BAC Information

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BAC

Clone NameB6Ng01-152D03
Chromosome13 (Build37)
Map Location 65,336,042 - 65,417,825
singlet/doubletdoublet
Overlap geneENSMUSG00000074847, Zfp369, LOC100042347
Upstream geneCdc14b, 1110018J18Rik, Ctsl, Ccrk, LOC665612, 1190003K10Rik, LOC218298, Ppia-ps13_866.1, LOC238678, LOC631470, Cntnap3, EG432767, 4930458L03Rik, LOC218301, LOC628515, 4932441B19Rik, Gm274, Hiatl1, LOC100042311, Olfr465-ps1, Olfr466, Nlrp4f
Downstream geneLOC100042341, LOC665738, EG665742, LOC665750, LOC665753, EG544944, EG665767, LOC665777, EG628648, LOC665809, LOC100042404, LOC628722, LOC665851, Vmn2r-ps99, LOC628794, EG665897, LOC100041855, EG628746, LOC100042434, LOC100041892, EG665974
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152D03.bB6Ng01-152D03.g
ACCDH947829DH947830
length1,1721,166
definitionDH947829|Mus musculus domesticus DNA, BAC clone: B6Ng01-152D03, 5' end.DH947830|Mus musculus domesticus DNA, BAC clone: B6Ng01-152D03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,416,645 - 65,417,825)(65,336,042 - 65,337,217)
sequence
gaattctatggacatatacatcactctagatgaagggtctcttcataaat
tttatcaaaatatgagactaaagattatttaagtttaatatcacacacac
aaacatgcacataaaacacacacattgttctttacgtcaggtgttgaagg
tcagtgtcatttttatctcaaaatcctgtttgctgctttattttttaaat
attatttggtagtttatttttgtcattgtcattcaattgctccttttttt
atatttgctgtctccaaaacaacctttgtcccactccctgcactcctaaa
atgcacatggcctcttatttcattaattcttactgaatgtgcacatattt
gcatatacatttatatttttaaacaaaaattgtaaagactgtgtaaaatt
gcatatatttatgttttgaaaggccacatagcagtaaaatcactcttaat
gatattctgctattgataaaaatcagggtcttgatcagccaccatcagag
atctttccttctgtaatagatagaaacaaatacaaacacccttagccagt
cagttttgagaatgtcaaagactttggaacacaaattcataaatgggctg
tcttcataatatcccttgggtcaggactcaggaaatacagtggaagttta
ggtagaagtatatcggtgccagaggggattgagaacacccaccatggaaa
acaggacttctaaaacatgaaagatagatgcagatatgaagttacagaga
atgtggcagcatgcacagggcctgcatggttctgttgaaaatggggtctc
aatactcagaggggaatgaagtacatcaccattccaatccagttgatagt
catttacaaaaaaagcaatattaattgtttttatgatataaaatgctcta
tgaaatggaggatgacaccatacctgggcatctatccctgaagttgttga
agatagcatcctatatgtagaattcattttatagaaacatagtggtcaca
gatgaatgaagcaggagacattaaagttcctgtttatattaaaatgatct
aacgacttgctttcagtatgatttaaagaattcttcttatttcaagagat
gtactcaatagtagacattcacggggattggaaacttctcttagggcaaa
cttatgccagcagcgatgggaa
gaattcacacacacacacacacacacacacacaaacacaaagcaagagac
agaatatagacaaacatgcaacacatacaacaaacacacacacacaccac
agacacacacacagaaacacacaactaaaagtttgtaccacatcaggatc
ttctctttattcagatactttatctactttctaatgaatctggcatgagt
tgtgctctaaaccacaatttcaaatgatgtgcttccattttgtgtaagtt
aaagaagtttatagagtaggagcaatttgatttacatcaggatagatata
gaaattttatgttaacaccacaaaatttaggatatttgaaaaccttcact
atataatactcaaagggaggacaggccaaaaagaaataagaaaacaggac
catagagaagccatctgacaagtgtcactatttgatgttgggaaaggcct
atgtgctgttctcactgtatgtatttagtgatacactgtgatccaggatg
atctcaaactcattgtatcctgcctgaagatattcttcagtgctttttct
ttctgctccaactcctgggtgctggggttataagaatgggcactaagtct
aattttacagtactgtgaatcagaccaggcctttacacacattaaacaaa
aactctacaaattatcattcctatcaatatcattttaaattaaataagag
tgcagagaaaagagtcccctgaggagcagtgcacataataaaaactacac
tggcaaggaggatgacagaaaacacttttatggaacataacaattaaaat
aacatttatttaataagaaaaataataatacatgggtgtccactctgctg
aatgtctttgcactacatgcatacaatttccacagaggtgggaagcaggg
catcagattctaccacaatttgagtaaagagtttttgtagctgtcacgtg
aggcctctgagacggtaacaaacgttctatgggaggacacacctcttttg
ccagactacactgacctctggtggcttccaaccattgtgctggatcactc
ccagtcaagagaagaaatttcgggagctttaatgacaagtactgagtagc
catgccaatttggctatctgacatcacgcaggccttcggtgattagaatc
aagcacagtatcaccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_65416645_65417825
seq2: B6Ng01-152D03.b_44_1215 (reverse)

seq1  TTCCCATCTGCTGCTGGGCATAAGGTTTGCCCTTAAGAGTAGTTTCAATA  50
      |||||||| |||||| ||||||| |||||||| |||||| |||||| |  
seq2  TTCCCATC-GCTGCT-GGCATAA-GTTTGCCC-TAAGAGAAGTTTCCAAT  46

seq1  CCCCGTGAATGTCCTACTATTGAGTACATCTCTTGAAATAAG-AGATTCT  99
      |||||||||||| ||||||||||||||||||||||||||||| ||| |  
seq2  CCCCGTGAATGT-CTACTATTGAGTACATCTCTTGAAATAAGAAGAATTC  95

seq1  TTTAAATCATACCTGAAAGCAAGTCGTTTAGATCATTTTTAATATAAACA  149
      ||||||||||| |||||||||||||| |||||||| ||||||||||||||
seq2  TTTAAATCATA-CTGAAAGCAAGTCG-TTAGATCA-TTTTAATATAAACA  142

seq1  GGAACTTTAATGTCTCCTGCTTCATTCATCTTGTGACCACTATGTTTCTA  199
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GGAACTTTAATGTCTCCTGCTTCATTCATC-TGTGACCACTATGTTTCTA  191

seq1  TAAAATGAATTCTACATATAGGATGCTATCTTCAACAACTTCATGGGATA  249
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TAAAATGAATTCTACATATAGGATGCTATCTTCAACAACTTCA-GGGATA  240

seq1  GATGCCCAGGTATGGTGTCATCCTCCATTTCATAGAGCATTTTATATCAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCCAGGTATGGTGTCATCCTCCATTTCATAGAGCATTTTATATCAT  290

seq1  AAAAACAATTAATATTGCTTTTTTTGTAAATGACTATCAACTGGATTGGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAATTAATATTGCTTTTTTTGTAAATGACTATCAACTGGATTGGA  340

seq1  ATGGTGATGTACTTCATTCCCCTCTGAGTATTGAGACCCCATTTTCAACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGATGTACTTCATTCCCCTCTGAGTATTGAGACCCCATTTTCAACA  390

seq1  GAACCATGCAGGCCCTGTGCATGCTGCCACATTCTCTGTAACTTCATATC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCATGCAGGCCCTGTGCATGCTGCCACATTCTCTGTAACTTCATATC  440

seq1  TGCATCTATCTTTCATGTTTTAGAAGTCCTGTTTTCCATGGTGGGTGTTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTATCTTTCATGTTTTAGAAGTCCTGTTTTCCATGGTGGGTGTTC  490

seq1  TCAATCCCCTCTGGCACCGATATACTTCTACCTAAACTTCCACTGTATTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCCCCTCTGGCACCGATATACTTCTACCTAAACTTCCACTGTATTT  540

seq1  CCTGAGTCCTGACCCAAGGGATATTATGAAGACAGCCCATTTATGAATTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGTCCTGACCCAAGGGATATTATGAAGACAGCCCATTTATGAATTT  590

seq1  GTGTTCCAAAGTCTTTGACATTCTCAAAACTGACTGGCTAAGGGTGTTTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCCAAAGTCTTTGACATTCTCAAAACTGACTGGCTAAGGGTGTTTG  640

seq1  TATTTGTTTCTATCTATTACAGAAGGAAAGATCTCTGATGGTGGCTGATC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTTTCTATCTATTACAGAAGGAAAGATCTCTGATGGTGGCTGATC  690

seq1  AAGACCCTGATTTTTATCAATAGCAGAATATCATTAAGAGTGATTTTACT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCCTGATTTTTATCAATAGCAGAATATCATTAAGAGTGATTTTACT  740

seq1  GCTATGTGGCCTTTCAAAACATAAATATATGCAATTTTACACAGTCTTTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGTGGCCTTTCAAAACATAAATATATGCAATTTTACACAGTCTTTA  790

seq1  CAATTTTTGTTTAAAAATATAAATGTATATGCAAATATGTGCACATTCAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTTGTTTAAAAATATAAATGTATATGCAAATATGTGCACATTCAG  840

seq1  TAAGAATTAATGAAATAAGAGGCCATGTGCATTTTAGGAGTGCAGGGAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATTAATGAAATAAGAGGCCATGTGCATTTTAGGAGTGCAGGGAGT  890

seq1  GGGACAAAGGTTGTTTTGGAGACAGCAAATATAAAAAAAGGAGCAATTGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAAAGGTTGTTTTGGAGACAGCAAATATAAAAAAAGGAGCAATTGA  940

seq1  ATGACAATGACAAAAATAAACTACCAAATAATATTTAAAAAATAAAGCAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAATGACAAAAATAAACTACCAAATAATATTTAAAAAATAAAGCAG  990

seq1  CAAACAGGATTTTGAGATAAAAATGACACTGACCTTCAACACCTGACGTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGGATTTTGAGATAAAAATGACACTGACCTTCAACACCTGACGTA  1040

seq1  AAGAACAATGTGTGTGTTTTATGTGCATGTTTGTGTGTGTGATATTAAAC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAATGTGTGTGTTTTATGTGCATGTTTGTGTGTGTGATATTAAAC  1090

seq1  TTAAATAATCTTTAGTCTCATATTTTGATAAAATTTATGAAGAGACCCTT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAATCTTTAGTCTCATATTTTGATAAAATTTATGAAGAGACCCTT  1140

seq1  CATCTAGAGTGATGTATATGTCCATAGAATTC  1181
      ||||||||||||||||||||||||||||||||
seq2  CATCTAGAGTGATGTATATGTCCATAGAATTC  1172

seq1: chr13_65336042_65337217
seq2: B6Ng01-152D03.g_67_1232

seq1  GAATTCACACACACACACACACACACACACACAAACACAAAGCAAGAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACACACACACACACACACACACACAAACACAAAGCAAGAGAC  50

seq1  AGAATATAGACAAACATGCAACACATACAACAAACACACACACACACCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATAGACAAACATGCAACACATACAACAAACACACACACACACCAC  100

seq1  AGACACACACACAGAAACACACAACTAAAAGTTTGTACCACATCAGGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACACACACAGAAACACACAACTAAAAGTTTGTACCACATCAGGATC  150

seq1  TTCTCTTTATTCAGATACTTTATCTACTTTCTAATGAATCTGGCATGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTTATTCAGATACTTTATCTACTTTCTAATGAATCTGGCATGAGT  200

seq1  TGTGCTCTAAACCACAATTTCAAATGATGTGCTTCCATTTTGTGTAAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTCTAAACCACAATTTCAAATGATGTGCTTCCATTTTGTGTAAGTT  250

seq1  AAAGAAGTTTATAGAGTAGGAGCAATTTGATTTACATCAGGATAGATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGTTTATAGAGTAGGAGCAATTTGATTTACATCAGGATAGATATA  300

seq1  GAAATTTTATGTTAACACCACAAAATTTAGGATATTTGAAAACCTTCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTTATGTTAACACCACAAAATTTAGGATATTTGAAAACCTTCACT  350

seq1  ATATAATACTCAAAGGGAGGACAGGCCAAAAAGAAATAAGAAAACAGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATACTCAAAGGGAGGACAGGCCAAAAAGAAATAAGAAAACAGGAC  400

seq1  CATAGAGAAGCCATCTGACAAGTGTCACTATTTGATGTTGGGAAAGGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAGAAGCCATCTGACAAGTGTCACTATTTGATGTTGGGAAAGGCCT  450

seq1  ATGTGCTGTTCTCACTGTATGTATTTAGTGATACACTGTGATCCAGGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCTGTTCTCACTGTATGTATTTAGTGATACACTGTGATCCAGGATG  500

seq1  ATCTCAAACTCATTGTATCCTGCCTGAAGATATTCTTCAGTGCTTTTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAAACTCATTGTATCCTGCCTGAAGATATTCTTCAGTGCTTTTTCT  550

seq1  TTCTGCTCCAACTCCTGGGTGCTGGGGTTATAAGAATGGGCACTAAGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTCCAACTCCTGGGTGCTGGGGTTATAAGAATGGGCACTAAGTCT  600

seq1  AATTTTACAGTACTGTGAATCAGACCAGGCCTTTACACACATTAAACAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTACAGTACTGTGAATCAGACCAGGCCTTTACACACATTAAACAAA  650

seq1  AACTCTACAAATTATCATTCCTATCAATATCATTTTAAATTAAATAAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTACAAATTATCATTCCTATCAATATCATTTTAAATTAAATAAGAG  700

seq1  TGCAGAGAAAAGAGTCCCCTGAGGAGCAGTGCACATAATAAAAACTACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGAAAAGAGTCCCCTGAGGAGCAGTGCACATAATAAAAACTACAC  750

seq1  TGGCAAGGAGGATGACAGAAAACACTTTTATGGAACATAACAATTAAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAGGAGGATGACAGAAAACACTTTTATGGAACATAACAATTAAAAT  800

seq1  AACATTTATTTAATAAGAAAAATTAATAATACATGGGTGTCCACTCTGCT  850
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AACATTTATTTAATAAGAAAAA-TAATAATACATGGGTGTCCACTCTGCT  849

seq1  GAATGTCTTTGCACTACATGCATACAATTTCCACAGAGGTGGGAAGCA-G  899
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GAATGTCTTTGCACTACATGCATACAATTTCCACAGAGGTGGGAAGCAGG  899

seq1  GCATCAGATTCTACCACAATTTGAGTTAAAGAG-TTTTGTAGCTGTCACG  948
      ||||||||||||||||||||||||| ||||||| ||||||||||||||||
seq2  GCATCAGATTCTACCACAATTTGAG-TAAAGAGTTTTTGTAGCTGTCACG  948

seq1  TGAGGCCTCTGAGACGGTAACAAACGTTCTTATTGGAGAACACACCTCTT  998
      ||||||||||||||||||||||||||||| ||| |||| |||||||||||
seq2  TGAGGCCTCTGAGACGGTAACAAACGTTC-TATGGGAGGACACACCTCTT  997

seq1  TTGCCCAGACTACACTTGACTCTTGT-GCTTCCAACCAATTGTGCTGGAT  1047
      ||| ||||||||||||   |||| || |||||||||| ||||||||||||
seq2  TTG-CCAGACTACACTGACCTCTGGTGGCTTCCAACC-ATTGTGCTGGAT  1045

seq1  CACTCCCAGTCAAGAGAGAAAATTCTGGAAGCCTTTAGTGACAAGTACTT  1097
      |||||||||||||||||  |||||  || || ||||| |||||||||| |
seq2  CACTCCCAGTCAAGAGAAGAAATTTCGGGAG-CTTTAATGACAAGTAC-T  1093

seq1  GAGGTAGGCATGCAAATTGTCTTATCCTGACATCCACGCAAGCCTTCTGT  1147
      || |||| ||||| ||||    ||| ||||||| |||||| |||||| ||
seq2  GA-GTAGCCATGCCAATTTGGCTAT-CTGACAT-CACGCAGGCCTTCGGT  1140

seq1  GAGTTTAGGATCCAGCCACAGTATCACCG  1176
      ||  |||| ||| || |||||||||||||
seq2  GA--TTAGAATCAAG-CACAGTATCACCG  1166