BAC Information

Click to search

BAC

Clone NameB6Ng01-151P07
Chromosome13 (Build37)
Map Location 118,676,570 - 118,677,697
singlet/doubletsinglet
Overlap geneHcn1
Upstream geneParp8, LOC668288, LOC623312, Emb, EG623365, LOC382807
Downstream geneLOC100041695, LOC674926, Mrps30, LOC668309, LOC100041278, Fgf10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151P07.bB6Ng01-151P07.g
ACCDH947649DH947650
length1,1431,121
definitionDH947649|Mus musculus domesticus DNA, BAC clone: B6Ng01-151P07, 5' end.DH947650|Mus musculus domesticus DNA, BAC clone: B6Ng01-151P07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaatgcattcaatagtccatcagggagacatagatctccatagg
tttctctccagtctatggttaactgttgatctcacagcttctgtgaggtc
atgtcgtgactgctgtgccatgctgggacttcaccctatcacagcccttc
cctgtcttctggatgctacattcttaataccaccagttctgtctcatcta
ggatgatccatgagccttatgggaaatgatacatgtgccctgtttctggc
tgaacattcaaccagcagttattcttagcatcttgagcagccatatgtct
cattgcaaagggtagcctctcttgttaaggttgggattagtttgtgtaaa
ggcatataaataaataaaatgaaggctgcttaataagatgacaatttaac
aacaataagtacaccactatggtccaagacctcatccaatggcttttaat
aacatttacaatagcaaacataaattcttgtggcatggaccacagatcaa
gtcagagaatggttgcctacctttgactactatgccatgaatgcatcaat
aggcacattttgtggcatgttggttttgtagttcatagtgttcacagctg
ggtaaagcaatctatgcctctgcaccccatgacctgtgaaatatgtgcac
tatcatctgttactataaaagctaagcactaggaagagctttctttcttt
ctttctttctttctttctttctttctttcttttttttttttttttttttt
tttgggtttttcaagacagggtttctctgtatagccctggctgtcctgga
actcacttttgtagaccaggctggcctcgaactcagaaatttgccttcct
ctgcctcccgagtgctgggattaaaggtgtgcaccacacacctggcagag
agctttcttaatttccctatatcttgtctctgaaattggtttaccattag
ttctttgggcaacagagaatggcattgctgtgtgttttgtgctctggaca
gcgtcatgagaggcatccatgcctgccttggttcttttatattctggtta
ggatcaagtatccaatctagaattccgtattctgcctgaaacctatatgc
tcaacgtcaactcatcatctagtattctctggtgcatctccag
gaattcattttcacaggttttagatctagttagtaaatgtcagggataaa
gacagttctctgaattcttaatgaacagtcttttccattatcaccaacac
caccctactatttggtatagtttattattctttgctatttaccggttctt
ggggtgtatttctcttacctgtaataatttataaggcagagcaaccattt
tttacatttctggataaagaaggactgtggctagaaagtaaactcttcac
tctggacctaaagtatactgcatctgaaactgaagctgggtttggagcca
ggcgatgttagaacacattctccagccctcataaggaagataaatacact
tcaaacaatatggggtaagagacagttctctgtgccactaaccatgaatc
catccatgctaaaaataaactccatggttttcctcctccttctaccccat
ttaacgcaataattattttcacctgaaacattatctcctgccaatgtctc
ctctacactaatatatgttaatctcactgatatatccttacacttttact
tcctgaggtcactatttaaacaataattataaagtaaatataaagtaatc
cttatgctctatcttggttttgtctatttctattgaaataatattaaaga
tatcaaatataatggtttgattaaagttttgaaagctgatacaaaaatta
gtaaacttttacaaacaaaattaattcaaagtaatgatgcaattcttatg
aagtgatatatacatatatataggctgtaacaacatgggtgttgaatgcc
cccacaaatatcataattagagacttgcacaccccaccaaagggaatata
atgaggtggagtaacttgaagatatgggacctggcaggtgatttttagcc
actttatagacttactctggaagtgtgtagttgaatgttgatttttcttt
cctttgcttcctggctagaagatttttgctttgccttctttttctttact
acacattgacactgatttgctatctcaccgaaggcctaagcaaagggtct
gactagtcagactcagacttttaaaccagatagcctatcagcatcacctt
ttaattctgtatacattaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_118676570_118677697
seq2: B6Ng01-151P07.g_68_1188 (reverse)

seq1  TTTTAATGTATACAGA--TATAAAGTGATTTGGCTGATA-GCTATTCTGG  47
      ||||||||||||||||  || || |||||   ||||||| |||| |||||
seq2  TTTTAATGTATACAGAATTAAAAGGTGAT---GCTGATAGGCTA-TCTGG  46

seq1  TTTTAGAAGTTCTGAGTCTTGACTAGTCAGACCCTTTGCTTTTAGGCCTT  97
       |||| ||| |||||||| ||||||||||||||||||||  |||||||||
seq2  -TTTAAAAG-TCTGAGTC-TGACTAGTCAGACCCTTTGC--TTAGGCCTT  91

seq1  CGGTGAGATAGCAAATCAGTGTCATATGTGTAGTAAAGAAAAAGAAGGCA  147
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CGGTGAGATAGCAAATCAGTGTCA-ATGTGTAGTAAAGAAAAAGAAGGCA  140

seq1  AAGCAAAAATCTTCTAGCCAGGAAGCAAAGGAAAGAAAAATCAACATTCA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAAATCTTCTAGCCAGGAAGCAAAGGAAAGAAAAATCAACATTCA  190

seq1  ACTACACACTTCCAGAGTAAGTCTATAAAGTGGCTAAAAATCACCTGCCA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACACACTTCCAGAGTAAGTCTATAAAGTGGCTAAAAATCACCTGCCA  240

seq1  GGTCCCATATCTTCAAGTTACTCCACCTCATTATATTCCCTTTGGTGGGG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCATATCTTCAAGTTACTCCACCTCATTATATTCCCTTTGGTGGGG  290

seq1  TGTGCAAGTCTCTAATTATGATATTTGTGGGGGCATTCAACACCCATGTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAAGTCTCTAATTATGATATTTGTGGGGGCATTCAACACCCATGTT  340

seq1  GTTACAGCCTATATATATGTATATATCACTTCATAAGAATTGCATCATTA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAGCCTATATATATGTATATATCACTTCATAAGAATTGCATCATTA  390

seq1  CTTTGAATTAATTTTGTTTGTAAAAGTTTACTAATTTTTGTATCAGCTTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAATTAATTTTGTTTGTAAAAGTTTACTAATTTTTGTATCAGCTTT  440

seq1  CAAAACTTTAATCAAACCATTATATTTGATATCTTTAATATTATTTCAAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTTTAATCAAACCATTATATTTGATATCTTTAATATTATTTCAAT  490

seq1  AGAAATAGACAAAACCAAGATAGAGCATAAGGATTACTTTATATTTACTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAGACAAAACCAAGATAGAGCATAAGGATTACTTTATATTTACTT  540

seq1  TATAATTATTGTTTAAATAGTGACCTCAGGAAGTAAAAGTGTAAGGATAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTATTGTTTAAATAGTGACCTCAGGAAGTAAAAGTGTAAGGATAT  590

seq1  ATCAGTGAGATTAACATATATTAGTGTAGAGGAGACATTGGCAGGAGATA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTGAGATTAACATATATTAGTGTAGAGGAGACATTGGCAGGAGATA  640

seq1  ATGTTTCAGGTGAAAATAATTATTGCGTTAAATGGGGTAGAAGGAGGAGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCAGGTGAAAATAATTATTGCGTTAAATGGGGTAGAAGGAGGAGG  690

seq1  AAAACCATGGAGTTTATTTTTAGCATGGATGGATTCATGGTTAGTGGCAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCATGGAGTTTATTTTTAGCATGGATGGATTCATGGTTAGTGGCAC  740

seq1  AGAGAACTGTCTCTTACCCCATATTGTTTGAAGTGTATTTATCTTCCTTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACTGTCTCTTACCCCATATTGTTTGAAGTGTATTTATCTTCCTTA  790

seq1  TGAGGGCTGGAGAATGTGTTCTAACATCGCCTGGCTCCAAACCCAGCTTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGCTGGAGAATGTGTTCTAACATCGCCTGGCTCCAAACCCAGCTTC  840

seq1  AGTTTCAGATGCAGTATACTTTAGGTCCAGAGTGAAGAGTTTACTTTCTA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCAGATGCAGTATACTTTAGGTCCAGAGTGAAGAGTTTACTTTCTA  890

seq1  GCCACAGTCCTTCTTTATCCAGAAATGTAAAAAATGGTTGCTCTGCCTTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAGTCCTTCTTTATCCAGAAATGTAAAAAATGGTTGCTCTGCCTTA  940

seq1  TAAATTATTACAGGTAAGAGAAATACACCCCAAGAACCGGTAAATAGCAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTATTACAGGTAAGAGAAATACACCCCAAGAACCGGTAAATAGCAA  990

seq1  AGAATAATAAACTATACCAAATAGTAGGGTGGTGTTGGTGATAATGGAAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAATAAACTATACCAAATAGTAGGGTGGTGTTGGTGATAATGGAAA  1040

seq1  AGACTGTTCATTAAGAATTCAGAGAACTGTCTTTATCCCTGACATTTACT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTTCATTAAGAATTCAGAGAACTGTCTTTATCCCTGACATTTACT  1090

seq1  AACTAGATCTAAAACCTGTGAAAATGAATTC  1128
      |||||||||||||||||||||||||||||||
seq2  AACTAGATCTAAAACCTGTGAAAATGAATTC  1121