BAC Information

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BAC

Clone NameB6Ng01-153C14
Chromosome13 (Build37)
Map Location 69,770,080 - 69,876,167
singlet/doubletdoublet
Overlap geneNsun2, LOC100042260, 3110006E14Rik
Upstream geneAdcy2, LOC666205, LOC218332, Pols, A530095I07Rik, Srd5a1
Downstream gene4930547H16Rik, Med10, EG620143, LOC100042291, 4930520P13Rik, EG633042, BC018507, EG620473, Adamts16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153C14.bB6Ng01-153C14.g
ACCDH948550DH948551
length1,070363
definitionDH948550|Mus musculus domesticus DNA, BAC clone: B6Ng01-153C14, 5' end.DH948551|Mus musculus domesticus DNA, BAC clone: B6Ng01-153C14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,770,080 - 69,771,153)(69,875,799 - 69,876,167)
sequence
gaattcttgttaaatctcacttttaacttacaggtcattaacactgggat
aaaagtctggtgtcgaaataacagtggtgaagaattcgattgtgcattcc
gtttggcacaggaggtaatttagaaagggtttcaaagttctagccatggt
taatgtgaaatagccagagaggagccttctggtgtgccactcaagtttag
tatctcagagttactgaattcctccagggccttggtttctttggagcctt
cagtcaagtcatgaaccacacaaggcagcccttgtccttaaggaatcatg
gatcatagtgctctttcttggctcttacagggaatatatacattgtatcc
atttatcaattcaagaatcatcactgtatcaatggaagacgtgaagacac
tgttgacccaggagaacccattctttagaaaactgagcagtgaggcctac
agtcaagtcaaggaccttggtgagtaaagggatccaagacgctggccagc
ctgtattcctaacatgaggactgcagatgacagctgcacatgcttcactc
agtcctctgcatgcctcacaccctcagatttgaccagtcgtggattgagg
ataactgagaggaaaaacagtcctatctggcaggggatgggctcagttgg
cacagggttccttcagcatgctcagccctgcgtgaactgtgcatgcctgt
agttctaatacttaccaggatcagcaattcaaggtcatgcttggctacac
agcaagtaatacggaataacaagtgttgctagagcacccacaatcagatg
gagttcagataataactgctgacaggacagtcactcccaaagggatttta
agtcacttagagataacctttcagagactgtggtgggcttagtgatgtgc
agtgccatttatggtaaagacctgagcccttttgagggtttttgccttgt
cctcatggaaccccaacttgtacttggcctgaccccttaagctgagctgg
ccatctaaccagcagtcttgggtgcactgtcctcttacaactctccaact
ccagggttcgtttcccgtgg
tcattttctttaaaaacaccccccaatgacctccacgtgtgctttctaca
gtcagcttatcagaagcaatcatttctttcccggtgcctgcctctgcccc
tttcgtggcagggtacaccacactcatcaaatgcagctcattctgcccat
tcctttcaaggctgaaccccgcaattaaaaacaaacaaacaaacaaacaa
aaaacaacttcaacaaaaaggtcactgcatcctgagttatcaggagtcag
gctcctagcaggaggacccaggggctctagagcaggtgctgtgacgccag
tttatgaaacactggcctaactacagtgtgagtgtgtgtgtgtgtgagtg
tgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_69770080_69771153
seq2: B6Ng01-153C14.b_44_1113

seq1  GAATTCTTGTTAAATCTCACTTTTAACTTACAGGTCATTAACACTGGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTTAAATCTCACTTTTAACTTACAGGTCATTAACACTGGGAT  50

seq1  AAAAGTCTGGTGTCGAAATAACAGTGGTGAAGAATTCGATTGTGCATTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTCTGGTGTCGAAATAACAGTGGTGAAGAATTCGATTGTGCATTCC  100

seq1  GTTTGGCACAGGAGGTAATTTAGAAAGGGTTTCAAAGTTCTAGCCATGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGCACAGGAGGTAATTTAGAAAGGGTTTCAAAGTTCTAGCCATGGT  150

seq1  TAATGTGAAATAGCCAGAGAGGAGCCTTCTGGTGTGCCACTCAAGTTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTGAAATAGCCAGAGAGGAGCCTTCTGGTGTGCCACTCAAGTTTAG  200

seq1  TATCTCAGAGTTACTGAATTCCTCCAGGGCCTTGGTTTCTTTGGAGCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCAGAGTTACTGAATTCCTCCAGGGCCTTGGTTTCTTTGGAGCCTT  250

seq1  CAGTCAAGTCATGAACCACACAAGGCAGCCCTTGTCCTTAAGGAATCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAAGTCATGAACCACACAAGGCAGCCCTTGTCCTTAAGGAATCATG  300

seq1  GATCATAGTGCTCTTTCTTGGCTCTTACAGGGAATATATACATTGTATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATAGTGCTCTTTCTTGGCTCTTACAGGGAATATATACATTGTATCC  350

seq1  ATTTATCAATTCAAGAATCATCACTGTATCAATGGAAGACGTGAAGACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCAATTCAAGAATCATCACTGTATCAATGGAAGACGTGAAGACAC  400

seq1  TGTTGACCCAGGAGAACCCATTCTTTAGAAAACTGAGCAGTGAGGCCTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGACCCAGGAGAACCCATTCTTTAGAAAACTGAGCAGTGAGGCCTAC  450

seq1  AGTCAAGTCAAGGACCTTGGTGAGTAAAGGGATCCAAGACGCTGGCCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAGTCAAGGACCTTGGTGAGTAAAGGGATCCAAGACGCTGGCCAGC  500

seq1  CTGTATTCCTAACATGAGGACTGCAGATGACAGCTGCACATGCTTCACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTCCTAACATGAGGACTGCAGATGACAGCTGCACATGCTTCACTC  550

seq1  AGTCCTCTGCATGCCTCACACCCTCAGATTTGACCAGTCGTGGATTGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTCTGCATGCCTCACACCCTCAGATTTGACCAGTCGTGGATTGAGG  600

seq1  ATAACTGAGAGGAAAAACAGTCCTATCTGGCAGGGGATGGGCTCAGTTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTGAGAGGAAAAACAGTCCTATCTGGCAGGGGATGGGCTCAGTTGG  650

seq1  CACAGGGTTCCTTCAGCATGCTCAGCCCTGCGTGAACTGTGCATGCCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGGTTCCTTCAGCATGCTCAGCCCTGCGTGAACTGTGCATGCCTGT  700

seq1  AGTTCTAATACTTACCAGGATCAGCAATTCAAGGTCATGCTTGGCTACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTAATACTTACCAGGATCAGCAATTCAAGGTCATGCTTGGCTACAC  750

seq1  AGCAAGTAATACGGAATAACAAGTGTTGCTAGAGCACCCACAATCAGATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTAATACGGAATAACAAGTGTTGCTAGAGCACCCACAATCAGATG  800

seq1  GAGTTCAGGATAATAACTGCTGACAGGACAGTCACTCCCAAAGGGATTTT  850
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCA-GATAATAACTGCTGACAGGACAGTCACTCCCAAAGGGATTTT  849

seq1  AAGTCACTTAGAGATAACCTTTCAGAGACTGTGGTGGGCTTAGTGATGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCACTTAGAGATAACCTTTCAGAGACTGTGGTGGGCTTAGTGATGTG  899

seq1  CAGTGCCATTTATGGTAAAGACCTGAGCCCTTTTGAGGGTTCTTTGCCTT  950
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CAGTGCCATTTATGGTAAAGACCTGAGCCCTTTTGAGGGTT-TTTGCCTT  948

seq1  GTCCCTCATGGAACCCCAACTTGTACTTGGCCTGACCCCTTAAGCTGAGC  1000
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GT-CCTCATGGAACCCCAACTTGTACTTGGCCTGACCCCTTAAGCTGAGC  997

seq1  TGGCCCATCAGACCAGCAGTCTTGGTTGCACTGTCCTCTTACAACTCCCA  1050
      ||| |||||  |||||||||||||| ||||||||||||||||||||| | 
seq2  TGG-CCATCTAACCAGCAGTCTTGGGTGCACTGTCCTCTTACAACTCTCC  1046

seq1  AACTCCAGTGTTCGTTCTCCGTGG  1074
      |||||||| |||||||  ||||||
seq2  AACTCCAGGGTTCGTTTCCCGTGG  1070

seq1: chr13_69875799_69876167
seq2: B6Ng01-153C14.g_69_437 (reverse)

seq1  ACACACACACACACACTCACACACACACACACTCACACTGTAGTTAGGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACTCACACACACACACACTCACACTGTAGTTAGGCC  50

seq1  AGTGTTTCATAAACTGGCGTCACAGCACCTGCTCTAGAGCCCCTGGGTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTCATAAACTGGCGTCACAGCACCTGCTCTAGAGCCCCTGGGTCC  100

seq1  TCCTGCTAGGAGCCTGACTCCTGATAACTCAGGATGCAGTGACCTTTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCTAGGAGCCTGACTCCTGATAACTCAGGATGCAGTGACCTTTTTG  150

seq1  TTGAAGTTGTTTTTTGTTTGTTTGTTTGTTTGTTTTTAATTGCGGGGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTTGTTTTTTGTTTGTTTGTTTGTTTGTTTTTAATTGCGGGGTTC  200

seq1  AGCCTTGAAAGGAATGGGCAGAATGAGCTGCATTTGATGAGTGTGGTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTGAAAGGAATGGGCAGAATGAGCTGCATTTGATGAGTGTGGTGTA  250

seq1  CCCTGCCACGAAAGGGGCAGAGGCAGGCACCGGGAAAGAAATGATTGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCCACGAAAGGGGCAGAGGCAGGCACCGGGAAAGAAATGATTGCTT  300

seq1  CTGATAAGCTGACTGTAGAAAGCACACGTGGAGGTCATTGGGGGGTGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAAGCTGACTGTAGAAAGCACACGTGGAGGTCATTGGGGGGTGTTT  350

seq1  TTAAAGAAAATGAGAATTC  369
      |||||||||||||||||||
seq2  TTAAAGAAAATGAGAATTC  369