATCAAAATGCCACTAGAAGCAGGGGCCCAGGCCA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCAAAATCACAATCAAAATGCCACTAGAAGCAGGGGCCCAGGCCA  449

seq1  AGGACAGCTGATGCAATAAATTATGGAAGGACTGAAAAATGAGAAAATGT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGCTGATGCAATAAATTATGGAAGGACTGAAAAATGAGAAAATGT  499

seq1  GCATAGCATCTCAATGTAGGCAAATTTCATCTGGCATTTTGATGAATCTA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGCATCTCAATGTAGGCAAATTTCATCTGGCATTTTGATGAATCTA  549

seq1  CTGGGCAAACACTAACCATCAGATACTCTGCCTGCACTCAGATAGCATGT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCAAACACTAACCATCAGATACTCTGCCTGCACTCAGATAGCATGT  599

seq1  GCTGAGTGGACACCATTCAGGGATGATAAGTTATCATACCATCACAAGGA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGTGGACACCATTCAGGGATGATAAGTTATCATACCATCACAAGGA  649

seq1  GAACTAGACTCTTAGTAAATCCCCAAAGAGAGGCATAGGGTCCTTTGAAG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAGACTCTTAGTAAATCCCCAAAGAGAGGCATAGGGTCCTTTGAAG  699

seq1  GATATATGCGGTTTATTGTTGAGAGCTTATCAGTCAGAAAACTCAAGAAT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATGCGGTTTATTGTTGAGAGCTTATCAGTCAGAAAACTCAAGAAT  749

seq1  GGCTCTTTCTTTAGAGGAAAATGAGAAAGCAGCTTTATGTGGGACACAGA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTTTCTTTAGAGGAAAATGAGAAAGCAGCTTTATGTGGGACACAGA  799

seq1  GGGTAATGAGAAGCTTCCTGGGGGAGAAAGAAGTACATACAAAGACTTTG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAATGAGAAGCTTCCTGGGGGAGAAAGAAGTACATACAAAGACTTTG  849

seq1  TGTCCAGCATGTACAGAGAGGGGCTGGAGTAGGTTAGAGGGAAAGAGAGA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGCATGTACAGAGAGGGGCTGGAGTAGGTTAGAGGGAAAGAGAGA  899

seq1  AAGGGAAAAGGATGGAGTGACTAGGTTCCGCCTTTTGTTCATTTTGGCCT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAAAGGATGGAGTGACTAGGTTCCGCCTTTTGTTCATTTTGGCCT  949

seq1  TATCTCTCAGTCATTATTCTCTGCATGGCATTCTTCCCTAATTTACTCCT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTCAGTCATTATTCTCTGCATGGCATTCTTCCCTAATTTACTCCT  999

seq1  CTCTATCCCTAGAATAACTACTTCGTTAAAAGGAAGTAAACAAAGGCTTG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATCCCTAGAATAACTACTTCGTTAAAAGGAAGTAAACAAAGGCTTG  1049

seq1  AAGTATACAGGGAGTGTGATTTCCACAGTCATTAGTAAACCCAATTATCA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATACAGGGAGTGTGATTTCCACAGTCATTAGTAAACCCAATTATCA  1099

seq1  TTCATGTTTGAAATGTATTCAGCATATGGGAATATGTCTCTGTAATGTAT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTTTGAAATGTATTCAGCATATGGGAATATGTCTCTGTAATGTAT  1149

seq1  ATAATATACATAAGATAACATATATTCACTGGAATTC  1180
      |||||||||||||||||||||||||||||||||||||
seq2  ATAATATACATAAGATAACATATATTCACTGGAATTC  1186

seq1: chr13_118926493_118927041
seq2: B6Ng01-151M04.g_68_616

seq1  GAATTCAAATATGAGGTAGCATCATGGAGGAATGATCCCTTTCGAGGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATATGAGGTAGCATCATGGAGGAATGATCCCTTTCGAGGGCT  50

seq1  GCCATGCACTCCAGTCAAGTCTGCTTGACAGGCTGAAAAGTCTGGAAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGCACTCCAGTCAAGTCTGCTTGACAGGCTGAAAAGTCTGGAAGCA  100

seq1  CTCATGAGGAAAAGAGTTTCAAGGAAACTCACCTCCTGGAGCTTTGGCGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGAGGAAAAGAGTTTCAAGGAAACTCACCTCCTGGAGCTTTGGCGT  150

seq1  TCTCATTAACCCATATACTCATACCCTATTCCTGCGTTAGTCTGGTGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTAACCCATATACTCATACCCTATTCCTGCGTTAGTCTGGTGTAT  200

seq1  AGATCCACGTGCTCTCTTTTAGTATTATTTTATTATAAGTGTTTTTTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCACGTGCTCTCTTTTAGTATTATTTTATTATAAGTGTTTTTTAAG  250

seq1  ATTAAATTCTGATATGGTTAAGTCTCCCCAGTGTTCCAAGGTCCCAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATTCTGATATGGTTAAGTCTCCCCAGTGTTCCAAGGTCCCAGAAG  300

seq1  CCAAGGAGCTTGGAATCTGGCAGGAATGCAGTAAGAAAGTTACCTATTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGAGCTTGGAATCTGGCAGGAATGCAGTAAGAAAGTTACCTATTCA  350

seq1  GTAACTAATTAAGCATTACAAAAGATGAAGCCAGTATCTCAGAGCTGGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTAATTAAGCATTACAAAAGATGAAGCCAGTATCTCAGAGCTGGTC  400

seq1  TGCAAAGTATTTACCAAAGACAGTAGCAAATCTCACCCAAACAAGGGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAGTATTTACCAAAGACAGTAGCAAATCTCACCCAAACAAGGGAAT  450

seq1  AAGAGAGCTAGGGAATCCCACTGAGACAGAGATCTTCTCTACAGCTAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGCTAGGGAATCCCACTGAGACAGAGATCTTCTCTACAGCTAGGT  500

seq1  ATAGCAAGCTTCATATTAGAAGCAAGTTGGTAGATTCTTCTGTAGACCC  549
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAAGCTTCATATTAGAAGCAAGTTGGTAGATTCTTCTGTAGACCC  549