BAC Information

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BAC

Clone NameB6Ng01-152B14
Chromosome13 (Build37)
Map Location 5,550,176 - 5,679,997
singlet/doubletdoublet
Overlap genenone
Upstream geneAkr1c21, Akr1e1, EG432721, EG432723
Downstream gene1700016G22Rik, Klf6, LOC100039388, LOC100039395, Pitrm1, Pfkp, LOC100039532
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152B14.bB6Ng01-152B14.g
ACCDH947757DH947758
length1,1131,091
definitionDH947757|Mus musculus domesticus DNA, BAC clone: B6Ng01-152B14, 5' end.DH947758|Mus musculus domesticus DNA, BAC clone: B6Ng01-152B14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(5,550,176 - 5,550,879)(5,678,900 - 5,679,997)
sequence
gaattcttttgcagcctttggaaaaaaaaaatgtttgcttgctttcactt
ctgaatccagatgctgattcatagaataatctaaagtaaacctggagtaa
atgactgggttgataatgtaaaataaaagacaagacctgtgttctgcagg
aggtgagctattcagagaactttttaggaaaaaaaacagaaaactgcttg
gagaactgacaaagagacaggtgcgcacgcgcacacacacacacacacac
acacacacacacacacacacaaggaagcaggacatggacagagagatctc
ttagaatagcaagcaagcagaatatagacagagaaatctccagagagaaa
gcagaacgtagaaagcagactggaaaagttgtatcaaacagaagaccagt
ggtcagcttggaaccaccaattgactttgagactttgagtccttcttttc
gctgctcccagataccctgtacttactggatggttttgtttgccaatttg
acacaagctggagttatcacagagaaaagagcctcccttgagtaaatgcc
tccttgagattcagctgtaaggcattttctcaattagtgatcaaggtggg
aaagcccattatgggtggggccatccctgggcaggtagtcctggtttcta
taaaaaagcaggctgaacaagccaggggaagcaagcagcacccctctgtg
gcctctgtatcagctcctgcctccaaattcctgccctgtgagtcccagac
ctgacctcctttggtgatgaacagcagtgtgaaagtgtaagctgaataaa
ccctttcctccccaaattgcctcttggtcatgatgttttgtacaagatac
aaccctgactaagacacgccccttctctcagaacctcctccatgctgagg
ctggtccttggcaacaagggaagtctgcccgttcccctccacactgaggc
tttgggatccgtgacatactatgccgatgtcaaggatatacatgcactga
gactgcacacactcagggcttccttcacacccccacactagaattagcaa
ggaggattgatttagaccaggctaatctctcttttactccttctatgggg
ttaaatttctgtg

gaattcagcatgagtcatgcttgctctcaggtatgtttctgccactacag
gagactggtgactttgcaaattggactttatccttttataaattagagta
tgtgcaaaggattttagttttaaatttctttagacactctatatgtagcc
atcctactcaaagatgtaaaagaatatggagtttgatttatctgtgctta
aaaaccttcatatccaactgtagaaatgaacaaatttacagttaaacttc
tcaagacattattgttttgtgaattctgcatacaaaaaataccctgtaag
tcactaaacacgagccttcatgccttttcacagagctggagctgatgatc
aaaaccacacccataggaaatgaaaagtgttaggtcactacaggatttct
agaagcttatcaagtttcttgacttctcagatacaatttgtctcatgtgt
agttttcaagaaaatttttgatgcagtgcagtagatttgctctacaataa
aacatccaaatatatcatctttctgcttaatgaatcacaaaaggagctgt
gtctcattccagcaataggcatcctcttgccatcttcggtagccagttct
tctgtgctcaccacatcttatgaaagatctgtcctggcactagatgcaag
ttccaagtggacgattttagggaaaaataaagtcagaagcctggaaactg
aggcataaaacatcatcctggctactattggaagagggctgaggatatgt
gatggaaacataccttttataaggtatatatacatatatatgctgttcta
ctgatggtgctgctctattcaagttcaaggaccattcattttactagagc
ttacactctccaaggagacaggattaaagaagaaacataaatggaagcat
attttggcatggaattgccctttgtataagcagttgacaaccatgtatgc
aaacggttcatagcctatattcaggtacaggaaatgactcaaaccactga
aacaattttgtttcgaaatctatctaatagtagtgatcataaaccttatc
taaaggttattttcagatgtcagtatttactcccaagggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_5550176_5550879
seq2: B6Ng01-152B14.b_462_1159

seq1  ACCAATTGACTTTGAGACTTTGAGTCCTTCTTTTCGCTGCTCCCAGATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATTGACTTTGAGACTTTGAGTCCTTCTTTTCGCTGCTCCCAGATAC  50

seq1  CCTGTACTTACTGGATGGTTTTGTTTGCCAATTTGACACAAGCTGGAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTACTTACTGGATGGTTTTGTTTGCCAATTTGACACAAGCTGGAGTT  100

seq1  ATCACAGAGAAAAGAGCCTCCCTTGAGTAAATGCCTCCTTGAGATTCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGAGAAAAGAGCCTCCCTTGAGTAAATGCCTCCTTGAGATTCAGC  150

seq1  TGTAAGGCATTTTCTCAATTAGTGATCAAGGTGGGAAAGCCCATTATGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGGCATTTTCTCAATTAGTGATCAAGGTGGGAAAGCCCATTATGGG  200

seq1  TGGGGCCATCCCTGGGCAGGTAGTCCTGGTTTCTATAAAAAAGCAGGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCCATCCCTGGGCAGGTAGTCCTGGTTTCTATAAAAAAGCAGGCTG  250

seq1  AACAAGCCAGGGGAAGCAAGCAGCACCCCTCTGTGGCCTCTGTATCAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGCCAGGGGAAGCAAGCAGCACCCCTCTGTGGCCTCTGTATCAGCT  300

seq1  CCTGCCTCCAAATTCCTGCCCTGTGAGTCCCAGACCTGACCTCCTTTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTCCAAATTCCTGCCCTGTGAGTCCCAGACCTGACCTCCTTTGGT  350

seq1  GATGAACAGCAGTGTGAAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAACAGCAGTGTGAAAGTGTAAGCTGAATAAACCCTTTCCTCCCCAA  400

seq1  ATTGCCTCTTGGTCATGATGTTTTGTACAAGAATACAAACCCTGACTAAG  450
      ||||||||||||||||||||||||||||||| |||| |||||||||||||
seq2  ATTGCCTCTTGGTCATGATGTTTTGTACAAG-ATAC-AACCCTGACTAAG  448

seq1  ACACGCCCCTTCTCTCAGAACCTCCTCCATGCTGAGGCTGGTCCTTGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGCCCCTTCTCTCAGAACCTCCTCCATGCTGAGGCTGGTCCTTGGCA  498

seq1  ACAAGGGAAGTCTGCCCGTTCCCCTCCACACTGAGGCTTTGGGATCCGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGGAAGTCTGCCCGTTCCCCTCCACACTGAGGCTTTGGGATCCGTG  548

seq1  ACATACTATGCCGATGTCAAGGATATACATGCACTGAGGACTGCACACAC  600
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACATACTATGCCGATGTCAAGGATATACATGCACTGA-GACTGCACACAC  597

seq1  TCAGGGCTTCCTTCACACCCCACAC-CTAGAATTAAGCAAGGAAGAATGA  649
      ||||||||||||||||||||| ||| |||||||| |||||||| || || 
seq2  TCAGGGCTTCCTTCACACCCC-CACACTAGAATT-AGCAAGGAGGATTG-  644

seq1  ATTCAGACCAGGCCAGATCTCT-TTTTACTTCCTTCTATGGTGTTAAATT  698
      ||| ||||||||| | |||||| |||||| ||||||||||| ||||||||
seq2  ATTTAGACCAGGCTA-ATCTCTCTTTTAC-TCCTTCTATGGGGTTAAATT  692

seq1  TCTGTG  704
      ||||||
seq2  TCTGTG  698


seq1: chr13_5678900_5679997
seq2: B6Ng01-152B14.g_70_1160 (reverse)

seq1  TTCCCTTGTGAGTAAATACTGACAATTCCTGAAAATAACCTTAAGATTAA  50
      |||||||| |||||||||||||||    |||||||||||||| ||| |||
seq2  TTCCCTTGGGAGTAAATACTGACA---TCTGAAAATAACCTTTAGA-TAA  46

seq1  GGGTTATGATCACTAACTATTAGATTAGATTTCGAAACAAAATTGTTTCA  100
      || ||||||||||| ||||||||| |||||||||||||||||||||||||
seq2  GGTTTATGATCACT-ACTATTAGA-TAGATTTCGAAACAAAATTGTTTCA  94

seq1  GTGGTTTGAGTCATTTCCTGTACCTGAATTATAGGCTATGAACCGTTTGC  150
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GTGGTTTGAGTCATTTCCTGTACCTGAA-TATAGGCTATGAACCGTTTGC  143

seq1  ATACATGGTTGTCAACTGCTTATACAAAGGGCAATTCCATGCCAAAATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATGGTTGTCAACTGCTTATACAAAGGGCAATTCCATGCCAAAATAT  193

seq1  GCTTCCATTTATGTTTCTTCTTTAATCCTGTCTCCTTGGAGAGTGTAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCATTTATGTTTCTTCTTTAATCCTGTCTCCTTGGAGAGTGTAAGC  243

seq1  TCTAGTAAAATGAATGGTCCTTGAACTTGAATAGAGCAGCACCATCAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTAAAATGAATGGTCCTTGAACTTGAATAGAGCAGCACCATCAGTA  293

seq1  GAACAGCATATATATGTATATATACCTTATAAAAGGTATGTTTCCATCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGCATATATATGTATATATACCTTATAAAAGGTATGTTTCCATCAC  343

seq1  ATATCCTCAGCCCTCTTCCAATAGTAGCCAGGATGATGTTTTATGCCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCTCAGCCCTCTTCCAATAGTAGCCAGGATGATGTTTTATGCCTCA  393

seq1  GTTTCCAGGCTTCTGACTTTATTTTTCCCTAAAATCGTCCACTTGGAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCAGGCTTCTGACTTTATTTTTCCCTAAAATCGTCCACTTGGAACT  443

seq1  TGCATCTAGTGCCAGGACAGATCTTTCATAAGATGTGGTGAGCACAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTAGTGCCAGGACAGATCTTTCATAAGATGTGGTGAGCACAGAAG  493

seq1  AACTGGCTACCGAAGATGGCAAGAGGATGCCTATTGCTGGAATGAGACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGCTACCGAAGATGGCAAGAGGATGCCTATTGCTGGAATGAGACAC  543

seq1  AGCTCCTTTTGTGATTCATTAAGCAGAAAGATGATATATTTGGATGTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTTTTGTGATTCATTAAGCAGAAAGATGATATATTTGGATGTTTT  593

seq1  ATTGTAGAGCAAATCTACTGCACTGCATCAAAAATTTTCTTGAAAACTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAGAGCAAATCTACTGCACTGCATCAAAAATTTTCTTGAAAACTAC  643

seq1  ACATGAGACAAATTGTATCTGAGAAGTCAAGAAACTTGATAAGCTTCTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAGACAAATTGTATCTGAGAAGTCAAGAAACTTGATAAGCTTCTAG  693

seq1  AAATCCTGTAGTGACCTAACACTTTTCATTTCCTATGGGTGTGGTTTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTGTAGTGACCTAACACTTTTCATTTCCTATGGGTGTGGTTTTGA  743

seq1  TCATCAGCTCCAGCTCTGTGAAAAGGCATGAAGGCTCGTGTTTAGTGACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAGCTCCAGCTCTGTGAAAAGGCATGAAGGCTCGTGTTTAGTGACT  793

seq1  TACAGGGTATTTTTTGTATGCAGAATTCACAAAACAATAATGTCTTGAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGGTATTTTTTGTATGCAGAATTCACAAAACAATAATGTCTTGAGA  843

seq1  AGTTTAACTGTAAATTTGTTCATTTCTACAGTTGGATATGAAGGTTTTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAACTGTAAATTTGTTCATTTCTACAGTTGGATATGAAGGTTTTTA  893

seq1  AGCACAGATAAATCAAACTCCATATTCTTTTACATCTTTGAGTAGGATGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGATAAATCAAACTCCATATTCTTTTACATCTTTGAGTAGGATGG  943

seq1  CTACATATAGAGTGTCTAAAGAAATTTAAAACTAAAATCCTTTGCACATA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATATAGAGTGTCTAAAGAAATTTAAAACTAAAATCCTTTGCACATA  993

seq1  CTCTAATTTATAAAAGGATAAAGTCCAATTTGCAAAGTCACCAGTCTCCT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAATTTATAAAAGGATAAAGTCCAATTTGCAAAGTCACCAGTCTCCT  1043

seq1  GTAGTGGCAGAAACATACCTGAGAGCAAGCATGACTCATGCTGAATTC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGGCAGAAACATACCTGAGAGCAAGCATGACTCATGCTGAATTC  1091


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