BAC Information

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BAC

Clone NameB6Ng01-152L20
Chromosome14 (Build37)13 (Build37)
Map Location 84,763,227 - 84,763,30188,830,868 - 88,831,076
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100043773, LOC100043279, LOC100043775, LOC100043776, LOC100043280, LOC100043285
Downstream genePcdh17, 9630013A20Rik, LOC629794
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152L20.bB6Ng01-152L20.g
ACCDH948239DH948240
length888209
definitionDH948239|Mus musculus domesticus DNA, BAC clone: B6Ng01-152L20, 5' end.DH948240|Mus musculus domesticus DNA, BAC clone: B6Ng01-152L20, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(84,763,227 - 84,763,301)(88,830,868 - 88,831,076)
sequence
gaattcctacacaatcctttgctggcgtgttaattagcacatctgttata
gaaaaaactcttatgtgtaaaacctggacaaaacctacagacactctaag
ggaaaccaaataatatgcagatggacatctcccttcatgttccttatagt
actattaacaagagatatgaagtgatgaaacagccaattttagtgtttgt
aaggtgatgaatagattataaaaatgaagtgtaatacaagttagccataa
aagataatgaatttgtgctgtgtgtgataagagagatgaatttagagatc
attagattaacttaaataagtcatagacagaaaagaatggctgaattgct
tcactcatgttcagatagttgaagttgagagtataactatggttagcaga
ggctgaagagaccaggggaagagtaaactgagggaaggttcgccagtgaa
aaccatataacagtgagaaaacagaaatatgtttcgtatgaacttgcata
gaagacaaagtatagataatagtatattgcagatcccaaaagcagtagaa
agaatgtttgtatgttttctccaagaaaatatgataaatgtttgagaata
tatatatattatatatatatatatatatatataatgtttgagaatatata
tattatacatattcataatatatatatttttacatatatattatgtataa
tatatattctgatttacaaattatataattttctaagtgttttggagcat
ctaaaaaaaggcacataattgtgttagattttttgtaaacttttaagaat
taaagttctaatttcatttgcaatcttgactttctaataattgtccatat
atatatatatatgtatatatatatatatatatatatac
aaagttcaacaaaaatattcttcagaacaagcctggaacctctcaaagag
catcaaatgctcttcaccactaaagcataactccacaatcttggcatgat
gaggtaattgctgcctagtactctgagaatgtgggctaagagtttaatga
ctgggttactttctgtgtgcatgtgtttgtgtgtgtgtgtatgtgtgtgt
gtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_84763227_84763301
seq2: B6Ng01-152L20.b_652_932 (reverse)

seq1  --------------------------------------------------  0
                                                        
seq2  TATATATATATATATATATATATACATATATATATATATATGGACAATTA  50

seq1  --------------------------------------------------  0
                                                        
seq2  TTAGAAAGTCAAGATTGCAAATGAAATTAGAACTTTAATTCTTAAAAGTT  100

seq1  --------------------------------------------------  0
                                                        
seq2  TACAAAAAATCTAACACAATTATGTGCCTTTTTTTAGATGCTCCAAAACA  150

seq1  --------------------------------------TAT-----ATAT  7
                                            |||     ||||
seq2  CTTAGAAAATTATATAATTTGTAAATCAGAATATATATTATACATAATAT  200

seq1  ATTTTTGAATATATATATA-TATACATATATAT-ATATATATA-------  48
      || | | || ||||||||| |||  |||| ||| |||||||||       
seq2  ATATGTAAAAATATATATATTATGAATATGTATAATATATATATTCTCAA  250

seq1  ----TATATATATATATATATATATATAATA  75
          |||||||||||||||||||||||||||
seq2  ACATTATATATATATATATATATATATAATA  281

seq1: chr13_88830868_88831076
seq2: B6Ng01-152L20.g_75_283

seq1  AAAGTTCAACAAAAATATTCTTCAGAACAAGCCTGGAACCTCTCAAAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTCAACAAAAATATTCTTCAGAACAAGCCTGGAACCTCTCAAAGAG  50

seq1  CATCAAATGCTCTTCACCACTAAAGCATAACTCCACAATCTTGGCATGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAATGCTCTTCACCACTAAAGCATAACTCCACAATCTTGGCATGAT  100

seq1  GAGGTAATTGCTGCCTAGTACTCTGAGAATGTGGGCTAAGAGTTTAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAATTGCTGCCTAGTACTCTGAGAATGTGGGCTAAGAGTTTAATGA  150

seq1  CTGGGTTACTTTCTGTGTGCATGTGTTTGTGTGTGTGTGTATGTGTGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTACTTTCTGTGTGCATGTGTTTGTGTGTGTGTGTATGTGTGTGT  200

seq1  GTGTGTGTG  209
      |||||||||
seq2  GTGTGTGTG  209